Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is recG [H]
Identifier: 83719281
GI number: 83719281
Start: 1429932
End: 1432511
Strand: Direct
Name: recG [H]
Synonym: BTH_I1280
Alternate gene names: 83719281
Gene position: 1429932-1432511 (Clockwise)
Preceding gene: 83720354
Following gene: 83718556
Centisome position: 37.54
GC content: 73.02
Gene sequence:
>2580_bases ATGCCAGTGCCCGTTCGCCGTTCCGTAGCCGATCCCGCCGAAGCCGACGCATTCGCCGACGACGCCGCGTCGGGCGACGC CGCGACCCGCGCCGCGCCCGCTGGGGCGCACGCGACGGACGCGACGGACGCGGGCGCGCCGCATCGGGCGCGCCGCGCGA CGAAGGTGCGCGAGACCCGTGCGTCAAGCGTGAGCGACGCACCGGGCAGCCGGGGCGCCGCGGATGCCGCAGCCCCGTTC GATGCGGCGCCCGGGCAGCCGCCTCACGCGGCGGCCTGGGCGGAATTCGGCGCCGAAGCCGGCGTGCGGTCGTCGACGGC TTCGACGCCGCGCGGCCGCACGGCCGACGGCCGCGTCGTGCCGGCCGCCGCCCAGGCGGCTCGCGCGCCGCGCGCGATGC AAGACGACGCGGCGCCCGCCGGCGACGCGAAGCCCGCCAAACGCGCGGCGAAGTCCGCATCGAAAGCCGCATCCAAGGCC GCGGCCGACGCAGCCGGCGCCAAGGCCGCGCCGAAGTCCCTGAAGACTGCCGACAAGCTCGCGAAGCTCGGCTTGACGCG CGACATCGACCTCGTCCTGCATCTGCCGATGCGCTATGAGGACGAGACGACGCTCACGCCGATGCGCGAATTGCTGCCGG GCGAGACCGCGCAAACGGAAGGCGTCGTGTTCGACAACGAGATCGCGTACCGGCCGCGCCGCCAGTTGCTCGTGAAGCTG CGCGACGACGACGGCGCCGAGCTCGTGCTGCGCTTTCTGAACTTCTACGGCTCGCAGGTCAAGCAGATGGCGGTCGGCCA GCGGCTGCGCGTGCGCGGCGACGTGCGCGGCGGCTTCTTCGGCCTGGAGATCGTGCATCCGAGCGTGAGGGTCGTCGACG AGGACGCGCCGCTGCCGCAGGCGCTCACGCCCGTCTATCCGAGCACGGCGGGCGTGTCGCAGGCGTATCTGCGCAAGGCG ATCGACAATGCGTTGACCCGCACGCCGCTGCCCGAGCTGTTGCCGCCGGAGGTCGCGCGTGCGTATCTGCAGCCGCTCGA CGTGCCGTCCCTCGCCGATGCCGTGCGGATTCTGCATCACCCGGGCGTCGGCGCGGACGAGACCGCGCTCATCGACGGCA CGCACCCCGCTTGGACGCGCATCAAGTTCGACGAGCTGCTCGCGCAGCAACTGTCGCTCAAGCGCGCGCACGAGGAGCGC CGCACGCGCGCCGCCCCCGCGATGCCGCGCCGCGCGCGCGACGATGGCGCGTCGCTGTCCGCGCGCCTGTACGCGGCGCT GCCGTTCACGCTGACGGCCGCGCAGGAGCGGGTCGTCGCGGAGATCGCGCACGATCTCACGCAGCCGCACCCGATGCAGC GCCTGCTGCAGGGCGACGTCGGCAGCGGCAAGACGGTCGTCGCGGCGCTGGCCGCCGCGCAGGCGATCGACGCGGGCTAC CAGGCCGCGCTGATGGCGCCGACCGAAATCCTCGCCGAGCAGCACGCGCGCAAGCTGCGCGGCTGGCTAGAGCCGCTCGG CGTGTCGGTCGCGTGGCTCGCCGGCAGCCTGAAGACGAAGGACAAGCGCGCGGCGCTCGAGGCGGCCGCGCTCGGCACCG CGCGGCTCGTGATCGGCACGCACGCGATGATTCAGGACACCGTCGAATTCGCGCGGCTCGGGCTCGTGATCGTCGACGAG CAGCACCGCTTCGGCGTCGAGCAGCGCCTCGCGTTGCGCGCGAAGGCGGCGAACGCGGCCGACGGCGCGGCGGGCTTTCA