Click here to switch to the map view.

The map label for this gene is pdxY [H]

Identifier: 83719965

GI number: 83719965

Start: 1976052

End: 1977116

Strand: Reverse

Name: pdxY [H]

Synonym: BTH_I1763

Alternate gene names: 83719965

Gene position: 1977116-1976052 (Counterclockwise)

Preceding gene: 83720154

Following gene: 83720567

Centisome position: 51.9

GC content: 67.23

Gene sequence:

>1065_bases
ATGCGAATCTGGACCATCGTCGAAGCCTGGAAGAGTGAAGGAAGCGGCTCGCCCGACGTCCGTGCAAGCCGCGCGCCATT
TTACTTTCGGCGTGCTGACGCCTCCCCGACACCGTATTACCGGATGTTTCCGCGAATGCGGGAAAGTCATGTATCGTTCG
ACCTAGTCCGACGAGCCCGCCGCGCGCAGGCACACTCGATCATGAAAAACGTCCTCAGCATCCAGTCGCATGTCATCTAC
GGACATGCGGGCAACAGCGCCGCAGTGTTTCCAATGCAACGGCTCGGCGTCAACGTCTGGCCGCTCAACACGGTGCAGTT
GTCGAACCACATGCAGTACGGCCACTGGGCGGGCAGCGCGATCGACGCGGCCAAGATGGAGCAACTCGTCGACGGCATCG
CCGCGATCGGCGCGCTCAAGCGCTGCGACGCGGTCCTCTCGGGCTTCCTCGGCTCGCCCGCGCAGGCGCGCGCGGCGGTC
GAGATCGTGCGCACCGTGAAGGCGACGAATCCGAACGCGTGGTACTTCTGCGATCCCGCAATGGGCCAGACGGGCGGCAT
CCGGCCCGAGCCCGGCGTCGAGGAATTCATCGTCGCCGAGCTGCCGGAGCTCGCGGACGGCATGGCGCCCAATCACGGCG
AGCTGCAAAAGCTCGCCGGACAGCGCATCGAGACGGTGGCCGAGGCCGTCGAAGCGTGCCGCTCGATCATCCGCCGCGGC
CCGCGGCTGATTCTCGTCAAGCATCTGCACGATCGCAACAGCCCCGCCGACCGTTTCAACATGCTCGTCGTCACCGAAAC
CGAAGCGTGGATCGGCCAGCGTCCGCTGTATGCGTTCCCGCGGCACCCGGTCGGCGTCGGCGACCTGACGAGCGCGATCT
TCGTCGCACGCCGGCTGCGCGGCGACAGCGTGCGCGCCGCGTTCGAGCACACGCTCGCCGCCGTGCACGCGGTCGTCAAG
GCGACCTACGACGCGCGGCGCTACGAGCTCGAGCTCGTCGCCGCGCAGGACGAGATCGCGCAGCCGAGCGAGTGGTTCGG
CGCGTGGGTCACGGGCGCGGATTGA

Upstream 100 bases:

>100_bases
AGCGAAGACCTGCGGCACGAAGGCCTGCGAAGCGGCAAACGCCGGCGTCTGCGCGATCGACGCTGCAGCGGATACTGCGG
CGAGCCGCGCGAACCACACC

Downstream 100 bases:

>100_bases
TGCGCGGCGCGCGACGGTCCGCGTGTTGAGCCGCACGCCCCGTCGCGCGCTTGTGTTTCGGCCGCCGCGGGGCGGAGCGC
CACCGCGGCTCTCGCGGCTT

Product: pyridoxal kinase

Products: NA

Alternate protein names: PM kinase [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRIWTIVEAWKSEGSGSPDVRASRAPFYFRRADASPTPYYRMFPRMRESHVSFDLVRRARRAQAHSIMKNVLSIQSHVIY
GHAGNSAAVFPMQRLGVNVWPLNTVQLSNHMQYGHWAGSAIDAAKMEQLVDGIAAIGALKRCDAVLSGFLGSPAQARAAV
EIVRTVKATNPNAWYFCDPAMGQTGGIRPEPGVEEFIVAELPELADGMAPNHGELQKLAGQRIETVAEAVEACRSIIRRG
PRLILVKHLHDRNSPADRFNMLVVTETEAWIGQRPLYAFPRHPVGVGDLTSAIFVARRLRGDSVRAAFEHTLAAVHAVVK
ATYDARRYELELVAAQDEIAQPSEWFGAWVTGAD

Sequences:

