Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is wcaB [H]
Identifier: 83721198
GI number: 83721198
Start: 1536060
End: 1536590
Strand: Direct
Name: wcaB [H]
Synonym: BTH_I1357
Alternate gene names: 83721198
Gene position: 1536060-1536590 (Clockwise)
Preceding gene: 83719648
Following gene: 83721188
Centisome position: 40.32
GC content: 65.91
Gene sequence:
>531_bases ATGCGCACGACGCTGAAACAGACAATCGGCGCGATCGCCGAGGATTGCCGGCGCAACGCGTTCTTCAAGACGCGCTGCGT CGTCGTGTTCTTCCGGATCGCGAACTATCTCGCGTGCCGCAGCAAGCTGACGCTCGCGCTCGGTGCGCCGGTGATCGCGC TTTACATCGTGGTTTGCGACTGGATCATGGGCGTCGAGATTCCGGTCAAGACGAAGATCGGCAAGGGCCTCACGCTGTAT CACGGCACGGGGCTCGTCATCAACGGCTATTGCGAGATCGGGGAGCGTTGCGTGGTGCGTCACGGCGTGACGATCGGCAA TACGCTGCGGCCGGACGGCTCATACAGCGGCGTGCCGACTGTCGGCGACGACGTCGAGTTCGGTGCGCACAGCATCGCGC TCGGAGAGATTCGGATCGGCCATCGCGCGCGCATCGGCGCAGGCGCCGTGCTGCTGCGGGACGTGCCGGACGGCGGCGTC GCAGTGGGCGTGCCGGCGCGCGTGCTCGAGAAGGAGAAGAGCGCAGCATGA
Upstream 100 bases:
>100_bases AAGTACATCCACGCGTTTCTGATCGACGGCATCGATTACTTCGGCAAAGAGGACATCGCGCCGCGCGCCGCGAGAAACGT ATTTTCGATGAAACACTGAC
Downstream 100 bases:
>100_bases AAGTATTCATCCTCCATCCGGGGAAGGCGAATTACCCGGAAATCGCCGCGTACCGCGACTTTCTCGGCCGGCGCGGCTTC GACGTCCATGAAGGCGACGC
Product: satase isoform II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRTTLKQTIGAIAEDCRRNAFFKTRCVVVFFRIANYLACRSKLTLALGAPVIALYIVVCDWIMGVEIPVKTKIGKGLTLY HGTGLVINGYCEIGERCVVRHGVTIGNTLRPDGSYSGVPTVGDDVEFGAHSIALGEIRIGHRARIGAGAVLLRDVPDGGV AVGVPARVLEKEKSAA
Sequences:
>Translated_176_residues MRTTLKQTIGAIAEDCRRNAFFKTRCVVVFFRIANYLACRSKLTLALGAPVIALYIVVCDWIMGVEIPVKTKIGKGLTLY HGTGLVINGYCEIGERCVVRHGVTIGNTLRPDGSYSGVPTVGDDVEFGAHSIALGEIRIGHRARIGAGAVLLRDVPDGGV AVGVPARVLEKEKSAA >Mature_176_residues MRTTLKQTIGAIAEDCRRNAFFKTRCVVVFFRIANYLACRSKLTLALGAPVIALYIVVCDWIMGVEIPVKTKIGKGLTLY HGTGLVINGYCEIGERCVVRHGVTIGNTLRPDGSYSGVPTVGDDVEFGAHSIALGEIRIGHRARIGAGAVLLRDVPDGGV AVGVPARVLEKEKSAA
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788371, Length=159, Percent_Identity=36.4779874213836, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1790035, Length=154, Percent_Identity=31.8181818181818, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18778; Mature: 18778
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTLKQTIGAIAEDCRRNAFFKTRCVVVFFRIANYLACRSKLTLALGAPVIALYIVVCD CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH WIMGVEIPVKTKIGKGLTLYHGTGLVINGYCEIGERCVVRHGVTIGNTLRPDGSYSGVPT HHHCCCCCEEECCCCCEEEEECCCEEEEEEHHHCHHHHHHCCCEECCEECCCCCCCCCCC VGDDVEFGAHSIALGEIRIGHRARIGAGAVLLRDVPDGGVAVGVPARVLEKEKSAA CCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHCCCC >Mature Secondary Structure MRTTLKQTIGAIAEDCRRNAFFKTRCVVVFFRIANYLACRSKLTLALGAPVIALYIVVCD CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH WIMGVEIPVKTKIGKGLTLYHGTGLVINGYCEIGERCVVRHGVTIGNTLRPDGSYSGVPT HHHCCCCCEEECCCCCEEEEECCCEEEEEEHHHCHHHHHHCCCEECCEECCCCCCCCCCC VGDDVEFGAHSIALGEIRIGHRARIGAGAVLLRDVPDGGVAVGVPARVLEKEKSAA CCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]