Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_007651 |
Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is bcr [H]
Identifier: 83720671
GI number: 83720671
Start: 1745758
End: 1746993
Strand: Direct
Name: bcr [H]
Synonym: BTH_I1546
Alternate gene names: 83720671
Gene position: 1745758-1746993 (Clockwise)
Preceding gene: 83720178
Following gene: 83720257
Centisome position: 45.83
GC content: 69.9
Gene sequence:
>1236_bases ATGCCTCACGTCGCAAGACGCCGGCCCGACGGCCGGCTGATCCTGTTGCTCGGCGCGCTCGCAGCGTGCGGGCCGATCGC CACCGACATGTATCTGCCGAGCCTGCCCGCGATCGCGGACGGCTTCGGCGTGACCGCCGCCGCCGCGCAGCGCACGCTGA CGAGCTTCATGGCCGGCTTTTCGATCGGCATGCTGCTCTACGGCCCGCTGTCCGATACCTATGGCCGCCGCCCCGTGCTG CTCGGCGGCATCGCGCTGTTCACGCTCGCGAGCATCGGCTGCTTCGTCGCCACGTCGATCGACATGCTGATCGTCGTCCG CTTTCTGCAGGCGTTCGGCGCGGGTGCCGCGTCAGTGCTCGCACGCGCGATCGCGCGCGACGCGCACGAGCCGTCCGACG CCGCGAAGGTGCTGTCGATGGTCGCGATCGTCACCGCGATCGGGCCGCTTCTCGCGCCGCTCATCGGCGGGCAGGTGCTG CGCTTTTCCGGCTGGCGCGGCGTGTTCGTCGTGCTCACGCTGTTCGGCGCGGTCTGCGCGACGGCCGCGTTCCTGCGCGT GCCCGAGACCTGGCCGCGCGAAAAGCGCGCGAGCTCGGCCGTGCTGAATTCGTTCGCCGCGTATGGACGCATCCTCGCCG ATCCGGTCGCATGGGGCCATATGCTGTGCGGCGGAATGGCGTTCGCGTCGATGTTCGCGTACATCACCGCGACGCCGTTC GTCTATATCGACTACTTCCACGTGTCGCCGCAGCATTACGGGCTGCTGTTCGGGCTGAACGTCGTCGGCATCATGATCGG CAATTTCCTGAACACGCGCCTCGTCGGCCGAGTCGGCTCGCTGAAGATCATCGCGGGCGCGTCGCTGCTGAGCGGCGCGG CGTCGTTCTGCGTCGCGTTCTTCGCGCTGACGGGGCTGGGCGGATTGTGGTCGATCGTCGCGAGCCTGTTCTTCGTCGTC AGCGTGGTCGGCATCCTGTCCGCGAACTGCACGACCGACCTGATGCTGCGCTATCCGCACAACGCGGGCGCCGCGGCCGC CGTGTTCGGCGCGATGCAGCTCGCGCTCGGCGCGCTCGCAAGCGTCGCGATCGGCGCGCTCGCGGACGGCACGCCGTTCG CGATGGGCGTGACGATCGGCGCGACCGGCCTGCTGTGCCTTGGCGGGCGCGTGCTCGTGCTGCGCTGGCACGGCCGGCCG GTGAAGGGCAGGCTCGGCAGCGCCGACGTCGCGTAA
Upstream 100 bases:
>100_bases CAATCTGGTCGTTTCGGCGTCGACCCGACCGGCCGCCGTCCTCCTTGCCCGCCCGTCTCGTGCGCCATCCGCGCGAGGCG GCCGCTTCCGTGGAATTCCA
Downstream 100 bases:
>100_bases CGCCGCCGGCGGGCGCGGCGAGCGGCTCAGTGCAGGATCTTGTCGAGGAATTCGCGCGCGCGCTCGGAGCGCGGCGCGGC GAAGAACGCGTCGCTCGGCG
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPHVARRRPDGRLILLLGALAACGPIATDMYLPSLPAIADGFGVTAAAAQRTLTSFMAGFSIGMLLYGPLSDTYGRRPVL LGGIALFTLASIGCFVATSIDMLIVVRFLQAFGAGAASVLARAIARDAHEPSDAAKVLSMVAIVTAIGPLLAPLIGGQVL RFSGWRGVFVVLTLFGAVCATAAFLRVPETWPREKRASSAVLNSFAAYGRILADPVAWGHMLCGGMAFASMFAYITATPF VYIDYFHVSPQHYGLLFGLNVVGIMIGNFLNTRLVGRVGSLKIIAGASLLSGAASFCVAFFALTGLGGLWSIVASLFFVV SVVGILSANCTTDLMLRYPHNAGAAAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGATGLLCLGGRVLVLRWHGRP VKGRLGSADVA
Sequences:
>Translated_411_residues MPHVARRRPDGRLILLLGALAACGPIATDMYLPSLPAIADGFGVTAAAAQRTLTSFMAGFSIGMLLYGPLSDTYGRRPVL LGGIALFTLASIGCFVATSIDMLIVVRFLQAFGAGAASVLARAIARDAHEPSDAAKVLSMVAIVTAIGPLLAPLIGGQVL RFSGWRGVFVVLTLFGAVCATAAFLRVPETWPREKRASSAVLNSFAAYGRILADPVAWGHMLCGGMAFASMFAYITATPF VYIDYFHVSPQHYGLLFGLNVVGIMIGNFLNTRLVGRVGSLKIIAGASLLSGAASFCVAFFALTGLGGLWSIVASLFFVV SVVGILSANCTTDLMLRYPHNAGAAAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGATGLLCLGGRVLVLRWHGRP VKGRLGSADVA >Mature_410_residues PHVARRRPDGRLILLLGALAACGPIATDMYLPSLPAIADGFGVTAAAAQRTLTSFMAGFSIGMLLYGPLSDTYGRRPVLL GGIALFTLASIGCFVATSIDMLIVVRFLQAFGAGAASVLARAIARDAHEPSDAAKVLSMVAIVTAIGPLLAPLIGGQVLR FSGWRGVFVVLTLFGAVCATAAFLRVPETWPREKRASSAVLNSFAAYGRILADPVAWGHMLCGGMAFASMFAYITATPFV YIDYFHVSPQHYGLLFGLNVVGIMIGNFLNTRLVGRVGSLKIIAGASLLSGAASFCVAFFALTGLGGLWSIVASLFFVVS VVGILSANCTTDLMLRYPHNAGAAAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGATGLLCLGGRVLVLRWHGRPV KGRLGSADVA
