Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83719648
Identifier: 83719648
GI number: 83719648
Start: 1534979
End: 1536058
Strand: Direct
Name: 83719648
Synonym: BTH_I1356
Alternate gene names: NA
Gene position: 1534979-1536058 (Clockwise)
Preceding gene: 83720582
Following gene: 83721198
Centisome position: 40.3
GC content: 65.0
Gene sequence:
>1080_bases ATGGCGCTGGGCGCGGGTTTGCGGTCGGTCTATCTGCGGCGCGGCGCGAGCGTGTCCGGCGCGCGCGATGCGCCGGCCGC GATTCGCTCCGATGCGTCGATCGAGGTGCTGAACGGACAGATGGCGTCCGGGCTCGCGCGCGCCGACGCAGCCGCGGTCT TCGCCGTGATGTCCGGCGTGTTCCGCCGTTATTGCGTCTCGCAGTGCCTGATGTGGAACGGCCAGCAGCTCGTTTGCCGT GCGGTCGCGCATGCGTGCGCGGCGCATGGGGTTCCGACGAAATTCGTCGAGATCTCGAACCTGCCGGACAAGCTGTTCGT CGACCGGCTCGGCGTCAACGCGCTGTCGTCGATCAGTCGCAATCCGGCCGTCATCGACGGCCTGCCGATGCCGACGGAAG ACGAGCATCGCCGCTGGCTCGCACGCTACGAGCAGTACAAGTCGAGGCCGCTGCCGCAGTCGCGCACGTCTTCGGCGCGC AAGGCGGTGTCGGCCGTCAACTATGCGCTGAAGCTTGCCACGCAAGGCGTGGCGCGCAAACGTTTGAACACGGTGCGGGC GACGAACGGCGCGAGTGCGCCGGCCCAGGCGAAAGCGCTGACGGTGAAGGAGCTGTCGGCGCTGCGCTACGTGTTCCTGC CGCTGCAGGTGTCGGGGGACACGCAGATCAAGCTGCATTCGGACGTCGACAACCTGAAGGCGATCCAACTGGCGTTCGAG CATGCGGCGAACGTCAGCGCCGATCTGATCGTCAAGCTGCATCCGGCCGAGTGCGACGCGGCCGTGATCGACGAGGTGGT GCGGATGCAGCAGGTCTACCACTTCGATCTCGTCACGTCGCCGACCACCGATCTGATCAAGCACGCGCATTCGGTCGTCA CGATCAATTCGACAGTCGGCCTCGAGGCGCTGCTGTACGGCAAGCCGGTCATGTCGCTCGGCCGCTGCTTCTACAAGGAG TTCGATCGCGTGAGACTGCTCAAGTACATCCACGCGTTTCTGATCGACGGCATCGATTACTTCGGCAAAGAGGACATCGC GCCGCGCGCCGCGAGAAACGTATTTTCGATGAAACACTGA
Upstream 100 bases:
>100_bases CGATTCGATGGAGCGTTACTACTTTGCCGCGCGGCTCGTGAAGGCGGTCAGACAGGAGTTCGACTTTCTGTTCGCAACGA GCGAGCCGGTCGCGCATCTG
Downstream 100 bases:
>100_bases CATGCGCACGACGCTGAAACAGACAATCGGCGCGATCGCCGAGGATTGCCGGCGCAACGCGTTCTTCAAGACGCGCTGCG TCGTCGTGTTCTTCCGGATC
Product: capsule polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Capsule Polysaccharide Biosynthesis
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MALGAGLRSVYLRRGASVSGARDAPAAIRSDASIEVLNGQMASGLARADAAAVFAVMSGVFRRYCVSQCLMWNGQQLVCR AVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRNPAVIDGLPMPTEDEHRRWLARYEQYKSRPLPQSRTSSAR KAVSAVNYALKLATQGVARKRLNTVRATNGASAPAQAKALTVKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIQLAFE HAANVSADLIVKLHPAECDAAVIDEVVRMQQVYHFDLVTSPTTDLIKHAHSVVTINSTVGLEALLYGKPVMSLGRCFYKE FDRVRLLKYIHAFLIDGIDYFGKEDIAPRAARNVFSMKH
Sequences:
>Translated_359_residues MALGAGLRSVYLRRGASVSGARDAPAAIRSDASIEVLNGQMASGLARADAAAVFAVMSGVFRRYCVSQCLMWNGQQLVCR AVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRNPAVIDGLPMPTEDEHRRWLARYEQYKSRPLPQSRTSSAR KAVSAVNYALKLATQGVARKRLNTVRATNGASAPAQAKALTVKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIQLAFE HAANVSADLIVKLHPAECDAAVIDEVVRMQQVYHFDLVTSPTTDLIKHAHSVVTINSTVGLEALLYGKPVMSLGRCFYKE FDRVRLLKYIHAFLIDGIDYFGKEDIAPRAARNVFSMKH >Mature_358_residues ALGAGLRSVYLRRGASVSGARDAPAAIRSDASIEVLNGQMASGLARADAAAVFAVMSGVFRRYCVSQCLMWNGQQLVCRA VAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRNPAVIDGLPMPTEDEHRRWLARYEQYKSRPLPQSRTSSARK AVSAVNYALKLATQGVARKRLNTVRATNGASAPAQAKALTVKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIQLAFEH AANVSADLIVKLHPAECDAAVIDEVVRMQQVYHFDLVTSPTTDLIKHAHSVVTINSTVGLEALLYGKPVMSLGRCFYKEF DRVRLLKYIHAFLIDGIDYFGKEDIAPRAARNVFSMKH
Specific function: Unknown
COG id: COG3562
COG function: function code M; Capsule polysaccharide export protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39200; Mature: 39068
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGAGLRSVYLRRGASVSGARDAPAAIRSDASIEVLNGQMASGLARADAAAVFAVMSGV CCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH FRRYCVSQCLMWNGQQLVCRAVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISR HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHCHHHHHHCCC NPAVIDGLPMPTEDEHRRWLARYEQYKSRPLPQSRTSSARKAVSAVNYALKLATQGVARK CCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNTVRATNGASAPAQAKALTVKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIQLAFE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCEEEECCCCHHHHHHHHHHH HAANVSADLIVKLHPAECDAAVIDEVVRMQQVYHFDLVTSPTTDLIKHAHSVVTINSTVG HHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHEEEEECCCC LEALLYGKPVMSLGRCFYKEFDRVRLLKYIHAFLIDGIDYFGKEDIAPRAARNVFSMKH HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure ALGAGLRSVYLRRGASVSGARDAPAAIRSDASIEVLNGQMASGLARADAAAVFAVMSGV CCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH FRRYCVSQCLMWNGQQLVCRAVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISR HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHCHHHHHHCCC NPAVIDGLPMPTEDEHRRWLARYEQYKSRPLPQSRTSSARKAVSAVNYALKLATQGVARK CCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNTVRATNGASAPAQAKALTVKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIQLAFE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCEEEECCCCHHHHHHHHHHH HAANVSADLIVKLHPAECDAAVIDEVVRMQQVYHFDLVTSPTTDLIKHAHSVVTINSTVG HHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHEEEEECCCC LEALLYGKPVMSLGRCFYKEFDRVRLLKYIHAFLIDGIDYFGKEDIAPRAARNVFSMKH HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA