Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83720257
Identifier: 83720257
GI number: 83720257
Start: 1754350
End: 1755597
Strand: Direct
Name: 83720257
Synonym: BTH_I1553
Alternate gene names: NA
Gene position: 1754350-1755597 (Clockwise)
Preceding gene: 83720671
Following gene: 83721578
Centisome position: 46.06
GC content: 66.03
Gene sequence:
>1248_bases ATGAAAATTCGCGCGATCATGGGCGCGCTCGGCGCCGCAGGCCTGTTGTTCGGCGCTGCCGCGGCGCAAGCGGCAGAGAA TGTCACGGTGCTGCACTGGTGGACGTCGGGCGGCGAATCCAAGGCGGTCGGCGCGCTGAAGGACGACCTGCAGAAGCAGG GCTACGTCTGGAAGGACTTCGCGGTCGCGGGCGGCGCGGGCGCGGCGGCGATGACCGCGCTGAAGACGAAGGTCATCAGC GGCGACGCGCCGTCGGCCGCGCAGATCAAGGGGCCCCTCATCCAGGAGTGGGCGGACCAGGGCGTGCTCGTGAACATCGA CGCCGCCGCGGGCGACTGGAAGCAGAACCTGCCGCCCGAGATCGACAAGATCATCAAGTACAAGGGCAACACCGTCGCGG CGCCGTTCTCGGTGCACCGCGTCAACTGGCTCTACATCAACAAGGCCGCGCTCGACAAGATCGGCGCGAAGCCGCCCGCG ACGTGGCCTGAATTCTTCCAGATCGCCGACAAGCTGAAGGCGGCGGGCATCCAGCCGGTCGCGATGGGCGGCCAGCCGTG GCAGGACCTGACGCTGTGGGAAGACGTCGTGCTGTCGCAAGGCGCCGACTTCTACAAGAAGGCGCTCGTCGATCTCGACC AGAAGACGCTCACGTCGGACAAGATGCTCGACGTGTTCAACACGGTGCGCAAGATCCAAGGCTACTTCGATTCGGGCCGC AACGGCCGCGACTGGAACCTGGCAACGGCGATGGTCATCAACGGCCGCGCCGGCATGCAGTTCATGGGCGACTGGGCGAA GGGCGAGTTCGAGGCGGCCGGCAAGAAGCCGGGCAAGGACTACATCTGCGCGGCGGTGCCGGGCACGGCGAATGCGTACA CGTTCAACGTCGATTCGTTCGTGTTCTTCCAGCAGAAGGGTCAGAAGGCGGCGACGCCCGGCCAGATCGCGCTCGCGAAG ACGATCATGACGCCCGCGTTCCAGGAGCAGTTCAGCCTGCTGAAGGGTTCGATCCCGGTGCGCCTCGGCGTGAAGATGGA CAAGTTCGACGATTGCGCGAAGAAGTCCTACGCTGACGAGCAGACGGCGATCAAGTCCGGCGGCTACGTGCCGTCGCTCG CGCACGGCATGGCGCAGGGCGACGCGACGGCGGGCGCGATTTCCGACGTCGTGACGAAGTTCATGAACTCGCAGCAGGAC GCGAAGAGCGCGGTCGCCGCACTCGCGCGTGCCGCGAAGGTGAAGTAA
Upstream 100 bases:
>100_bases GCGGCTCGATTTCCCGTGTCGTTCCGTAGCAAAGCCGGCTTTCGCGCATCCGCGCGGTAAAAAGCCTGACGAATCGATCC AAATCTGGAGGAGATAACTG
Downstream 100 bases:
>100_bases CGCACGGCGCGAGCGCCCGGATGCGCGCATCGTGCGCGCCGGGCGCTTCGTGCTGCAAGCGCTGCAAACGGGCCGCGAGC CGGCCCGCGCCGTACCCGCC
Product: maltose ABC transporter periplasmic maltose-binding protein
Products: NA
Alternate protein names: Immunogenic 39 kDa protein; P39 [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGALKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS GDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPEIDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPA TWPEFFQIADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDQKTLTSDKMLDVFNTVRKIQGYFDSGR NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSFVFFQQKGQKAATPGQIALAK TIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQD AKSAVAALARAAKVK
Sequences:
>Translated_415_residues MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGALKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS GDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPEIDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPA TWPEFFQIADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDQKTLTSDKMLDVFNTVRKIQGYFDSGR NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSFVFFQQKGQKAATPGQIALAK TIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQD AKSAVAALARAAKVK >Mature_415_residues MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGALKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS GDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPEIDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPA TWPEFFQIADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDQKTLTSDKMLDVFNTVRKIQGYFDSGR NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSFVFFQQKGQKAATPGQIALAK TIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQD AKSAVAALARAAKVK
Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 44218; Mature: 44218
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGALKDDLQKQGYVWKDF CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEH AVAGGAGAAAMTALKTKVISGDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPE EECCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCHH IDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPATWPEFFQIADKLKAAGIQPV HHHHHHCCCCEEECCEEEEEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEE AMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDQKTLTSDKMLDVFNTVRKIQGYFDSGR ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSF CCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEE VFFQQKGQKAATPGQIALAKTIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADE EEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCH QTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQDAKSAVAALARAAKVK HHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGALKDDLQKQGYVWKDF CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEH AVAGGAGAAAMTALKTKVISGDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPE EECCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCHH IDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPATWPEFFQIADKLKAAGIQPV HHHHHHCCCCEEECCEEEEEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEE AMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDQKTLTSDKMLDVFNTVRKIQGYFDSGR ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSF CCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEE VFFQQKGQKAATPGQIALAKTIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADE EEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCH QTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQDAKSAVAALARAAKVK HHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9009303; 10235622 [H]