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=397, Percent_Identity=33.7531486146096, Blast_Score=235, Evalue=5e-63, Organism=Escherichia coli, GI48994889, Length=373, Percent_Identity=29.7587131367292, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1790146, Length=202, Percent_Identity=32.6732673267327, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787065, Length=279, Percent_Identity=30.8243727598566, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87082312, Length=344, Percent_Identity=27.3255813953488, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1790794, Length=221, Percent_Identity=23.0769230769231, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790195, Length=138, Percent_Identity=28.9855072463768, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789207, Length=142, Percent_Identity=34.5070422535211, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1787880, Length=230, Percent_Identity=28.2608695652174, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319657, Length=168, Percent_Identity=27.3809523809524, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324264, Length=178, Percent_Identity=25.8426966292135, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319480, Length=362, Percent_Identity=21.8232044198895, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322071, Length=165, Percent_Identity=27.8787878787879, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42499; Mature: 42368
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVARRRPDGRLILLLGALAACGPIATDMYLPSLPAIADGFGVTAAAAQRTLTSFMAGF CCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHH SIGMLLYGPLSDTYGRRPVLLGGIALFTLASIGCFVATSIDMLIVVRFLQAFGAGAASVL HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ARAIARDAHEPSDAAKVLSMVAIVTAIGPLLAPLIGGQVLRFSGWRGVFVVLTLFGAVCA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH TAAFLRVPETWPREKRASSAVLNSFAAYGRILADPVAWGHMLCGGMAFASMFAYITATPF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VYIDYFHVSPQHYGLLFGLNVVGIMIGNFLNTRLVGRVGSLKIIAGASLLSGAASFCVAF EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH FALTGLGGLWSIVASLFFVVSVVGILSANCTTDLMLRYPHNAGAAAAVFGAMQLALGALA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH SVAIGALADGTPFAMGVTIGATGLLCLGGRVLVLRWHGRPVKGRLGSADVA HHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PHVARRRPDGRLILLLGALAACGPIATDMYLPSLPAIADGFGVTAAAAQRTLTSFMAGF CCCCCCCCCCCEEHHHHHHHHCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHH SIGMLLYGPLSDTYGRRPVLLGGIALFTLASIGCFVATSIDMLIVVRFLQAFGAGAASVL HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ARAIARDAHEPSDAAKVLSMVAIVTAIGPLLAPLIGGQVLRFSGWRGVFVVLTLFGAVCA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH TAAFLRVPETWPREKRASSAVLNSFAAYGRILADPVAWGHMLCGGMAFASMFAYITATPF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VYIDYFHVSPQHYGLLFGLNVVGIMIGNFLNTRLVGRVGSLKIIAGASLLSGAASFCVAF EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH FALTGLGGLWSIVASLFFVVSVVGILSANCTTDLMLRYPHNAGAAAAVFGAMQLALGALA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH SVAIGALADGTPFAMGVTIGATGLLCLGGRVLVLRWHGRPVKGRLGSADVA HHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]