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The map label for this gene is ydfF [H]

Identifier: 83720656

GI number: 83720656

Start: 1893092

End: 1893964

Strand: Reverse

Name: ydfF [H]

Synonym: BTH_I1682

Alternate gene names: 83720656

Gene position: 1893964-1893092 (Counterclockwise)

Preceding gene: 161723165

Following gene: 83720269

Centisome position: 49.72

GC content: 72.85

Gene sequence:

>873_bases
TTGCCCACCCGGCCGCCCGCCCCCGCCCAAGCGCGAAACAACGCCGCATCCCGCCGCCTCAGCCAGGCAACACGCCCGCA
CATTCGACATTTCGGCGCAACGCGAAACATCGAATGCCATCCGCGCCTACACTCGAACCGTGTCCTTCCCGAGGGTTCCC
CGATGTCCGATTCCGATCGCCACCACCATTTCCCCGGCTTGAGCCACCTCGGCGCGCTGCTCGCCGATCCGGGACGCGCC
GCGATGCTCTGGGCGCTGATGGACGGCAGCGCGCGCCCCGCGGGCGAGCTGACGATGATCGCCGGGCTGTCGCCGTCGGC
GGCGAGCGCGCATCTCGCCCGGCTCGCGGACGGCGGCCTCCTCGCGCTCGACGTGCGCGGCCGCCATCGCTATTACCGGA
TCGCTTCGCCCGATGTCGCCGCGGCGATCGAGGCGCTCGCGAACGTCGCGCAGGCGGCCGCGCCGCAGCGCCCGATCCCG
CAACCGGCGCGCACGGTTCCGCCCGACATGCGCTATGCACGCACCTGCTATGACCACATGGCGGGCGAGCTCGCGGTGCA
GGTATTCGAGCGGCTGATGGCGCGCAGCTGGCTGACGGCGGCCAACGGCGTGCTCGACGCAAGCGCCGCGGGCGCCGCGC
AGTTCGCGCGATGGGGCATCGACATCGGCGGCCAGCGCGCGAAGCGCCGGCGCTTCGCGTGCACATGCCCGGACTGGAGC
GAGCGCCGTCCGCACCTGGGCGGCGCGCTCGGCGCGGCGCTCCTCGAGCGCTTCTGCCAATGCGGCTGGATCGAGCATGC
GGCCAAGCCGCGCGTGCTGCGCGTGACGCCCGCCGGCCAGCGCGAATTCGACGCCTTGCTTACCGGCGGATGA

Upstream 100 bases:

>100_bases
GACGTCGCATTTTACGCGCGCCGCCGCGGCAAGCGCAGCAACCGGCGGCGGCGAGCTCGCGCCTCGCCCACCCCGCGATC
GGGCGTCCGGCCGTTCGGCC

Downstream 100 bases:

>100_bases
CGCCCACTTTCGTCGGTCTGACGAATTGCGCCGCGCCGACAACTCTTGTTACACGCGCATCAAATCGCATAACAAAACCG
ATGTCACTGAAACATGCCGA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPTRPPAPAQARNNAASRRLSQATRPHIRHFGATRNIECHPRLHSNRVLPEGSPMSDSDRHHHFPGLSHLGALLADPGRA
AMLWALMDGSARPAGELTMIAGLSPSAASAHLARLADGGLLALDVRGRHRYYRIASPDVAAAIEALANVAQAAAPQRPIP
QPARTVPPDMRYARTCYDHMAGELAVQVFERLMARSWLTAANGVLDASAAGAAQFARWGIDIGGQRAKRRRFACTCPDWS
ERRPHLGGALGAALLERFCQCGWIEHAAKPRVLRVTPAGQREFDALLTGG

Sequences:

>Translated_290_residues
MPTRPPAPAQARNNAASRRLSQATRPHIRHFGATRNIECHPRLHSNRVLPEGSPMSDSDRHHHFPGLSHLGALLADPGRA
AMLWALMDGSARPAGELTMIAGLSPSAASAHLARLADGGLLALDVRGRHRYYRIASPDVAAAIEALANVAQAAAPQRPIP
QPARTVPPDMRYARTCYDHMAGELAVQVFERLMARSWLTAANGVLDASAAGAAQFARWGIDIGGQRAKRRRFACTCPDWS
ERRPHLGGALGAALLERFCQCGWIEHAAKPRVLRVTPAGQREFDALLTGG
>Mature_289_residues
PTRPPAPAQARNNAASRRLSQATRPHIRHFGATRNIECHPRLHSNRVLPEGSPMSDSDRHHHFPGLSHLGALLADPGRAA
MLWALMDGSARPAGELTMIAGLSPSAASAHLARLADGGLLALDVRGRHRYYRIASPDVAAAIEALANVAQAAAPQRPIPQ
PARTVPPDMRYARTCYDHMAGELAVQVFERLMARSWLTAANGVLDASAAGAAQFARWGIDIGGQRAKRRRFACTCPDWSE
RRPHLGGALGAALLERFCQCGWIEHAAKPRVLRVTPAGQREFDALLTGG

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 31269; Mature: 31138

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTRPPAPAQARNNAASRRLSQATRPHIRHFGATRNIECHPRLHSNRVLPEGSPMSDSDR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
HHHFPGLSHLGALLADPGRAAMLWALMDGSARPAGELTMIAGLSPSAASAHLARLADGGL
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCE
LALDVRGRHRYYRIASPDVAAAIEALANVAQAAAPQRPIPQPARTVPPDMRYARTCYDHM
EEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
AGELAVQVFERLMARSWLTAANGVLDASAAGAAQFARWGIDIGGQRAKRRRFACTCPDWS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCEECCCCHH
ERRPHLGGALGAALLERFCQCGWIEHAAKPRVLRVTPAGQREFDALLTGG
HCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHCCC
>Mature Secondary Structure 
PTRPPAPAQARNNAASRRLSQATRPHIRHFGATRNIECHPRLHSNRVLPEGSPMSDSDR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
HHHFPGLSHLGALLADPGRAAMLWALMDGSARPAGELTMIAGLSPSAASAHLARLADGGL
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCE
LALDVRGRHRYYRIASPDVAAAIEALANVAQAAAPQRPIPQPARTVPPDMRYARTCYDHM
EEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
AGELAVQVFERLMARSWLTAANGVLDASAAGAAQFARWGIDIGGQRAKRRRFACTCPDWS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCEECCCCHH
ERRPHLGGALGAALLERFCQCGWIEHAAKPRVLRVTPAGQREFDALLTGG
HCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]