>Translated_354_residues
MRIWTIVEAWKSEGSGSPDVRASRAPFYFRRADASPTPYYRMFPRMRESHVSFDLVRRARRAQAHSIMKNVLSIQSHVIY
GHAGNSAAVFPMQRLGVNVWPLNTVQLSNHMQYGHWAGSAIDAAKMEQLVDGIAAIGALKRCDAVLSGFLGSPAQARAAV
EIVRTVKATNPNAWYFCDPAMGQTGGIRPEPGVEEFIVAELPELADGMAPNHGELQKLAGQRIETVAEAVEACRSIIRRG
PRLILVKHLHDRNSPADRFNMLVVTETEAWIGQRPLYAFPRHPVGVGDLTSAIFVARRLRGDSVRAAFEHTLAAVHAVVK
ATYDARRYELELVAAQDEIAQPSEWFGAWVTGAD
>Mature_354_residues
MRIWTIVEAWKSEGSGSPDVRASRAPFYFRRADASPTPYYRMFPRMRESHVSFDLVRRARRAQAHSIMKNVLSIQSHVIY
GHAGNSAAVFPMQRLGVNVWPLNTVQLSNHMQYGHWAGSAIDAAKMEQLVDGIAAIGALKRCDAVLSGFLGSPAQARAAV
EIVRTVKATNPNAWYFCDPAMGQTGGIRPEPGVEEFIVAELPELADGMAPNHGELQKLAGQRIETVAEAVEACRSIIRRG
PRLILVKHLHDRNSPADRFNMLVVTETEAWIGQRPLYAFPRHPVGVGDLTSAIFVARRLRGDSVRAAFEHTLAAVHAVVK
ATYDARRYELELVAAQDEIAQPSEWFGAWVTGAD

Specific function: Phosphorylates B6 vitamers; functions in a salvage pathway. Uses pyridoxamine [H]

COG id: COG2240

COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyridoxine kinase family [H]

Homologues:

Organism=Homo sapiens, GI4505701, Length=301, Percent_Identity=29.2358803986711, Blast_Score=121, Evalue=8e-28,
Organism=Escherichia coli, GI1787924, Length=284, Percent_Identity=52.112676056338, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1788758, Length=271, Percent_Identity=25.0922509225092, Blast_Score=90, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17507759, Length=263, Percent_Identity=30.0380228136882, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17507757, Length=273, Percent_Identity=28.9377289377289, Blast_Score=109, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324354, Length=275, Percent_Identity=32, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6320806, Length=275, Percent_Identity=29.8181818181818, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI45553007, Length=298, Percent_Identity=29.5302013422819, Blast_Score=131, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013749
- InterPro:   IPR004625 [H]

Pfam domain/function: PF08543 Phos_pyr_kin [H]

EC number: =2.7.1.35 [H]

Molecular weight: Translated: 39116; Mature: 39116

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIWTIVEAWKSEGSGSPDVRASRAPFYFRRADASPTPYYRMFPRMRESHVSFDLVRRAR
CEEEHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHH
RAQAHSIMKNVLSIQSHVIYGHAGNSAAVFPMQRLGVNVWPLNTVQLSNHMQYGHWAGSA
HHHHHHHHHHHHHHHHHEEEEECCCCCEECCHHHHCCEECCCCEEECCCCCCCCCCCCCH
IDAAKMEQLVDGIAAIGALKRCDAVLSGFLGSPAQARAAVEIVRTVKATNPNAWYFCDPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
MGQTGGIRPEPGVEEFIVAELPELADGMAPNHGELQKLAGQRIETVAEAVEACRSIIRRG
CCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRLILVKHLHDRNSPADRFNMLVVTETEAWIGQRPLYAFPRHPVGVGDLTSAIFVARRLR
CCEEEEEECCCCCCCHHHEEEEEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GDSVRAAFEHTLAAVHAVVKATYDARRYELELVAAQDEIAQPSEWFGAWVTGAD
CCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCHHHCCCHHHHCCEECCCC
>Mature Secondary Structure
MRIWTIVEAWKSEGSGSPDVRASRAPFYFRRADASPTPYYRMFPRMRESHVSFDLVRRAR
CEEEHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHH
RAQAHSIMKNVLSIQSHVIYGHAGNSAAVFPMQRLGVNVWPLNTVQLSNHMQYGHWAGSA
HHHHHHHHHHHHHHHHHEEEEECCCCCEECCHHHHCCEECCCCEEECCCCCCCCCCCCCH
IDAAKMEQLVDGIAAIGALKRCDAVLSGFLGSPAQARAAVEIVRTVKATNPNAWYFCDPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
MGQTGGIRPEPGVEEFIVAELPELADGMAPNHGELQKLAGQRIETVAEAVEACRSIIRRG
CCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRLILVKHLHDRNSPADRFNMLVVTETEAWIGQRPLYAFPRHPVGVGDLTSAIFVARRLR
CCEEEEEECCCCCCCHHHEEEEEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GDSVRAAFEHTLAAVHAVVKATYDARRYELELVAAQDEIAQPSEWFGAWVTGAD
CCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCHHHCCCHHHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA