| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is plcN [H]
Identifier: 83720567
GI number: 83720567
Start: 1973432
End: 1976029
Strand: Reverse
Name: plcN [H]
Synonym: BTH_I1762
Alternate gene names: 83720567
Gene position: 1976029-1973432 (Counterclockwise)
Preceding gene: 83719965
Following gene: 83718750
Centisome position: 51.88
GC content: 69.05
Gene sequence:
>2598_bases GTGTTGAGCCGCACGCCCCGTCGCGCGCTTGTGTTTCGGCCGCCGCGGGGCGGAGCGCCACCGCGGCTCTCGCGGCTTCC GTTTGCCTCGCCGCGCCCGCCGCTCGCTTCGCCGTTCTCGCCGTTCTCGCCGTTCTCGCCGTTCTCGCCGTTCTCGCCGT TCTCGCTTTCGTCGCTTTCGTCGCACGCCTCACGGCTATCGCGACGGCCGCGCCCTTCGCCCGCCCGCTCGCGTCTTTGC GACGAGCCGTACCCGCCGCGCCGTCACGCGCGCCGCAGCGGCGCTGCACGCGCCATCGCGCCCGAACGCGCGCGCCGGCA TCCGCGCGCATGCCCGCGCGCGTTCATCCGGATGACACCGTTTCCCCGATATCCTCCCGGCGGCGTTGCGCGGCGGCGCT GCCGCGCACGACGGCATCACGCATCGCGACCAACTTCCCTCCGGCCGCCGCCGCTCCGGCGGTCTCGCCCCACCCCAAAA CAAGGAAGCGACAACATGACGAATCAGAATCGCCGAGACTTTCTGCGCCTCGCCGCCGGCACGGCGGGCGCGGCCGCGTT GCAACTCTTTCCGCCTGTGATCCGCGAAGCGCTCGCGATTCCCGCGAACCGCCGCACCGGCACGATCCGCGACGTCGAGC ACATCGTGATCCTGATGCAGGAAAACCGCTCGTTCGACCATTACTTCGGCAAGCTGCGCGGCGTGCGCGGCTTCGGCGAT CCGCGCCCGCTCACGCTGCAGAACGGCAAGCCGGTGTTCCATCAGCCGGTGCTCCTCGGCCCGGCCGAGCTGCTGCCGTT CCATCCGGACGCATCGAATCTCGGCATGCAGTTCCTGCAAGACCTGCCGCACGGCTGGCAGGACACGCACGGCGCATGGA ACAAGGGGCGCTACGACCGCTGGATCGCGAACAAGGGCACGACGACGATGGCGTACCTCGAACGCGGCGACATCCCGTTC CACTACCAGCTCGCCGATGCGTTCACGATCTGCGACGCGTACCACTGCTCGATCCCGAGCTCGACCGACCCGAACCGGTA CTACATGTGGACGGGCTACGTCGGCAACGACGGCGCGGGCGGCGGCCCGGTGCTCGGCAACGAGGAAGCCGGCTACGGCT GGAGCACGTATCCGGAGACGCTCGAGCAGGCCGGCGTGTCGTGGAAGATCTATCAGGACATCGGCACGGGCCTCGACGCG GCGGGCTCGTGGGGCTGGACGCAGAACCCGTACATCGGCAACTACGGCGACAATGCGCTCCTCTACTTCAACCAGTACCG CAACGCGCAGCCGGGCAGCCCGCTGTACGACAAGGCGCGCACGGGCACGAACGTGAGCGCGGGCGGCACCCTGTTCGACG TGTTGCAGCAGGACGTGAAGAACGGCACGCTGCCGCAGGTGTCATGGATCTGCGCGCCGGAAGCGTATTCGGAGCACCCG AACTGGCCGGCGAACTACGGCGCGTGGTACGTCGAGCAGGTGCTGAAGGCGCTGACGTCGAATCCGGACGTGTGGAGCAA AACCGCGCTCTTCATCACGTACGACGAGAACGACGGCTTCTTCGATCACGTCGCGCCGCCGTTCGCGCCGCAATCGCGCG ACAACGGGCTGTCGACGGTGTCGACCGCGGGCGAGATCTTCCCGGGCGACGCGGCGCACATGGCTGGGCCGTACGGGCTC GGGCCGCGCGTGCCGATGCTCGTCGTATCGCCGTGGACGAAGGGCGGCTGGGTCTGCTCGCAGACGTTCGATCACACGTC GCTGCTGCAATTCATCGAGGCGCGCTTCAACGATCGCTACCCGGTGCGCGCGCCGAACGTGACGCCGTGGCGCCGCGCGG TGTGCGGCGATCTCACGTCCGCGTTCAACTTCTCGAGCCCGGACGGCAGCTGGCCGCAACTGCCCGACACGAGCGGCTAC GCGCCGCCCGATCGCAATCGCCACCCGAGCTACGTGCCGGTGCCGCCCGTCGCGCAGTCGATGCCGAAACAGGAAGCGGG CCTGCGCGCCGCGCGCGCGTTGCCGTATGAGCTCTTCGTGCTCGGCCGCATCGATCAGTCGACCGGCAAGTTCAAGCTGA CCTTCGCGAACACGGGCCGGGCGGGCGCGGCGTTCCAGGTGACGGCCGGCAATCGCGTCGACGGTCCGTGGGCGTACACG GTCGAAGCGCGCAAGCGTCTGTCCGACGAGTGGAGCACGGCGCTCACGCTGAGCCTCTACGATCTGACCGTGTACGGTCC GAACGGCTTCCTCTGCCAGTTCCGCGGCTCGACCGCGGCCGCGCTCGGCCTCAACGCGAACCCGGAAGTGATCTACGGCT ACGACGTCGCGAACGGCAACATCACGCTGCGCCTGTCGAACCGCGGGCGTGCGACGGTGCGGCTCACAGTCGCGAACGCG TACGGCAAGGAAAGCCCGCGCGTCTACGAGCTGAAGCCCGGCCAGCGGATCAACGACTACTGGGATCTGCGCGACAGCCA CAGCTGGTACGACCTGACCGTCTCCGACGGCGCGCCGAACGGCTTCCTGCGCCGCTTCGCGGGACACGTCGAGACGGGCC GGCCGAGCACGAGCGATCCGCTGATCGCGACGGTCTGA
Upstream 100 bases:
>100_bases CTCGAGCTCGTCGCCGCGCAGGACGAGATCGCGCAGCCGAGCGAGTGGTTCGGCGCGTGGGTCACGGGCGCGGATTGATG CGCGGCGCGCGACGGTCCGC
Downstream 100 bases:
>100_bases GCGGCGCGCCGTGCGCTCGCGTGCGGCGCTTCGGCGGCGCACGCGGCTGACGGACTGGGCGCGGACGATCGAAGGCCGCG CGGCGGGCGAGCGCACGACA
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 865; Mature: 865
Protein sequence:
>865_residues MLSRTPRRALVFRPPRGGAPPRLSRLPFASPRPPLASPFSPFSPFSPFSPFSPFSLSSLSSHASRLSRRPRPSPARSRLC DEPYPPRRHARRSGAARAIAPERARRHPRACPRAFIRMTPFPRYPPGGVARRRCRARRHHASRPTSLRPPPLRRSRPTPK QGSDNMTNQNRRDFLRLAAGTAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSFDHYFGKLRGVRGFGD PRPLTLQNGKPVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHGWQDTHGAWNKGRYDRWIANKGTTTMAYLERGDIPF HYQLADAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAGGGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDA AGSWGWTQNPYIGNYGDNALLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHP NWPANYGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRDNGLSTVSTAGEIFPGDAAHMAGPYGL GPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFNDRYPVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGY APPDRNRHPSYVPVPPVAQSMPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAFQVTAGNRVDGPWAYT VEARKRLSDEWSTALTLSLYDLTVYGPNGFLCQFRGSTAAALGLNANPEVIYGYDVANGNITLRLSNRGRATVRLTVANA YGKESPRVYELKPGQRINDYWDLRDSHSWYDLTVSDGAPNGFLRRFAGHVETGRPSTSDPLIATV
Sequences:
>Translated_865_residues MLSRTPRRALVFRPPRGGAPPRLSRLPFASPRPPLASPFSPFSPFSPFSPFSPFSLSSLSSHASRLSRRPRPSPARSRLC DEPYPPRRHARRSGAARAIAPERARRHPRACPRAFIRMTPFPRYPPGGVARRRCRARRHHASRPTSLRPPPLRRSRPTPK QGSDNMTNQNRRDFLRLAAGTAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSFDHYFGKLRGVRGFGD PRPLTLQNGKPVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHGWQDTHGAWNKGRYDRWIANKGTTTMAYLERGDIPF HYQLADAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAGGGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDA AGSWGWTQNPYIGNYGDNALLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHP NWPANYGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRDNGLSTVSTAGEIFPGDAAHMAGPYGL GPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFNDRYPVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGY APPDRNRHPSYVPVPPVAQSMPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAFQVTAGNRVDGPWAYT VEARKRLSDEWSTALTLSLYDLTVYGPNGFLCQFRGSTAAALGLNANPEVIYGYDVANGNITLRLSNRGRATVRLTVANA YGKESPRVYELKPGQRINDYWDLRDSHSWYDLTVSDGAPNGFLRRFAGHVETGRPSTSDPLIATV >Mature_865_residues MLSRTPRRALVFRPPRGGAPPRLSRLPFASPRPPLASPFSPFSPFSPFSPFSPFSLSSLSSHASRLSRRPRPSPARSRLC DEPYPPRRHARRSGAARAIAPERARRHPRACPRAFIRMTPFPRYPPGGVARRRCRARRHHASRPTSLRPPPLRRSRPTPK QGSDNMTNQNRRDFLRLAAGTAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSFDHYFGKLRGVRGFGD PRPLTLQNGKPVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHGWQDTHGAWNKGRYDRWIANKGTTTMAYLERGDIPF HYQLADAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAGGGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDA AGSWGWTQNPYIGNYGDNALLYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHP NWPANYGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRDNGLSTVSTAGEIFPGDAAHMAGPYGL GPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFNDRYPVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGY APPDRNRHPSYVPVPPVAQSMPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAFQVTAGNRVDGPWAYT VEARKRLSDEWSTALTLSLYDLTVYGPNGFLCQFRGSTAAALGLNANPEVIYGYDVANGNITLRLSNRGRATVRLTVANA YGKESPRVYELKPGQRINDYWDLRDSHSWYDLTVSDGAPNGFLRRFAGHVETGRPSTSDPLIATV
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 95800; Mature: 95800
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRTPRRALVFRPPRGGAPPRLSRLPFASPRPPLASPFSPFSPFSPFSPFSPFSLSSLS CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH SHASRLSRRPRPSPARSRLCDEPYPPRRHARRSGAARAIAPERARRHPRACPRAFIRMTP HHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHCCCC FPRYPPGGVARRRCRARRHHASRPTSLRPPPLRRSRPTPKQGSDNMTNQNRRDFLRLAAG CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC TAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSFDHYFGKLRGVRGFGD CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCC PRPLTLQNGKPVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHGWQDTHGAWNKGRYDR CCCEEECCCCCCCCCCEEECHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WIANKGTTTMAYLERGDIPFHYQLADAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAG EECCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCC GGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDAAGSWGWTQNPYIGNYGDNAL CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE LYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHP EEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHCCC NWPANYGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRDNGLSTV CCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCH STAGEIFPGDAAHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFNDRY HCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCC PVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGYAPPDRNRHPSYVPVPPVAQS CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH MPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAFQVTAGNRVDGPWAYT CCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEE VEARKRLSDEWSTALTLSLYDLTVYGPNGFLCQFRGSTAAALGLNANPEVIYGYDVANGN HHHHHHHHHHHCEEEEEEEEEEEEECCCCEEEEECCCCEEEEECCCCCCEEEEEEECCCE ITLRLSNRGRATVRLTVANAYGKESPRVYELKPGQRINDYWDLRDSHSWYDLTVSDGAPN EEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCCH GFLRRFAGHVETGRPSTSDPLIATV HHHHHHHCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MLSRTPRRALVFRPPRGGAPPRLSRLPFASPRPPLASPFSPFSPFSPFSPFSPFSLSSLS CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH SHASRLSRRPRPSPARSRLCDEPYPPRRHARRSGAARAIAPERARRHPRACPRAFIRMTP HHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHCCCC FPRYPPGGVARRRCRARRHHASRPTSLRPPPLRRSRPTPKQGSDNMTNQNRRDFLRLAAG CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC TAGAAALQLFPPVIREALAIPANRRTGTIRDVEHIVILMQENRSFDHYFGKLRGVRGFGD CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCC PRPLTLQNGKPVFHQPVLLGPAELLPFHPDASNLGMQFLQDLPHGWQDTHGAWNKGRYDR CCCEEECCCCCCCCCCEEECHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WIANKGTTTMAYLERGDIPFHYQLADAFTICDAYHCSIPSSTDPNRYYMWTGYVGNDGAG EECCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCC GGPVLGNEEAGYGWSTYPETLEQAGVSWKIYQDIGTGLDAAGSWGWTQNPYIGNYGDNAL CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE LYFNQYRNAQPGSPLYDKARTGTNVSAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHP EEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHCCC NWPANYGAWYVEQVLKALTSNPDVWSKTALFITYDENDGFFDHVAPPFAPQSRDNGLSTV CCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCH STAGEIFPGDAAHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFNDRY HCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCC PVRAPNVTPWRRAVCGDLTSAFNFSSPDGSWPQLPDTSGYAPPDRNRHPSYVPVPPVAQS CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH MPKQEAGLRAARALPYELFVLGRIDQSTGKFKLTFANTGRAGAAFQVTAGNRVDGPWAYT CCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEE VEARKRLSDEWSTALTLSLYDLTVYGPNGFLCQFRGSTAAALGLNANPEVIYGYDVANGN HHHHHHHHHHHCEEEEEEEEEEEEECCCCEEEEECCCCEEEEECCCCCCEEEEEEECCCE ITLRLSNRGRATVRLTVANAYGKESPRVYELKPGQRINDYWDLRDSHSWYDLTVSDGAPN EEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCCH GFLRRFAGHVETGRPSTSDPLIATV HHHHHHHCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]