| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is murE [H]
Identifier: 83720483
GI number: 83720483
Start: 1255923
End: 1257467
Strand: Direct
Name: murE [H]
Synonym: BTH_I1113
Alternate gene names: 83720483
Gene position: 1255923-1257467 (Clockwise)
Preceding gene: 83721379
Following gene: 83719896
Centisome position: 32.97
GC content: 71.72
Gene sequence:
>1545_bases ATGAGCGCCGCGCGCAGTTCCCATCCGGCGCACCAGCAGATCGCGGCCGCGCTTGCGTGGCTGCGCGCGCACGTCGCGTC CGGCGCGCAATTGCACGCCGACACGCGCAGCCTGCAGGCGGGCGACGTGTTCGTCGCCTATGCGGTCGACGGCGCGGATA ATCGTCCGTTCATTGCCGACGCGCTCGCGCGCGGCGCGGCCGCCGTGCTGTATCAGCCCGAAGGTTTCCCGGCCGCCGGC CTCGACCCGGCGACGTCGCTCGCCGTGCCCGCGCTCGACGCGCTCGCGGGCGATATCGCGAGCGGCTGGTACGGCGATCC GAGCGACGCGATGTTCGCGGTCGGCGTGACGGGCACGAACGGCAAGACGTCGTGCACGCAATGGATCGCGGCCGCGCTCA CAGCGTTGCGCGAGCCGTGCGCGGTGATCGGCACGCTCGGCAGCGGAATGCCCGGCCAGCTCGTCCACACGGGCTTCACG ACGCCCGATGCGCCGCAACTGCAGCGCAGCCTCGCGCAACTGCGCGACGCGGGCGCTCAGGCGGTCGCGATGGAAGTCTC GTCGCATGCGCTGCATCAGGGGCGCGTGAACGGCACCGCGTTCGACGTCGCGGTGTTCACGAACCTCACGCAGGATCACC TCGATTACCACCGCACGTTCGACGCCTACGAGGCCGCGAAGGCAAAGCTCTTCGCCTGGCGCGGGCTGCATTGCGCGGTT GTCAATCGCGACGATCCGGCCGGCCGCCGCCTGCTCGCGAATCTCGTCGGCCGCGTGAGGACGATCGCGTACGGCATCGA TGCGCCGGCGCAAGGCGCCGACGCCGATCGCGAGCTCGTCGCGACGAACGTCCGCGCGACCGCGACGGGCACCGCGTTTC GCGTGACTTCGCCGTGGGGCGAAGCGGACGTCGAGGTCGGCACGCTCGGCACGTTCAACGTGAGCAATCTGCTCGCGGTG CTCGGCACGCTGCTCGCGGCCGACGTGCCGTTCGACGCGGCGCTCGCCGAAATCGAGCGGCTCGAATCGGTCAACGGCCG GATGCAGCGGCTCGGCGGCCGGCTGCAGAACGACGAGCCGCTCGTCGTCGTCGATTACGCGCACACGCCGGACGCGCTCG AGAAGACGCTCGAAGCGCTGCGCCCGATCGCGCAGGCGCGCGGCGGCGAGCTCGTCTGCATGTTCGGCTGCGGCGGCGAC CGCGACGCGACGAAGCGCCCGCTGATGGGCGCGATCGCCGAGCGGCTCGCGGACAAGGTCGTCGTGACGAGCGACAACCC GCGCAGCGAGGAGCCGCAGAAGATCATCGATCAGATCGTCGCCGGCATGCGGGACGCCGCGAACGCGCGCCGAGTCGAGG ACCGCGCGAGCGCGATCCTGCAGGCCGTGCGCGGCGCCGCGCGCGAGGACGTCGTGCTGCTCGCCGGCAAGGGGCACGAG GCGACGCAGGAGATCATGGGCAAGAAGCGTGCGTTCTCCGATCAGGATCACGCGCGCCTCGCGCTCGCCGCGCGCACGAC GCAGACTCGCGGAGGCGGCGAATGA
Upstream 100 bases:
>100_bases ATACGGCGAACGCCGCCGCTGCGCAGAAGCTGGCCGCGAATGCGCCGGCGAAACACATGATCGTGTCGAGCACGACACAC AACCGTCCTGGAGTAGTTCG
Downstream 100 bases:
>100_bases CGATGCTGACCTTGCGCGAAGCCGCAGCGATGATCCCCGGCGCGACCGTGCTCGGCGACGAGCGCGCGTCGTTCGAGCGG GTGTCGACGGACAGCCGCTC
Product: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
Products: NA
Alternate protein names: Meso-A2pm-adding enzyme; Meso-diaminopimelate-adding enzyme; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSAARSSHPAHQQIAAALAWLRAHVASGAQLHADTRSLQAGDVFVAYAVDGADNRPFIADALARGAAAVLYQPEGFPAAG LDPATSLAVPALDALAGDIASGWYGDPSDAMFAVGVTGTNGKTSCTQWIAAALTALREPCAVIGTLGSGMPGQLVHTGFT TPDAPQLQRSLAQLRDAGAQAVAMEVSSHALHQGRVNGTAFDVAVFTNLTQDHLDYHRTFDAYEAAKAKLFAWRGLHCAV VNRDDPAGRRLLANLVGRVRTIAYGIDAPAQGADADRELVATNVRATATGTAFRVTSPWGEADVEVGTLGTFNVSNLLAV LGTLLAADVPFDAALAEIERLESVNGRMQRLGGRLQNDEPLVVVDYAHTPDALEKTLEALRPIAQARGGELVCMFGCGGD RDATKRPLMGAIAERLADKVVVTSDNPRSEEPQKIIDQIVAGMRDAANARRVEDRASAILQAVRGAAREDVVLLAGKGHE ATQEIMGKKRAFSDQDHARLALAARTTQTRGGGE
Sequences:
