Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is pcaK [H]
Identifier: 83719999
GI number: 83719999
Start: 1569461
End: 1571200
Strand: Direct
Name: pcaK [H]
Synonym: BTH_I1396
Alternate gene names: 83719999
Gene position: 1569461-1571200 (Clockwise)
Preceding gene: 83720631
Following gene: 83719016
Centisome position: 41.2
GC content: 71.55
Gene sequence:
>1740_bases ATGACGCGCGCCCCGGCACGTTCTATCTGCTGCGTCCGGACCAGCATGTGTGCGCGCGCTTTCGCACGGCGCAAGCGAGC GCGGTGCGCGCGGCGCTCGCCCGCGCGATCTGCCGCGCGTGAGCGGAAAACCAACGAACGAGACCAGGAGACACCCGATG CACCTCGACACCCGCTTGCGCCTGCCCGATCCGGACGCGTTCTACGAAGCGCTGATCGACATGCACCGCGATCTGCCCGA CAGCGAGAGCCAGCTCGTCAACGCGAAGCTGATCCTGCTGCTCGCGAACCAGATCGGCGACCTCGACGTGCTGCGCGAAG CGATGGCGCTCGCGCGCAGCGGCGCGGCCGTGCTCGAAGGCGCGCCCGGCGCGCCCGCGCTGCAATGAGCGCGGCGGCGA GTGCCGCGCGCGTGCTCGAAGTTGAGCGCGTGATCGACGACACGCACCGGCCCGCGTTTCACGCGATGCTGCTCGCGCTG TGCGGGCTGTGCCTCGTGATCGACGGTTTCGATGCGCAGGCGATGGGCTACGTCGCGCCGAGCGTGATCGCCGAGTGGGG CGTGAAGAAGCAGGCGCTCGGGCCCGTCTTCAGCGCGAGCCTGTTCGGGATGCTGCTCGGCGCGCTCGGCCTGTCGGTGC TCGCCGACCGGATCGGCCGGCGGCCGGTATTGATCGGCGCGACGCTGTTCTTCGCGCTGACGATGCTCGCGACGCCGTTC GCGACATCGATTCCGACGCTGATCGCGCTGCGCTTCGTCACGGGCCTGGGGCTCGGCTGCATCATGCCGAACGCGATGGC GCTCGTCGGTGAATGCAGCCCGGGCGCGCACCGCGTGAAGCGGATGATGATCGTGTCGTGCGGCTTCACGGCCGGCGCGG CGCTGGGCGGCTTCGTCAGCGCGGCGCTGATTCCGGCGTTCGGCTGGCGCGCGGTGTTCTTCGTCGGCGGCGCGGTGCCG CTCGCGCTCGCGGCCGCGATGGCCGCGCGCCTGCCCGAATCGCCGCAACTGCTCGTGCTGCGCGGCCGGCACGACGCGGC GCGCGCGTGGCTCGCGAAGTTCGCGCCGCAGCTCGCGGTCTCGCCCGATACGCGGCTCGTCGTGCGCGAAGCGGGGCCGC AGGGCGCGCCCGTCGCCGAGCTGTTCCGCTCGGGGCGCGCGAGCGTCACGCTGCTGCTCTGGGCGATCAACTTCATGAAC CTGATCGACCTGTACTTCCTGTCGAACTGGCTGCCGACCGTGATGCGCGACGCGGGCTACGCGAGCGGCACGGCCGTCAT CGTCGGCACCGTGCTGCAGACGGGCGGCGTGATCGGCACGCTGTCGCTCGGCCGGTTCATCGAACGGTACGGCTTCGTGC GCGTGCTGTTCGCCTGCTTCGCGTGCGCGGCGATCGCGGTCGGCCTGATCGGCTCGGTCGCGCATGCGTTTTACTGGCTG CTCGCAGCCGTGTTCGTCGGCGGCTTTTGCGTCGTTGGCGGACAGCCCGCGGTCAACGCGCTCGCGGGCCATTATTACCC GACGTCGCTGCGCTCGACGGGCATCGGCTGGAGCCTCGGCGTGGGCCGCGTCGGCTCCGTGCTCGGGCCGCTCGTCGGCG GGCAGCTGATCGCGCTCGGCTGGTCGAACGACGCGCTCTTTCACGCGGCGGCCGTGCCGGTGCTGTGCTCGGCCGTCTTC GTGATCGGCCTCGCGAGCGTGACGCGGCGGCGCGGCACGGCCGCGCCGAACGTCGCTTGA
Upstream 100 bases:
>100_bases CCGCCGGTCGCGCCCGTGCTCGTCGTGCCGAAGGGCGAGGCGCGCGCGGTCGAGGGCGTCGACGTGATCGAGGACAGCGA AGGGCTCGCCGCGCAGCGCT
Downstream 100 bases:
>100_bases ATGGAGAGAACGACAATCATGACACTGGATTTTTCGAAACCGGGCGAAGCCGGCTATCAGAGCGGCTTCGCGAACGAATT CGCGACCGAGGCGCTGCCGG
Product: 4-hydroxybenzoate transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MTRAPARSICCVRTSMCARAFARRKRARCARRSPARSAARERKTNERDQETPDAPRHPLAPARSGRVLRSADRHAPRSAR QREPARQREADPAAREPDRRPRRAARSDGARAQRRGRARRRARRARAAMSAAASAARVLEVERVIDDTHRPAFHAMLLAL CGLCLVIDGFDAQAMGYVAPSVIAEWGVKKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGATLFFALTMLATPF ATSIPTLIALRFVTGLGLGCIMPNAMALVGECSPGAHRVKRMMIVSCGFTAGAALGGFVSAALIPAFGWRAVFFVGGAVP LALAAAMAARLPESPQLLVLRGRHDAARAWLAKFAPQLAVSPDTRLVVREAGPQGAPVAELFRSGRASVTLLLWAINFMN LIDLYFLSNWLPTVMRDAGYASGTAVIVGTVLQTGGVIGTLSLGRFIERYGFVRVLFACFACAAIAVGLIGSVAHAFYWL LAAVFVGGFCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVLGPLVGGQLIALGWSNDALFHAAAVPVLCSAVF VIGLASVTRRRGTAAPNVA
Sequences:
>Translated_579_residues MTRAPARSICCVRTSMCARAFARRKRARCARRSPARSAARERKTNERDQETPDAPRHPLAPARSGRVLRSADRHAPRSAR QREPARQREADPAAREPDRRPRRAARSDGARAQRRGRARRRARRARAAMSAAASAARVLEVERVIDDTHRPAFHAMLLAL CGLCLVIDGFDAQAMGYVAPSVIAEWGVKKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGATLFFALTMLATPF ATSIPTLIALRFVTGLGLGCIMPNAMALVGECSPGAHRVKRMMIVSCGFTAGAALGGFVSAALIPAFGWRAVFFVGGAVP LALAAAMAARLPESPQLLVLRGRHDAARAWLAKFAPQLAVSPDTRLVVREAGPQGAPVAELFRSGRASVTLLLWAINFMN LIDLYFLSNWLPTVMRDAGYASGTAVIVGTVLQTGGVIGTLSLGRFIERYGFVRVLFACFACAAIAVGLIGSVAHAFYWL LAAVFVGGFCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVLGPLVGGQLIALGWSNDALFHAAAVPVLCSAVF VIGLASVTRRRGTAAPNVA >Mature_578_residues TRAPARSICCVRTSMCARAFARRKRARCARRSPARSAARERKTNERDQETPDAPRHPLAPARSGRVLRSADRHAPRSARQ REPARQREADPAAREPDRRPRRAARSDGARAQRRGRARRRARRARAAMSAAASAARVLEVERVIDDTHRPAFHAMLLALC GLCLVIDGFDAQAMGYVAPSVIAEWGVKKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGATLFFALTMLATPFA TSIPTLIALRFVTGLGLGCIMPNAMALVGECSPGAHRVKRMMIVSCGFTAGAALGGFVSAALIPAFGWRAVFFVGGAVPL ALAAAMAARLPESPQLLVLRGRHDAARAWLAKFAPQLAVSPDTRLVVREAGPQGAPVAELFRSGRASVTLLLWAINFMNL IDLYFLSNWLPTVMRDAGYASGTAVIVGTVLQTGGVIGTLSLGRFIERYGFVRVLFACFACAAIAVGLIGSVAHAFYWLL AAVFVGGFCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVLGPLVGGQLIALGWSNDALFHAAAVPVLCSAVFV IGLASVTRRRGTAAPNVA
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=421, Percent_Identity=24.7030878859857, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI166064021, Length=382, Percent_Identity=28.2722513089005, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI8923870, Length=373, Percent_Identity=27.6139410187668, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI7662270, Length=299, Percent_Identity=21.4046822742475, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI213021148, Length=441, Percent_Identity=23.1292517006803, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87081723, Length=410, Percent_Identity=34.390243902439, Blast_Score=175, Evalue=6e-45, Organism=Escherichia coli, GI87082231, Length=407, Percent_Identity=25.0614250614251, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1788068, Length=398, Percent_Identity=24.6231155778894, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87082404, Length=393, Percent_Identity=22.9007633587786, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786229, Length=393, Percent_Identity=21.1195928753181, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788074, Length=257, Percent_Identity=27.6264591439689, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI87082159, Length=389, Percent_Identity=24.6786632390745, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI32564663, Length=472, Percent_Identity=22.6694915254237, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24640198, Length=575, Percent_Identity=22.4347826086957, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24640196, Length=575, Percent_Identity=22.4347826086957, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24640200, Length=575, Percent_Identity=22.4347826086957, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI19922874, Length=406, Percent_Identity=23.1527093596059, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI161077756, Length=473, Percent_Identity=23.6786469344609, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922616, Length=420, Percent_Identity=23.3333333333333, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 61355; Mature: 61223
Theoretical pI: Translated: 12.01; Mature: 12.01
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAPARSICCVRTSMCARAFARRKRARCARRSPARSAARERKTNERDQETPDAPRHPLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC PARSGRVLRSADRHAPRSARQREPARQREADPAAREPDRRPRRAARSDGARAQRRGRARR CCCCCCHHHHHHHCCCHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHH RARRARAAMSAAASAARVLEVERVIDDTHRPAFHAMLLALCGLCLVIDGFDAQAMGYVAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SVIAEWGVKKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGATLFFALTMLATPF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCH ATSIPTLIALRFVTGLGLGCIMPNAMALVGECSPGAHRVKRMMIVSCGFTAGAALGGFVS HHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH AALIPAFGWRAVFFVGGAVPLALAAAMAARLPESPQLLVLRGRHDAARAWLAKFAPQLAV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCC SPDTRLVVREAGPQGAPVAELFRSGRASVTLLLWAINFMNLIDLYFLSNWLPTVMRDAGY CCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASGTAVIVGTVLQTGGVIGTLSLGRFIERYGFVRVLFACFACAAIAVGLIGSVAHAFYWL CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAVFVGGFCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVLGPLVGGQLIALG HHHHHHCCEEEECCCHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEE WSNDALFHAAAVPVLCSAVFVIGLASVTRRRGTAAPNVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TRAPARSICCVRTSMCARAFARRKRARCARRSPARSAARERKTNERDQETPDAPRHPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC PARSGRVLRSADRHAPRSARQREPARQREADPAAREPDRRPRRAARSDGARAQRRGRARR CCCCCCHHHHHHHCCCHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHH RARRARAAMSAAASAARVLEVERVIDDTHRPAFHAMLLALCGLCLVIDGFDAQAMGYVAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SVIAEWGVKKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGATLFFALTMLATPF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCH ATSIPTLIALRFVTGLGLGCIMPNAMALVGECSPGAHRVKRMMIVSCGFTAGAALGGFVS HHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH AALIPAFGWRAVFFVGGAVPLALAAAMAARLPESPQLLVLRGRHDAARAWLAKFAPQLAV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCC SPDTRLVVREAGPQGAPVAELFRSGRASVTLLLWAINFMNLIDLYFLSNWLPTVMRDAGY CCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASGTAVIVGTVLQTGGVIGTLSLGRFIERYGFVRVLFACFACAAIAVGLIGSVAHAFYWL CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAVFVGGFCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVLGPLVGGQLIALG HHHHHHCCEEEECCCHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEE WSNDALFHAAAVPVLCSAVFVIGLASVTRRRGTAAPNVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]