>Translated_514_residues MSAARSSHPAHQQIAAALAWLRAHVASGAQLHADTRSLQAGDVFVAYAVDGADNRPFIADALARGAAAVLYQPEGFPAAG LDPATSLAVPALDALAGDIASGWYGDPSDAMFAVGVTGTNGKTSCTQWIAAALTALREPCAVIGTLGSGMPGQLVHTGFT TPDAPQLQRSLAQLRDAGAQAVAMEVSSHALHQGRVNGTAFDVAVFTNLTQDHLDYHRTFDAYEAAKAKLFAWRGLHCAV VNRDDPAGRRLLANLVGRVRTIAYGIDAPAQGADADRELVATNVRATATGTAFRVTSPWGEADVEVGTLGTFNVSNLLAV LGTLLAADVPFDAALAEIERLESVNGRMQRLGGRLQNDEPLVVVDYAHTPDALEKTLEALRPIAQARGGELVCMFGCGGD RDATKRPLMGAIAERLADKVVVTSDNPRSEEPQKIIDQIVAGMRDAANARRVEDRASAILQAVRGAAREDVVLLAGKGHE ATQEIMGKKRAFSDQDHARLALAARTTQTRGGGE >Mature_513_residues SAARSSHPAHQQIAAALAWLRAHVASGAQLHADTRSLQAGDVFVAYAVDGADNRPFIADALARGAAAVLYQPEGFPAAGL DPATSLAVPALDALAGDIASGWYGDPSDAMFAVGVTGTNGKTSCTQWIAAALTALREPCAVIGTLGSGMPGQLVHTGFTT PDAPQLQRSLAQLRDAGAQAVAMEVSSHALHQGRVNGTAFDVAVFTNLTQDHLDYHRTFDAYEAAKAKLFAWRGLHCAVV NRDDPAGRRLLANLVGRVRTIAYGIDAPAQGADADRELVATNVRATATGTAFRVTSPWGEADVEVGTLGTFNVSNLLAVL GTLLAADVPFDAALAEIERLESVNGRMQRLGGRLQNDEPLVVVDYAHTPDALEKTLEALRPIAQARGGELVCMFGCGGDR DATKRPLMGAIAERLADKVVVTSDNPRSEEPQKIIDQIVAGMRDAANARRVEDRASAILQAVRGAAREDVVLLAGKGHEA TQEIMGKKRAFSDQDHARLALAARTTQTRGGGE
Specific function: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan [H]
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family. MurE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786273, Length=473, Percent_Identity=45.0317124735729, Blast_Score=306, Evalue=2e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR005761 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.13 [H]
Molecular weight: Translated: 54007; Mature: 53876
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAARSSHPAHQQIAAALAWLRAHVASGAQLHADTRSLQAGDVFVAYAVDGADNRPFIAD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCCCCCHHHH ALARGAAAVLYQPEGFPAAGLDPATSLAVPALDALAGDIASGWYGDPSDAMFAVGVTGTN HHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC GKTSCTQWIAAALTALREPCAVIGTLGSGMPGQLVHTGFTTPDAPQLQRSLAQLRDAGAQ CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCC AVAMEVSSHALHQGRVNGTAFDVAVFTNLTQDHLDYHRTFDAYEAAKAKLFAWRGLHCAV EEEHHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEE VNRDDPAGRRLLANLVGRVRTIAYGIDAPAQGADADRELVATNVRATATGTAFRVTSPWG ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEEECCCEEEEECCCC EADVEVGTLGTFNVSNLLAVLGTLLAADVPFDAALAEIERLESVNGRMQRLGGRLQNDEP CCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LVVVDYAHTPDALEKTLEALRPIAQARGGELVCMFGCGGDRDATKRPLMGAIAERLADKV EEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCE VVTSDNPRSEEPQKIIDQIVAGMRDAANARRVEDRASAILQAVRGAAREDVVLLAGKGHE EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH ATQEIMGKKRAFSDQDHARLALAARTTQTRGGGE HHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCCC >Mature Secondary Structure SAARSSHPAHQQIAAALAWLRAHVASGAQLHADTRSLQAGDVFVAYAVDGADNRPFIAD CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCCCCCHHHH ALARGAAAVLYQPEGFPAAGLDPATSLAVPALDALAGDIASGWYGDPSDAMFAVGVTGTN HHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC GKTSCTQWIAAALTALREPCAVIGTLGSGMPGQLVHTGFTTPDAPQLQRSLAQLRDAGAQ CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCC AVAMEVSSHALHQGRVNGTAFDVAVFTNLTQDHLDYHRTFDAYEAAKAKLFAWRGLHCAV EEEHHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEE VNRDDPAGRRLLANLVGRVRTIAYGIDAPAQGADADRELVATNVRATATGTAFRVTSPWG ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEEECCCEEEEECCCC EADVEVGTLGTFNVSNLLAVLGTLLAADVPFDAALAEIERLESVNGRMQRLGGRLQNDEP CCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LVVVDYAHTPDALEKTLEALRPIAQARGGELVCMFGCGGDRDATKRPLMGAIAERLADKV EEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCE VVTSDNPRSEEPQKIIDQIVAGMRDAANARRVEDRASAILQAVRGAAREDVVLLAGKGHE EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH ATQEIMGKKRAFSDQDHARLALAARTTQTRGGGE HHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]