GCCGCACCAGTTGATGATGTCGGCCACGCCGATCCCGCGCACGCTCGCGATGACGTATTACGCGGATCTCGACGTGTCGA CGATCGACGAGTTGCCGCCCGGCCGCACGCCGATCCTCACGCGGCTCGTGTCGGATGCGCGCCGCGACGAGGTGATCGGG CGCGTGCGCGAGGCGGCGCTCGCGGGCCGCCAGGTGTACTGGGTATGCCCGCTCATCGAGGAAAGCGAGACGCTGCAGTT GCAGACGGCCGTCGAGACCTACGAGACGCTCGCCGCCGCGCTGCCCGAGCTGAAGGTGGGGCTCGTGCACGGCCGGCTCG CGCCCGCGGAGAAAGCGGCCGTGATGGACGCGTTCTCGCGCAACGACGTGCAACTGCTCGTCGCGACGACGGTGATCGAA GTCGGCGTCGACGTGCCGAACGCGTCGCTGATGGTGATCGAGCACGCCGAGCGCTTCGGGCTCGCGCAATTGCACCAGTT GCGCGGGCGCGTCGGGCGCGGCACCGCCGCGTCGGTGTGCGTGCTGATGTATAGCGGGCCGCTGTCGATCGCGGGCCGCG CGCGGCTGAAGACGATGCGCGAGACGACCGACGGCTTCGAGATCGCGCGCCGCGATCTGGAGATTCGCGGCCCCGGCGAG TTTCTCGGCGCGCGCCAGTCCGGCGCGGCGATGCTGCGCTTCGCGGATCTGGAAAACGACGGCTGGCTGATCGAGCCGGC GCGCGACGCGGCCGCGCACCTCATCGCCGGCCATCCGGACGTCGTCGCGCAGCATCTCGCGCGCTGGCTCGGCGCGCGCG AGCAGTACCTGAAGGCTTGA
Upstream 100 bases:
>100_bases CACGCGCGAGCCGCTATGATGGCGGGGTTGCGCGGCTTGGCCGGCGTCGCTCGTTGGGGCGACGTGAAAGCCGCTATTGT ACTTGCTAGCCTTCCGACCG
Downstream 100 bases:
>100_bases GCGTTCGGCGTGGCGGCCGCGCGCGCCGCGACAGCGGATCTTTTCGGCGAAGGTTGGCGAATCGGCCCAAACCAGTGTAT AAATTTAATCTATCGTCATT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 859; Mature: 858
Protein sequence:
>859_residues MPVPVRRSVADPAEADAFADDAASGDAATRAAPAGAHATDATDAGAPHRARRATKVRETRASSVSDAPGSRGAADAAAPF DAAPGQPPHAAAWAEFGAEAGVRSSTASTPRGRTADGRVVPAAAQAARAPRAMQDDAAPAGDAKPAKRAAKSASKAASKA AADAAGAKAAPKSLKTADKLAKLGLTRDIDLVLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKL RDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPSVRVVDEDAPLPQALTPVYPSTAGVSQAYLRKA IDNALTRTPLPELLPPEVARAYLQPLDVPSLADAVRILHHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEER RTRAAPAMPRRARDDGASLSARLYAALPFTLTAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGY QAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLKTKDKRAALEAAALGTARLVIGTHAMIQDTVEFARLGLVIVDE QHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIG RVREAALAGRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIE VGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGE FLGARQSGAAMLRFADLENDGWLIEPARDAAAHLIAGHPDVVAQHLARWLGAREQYLKA
Sequences:
>Translated_859_residues MPVPVRRSVADPAEADAFADDAASGDAATRAAPAGAHATDATDAGAPHRARRATKVRETRASSVSDAPGSRGAADAAAPF DAAPGQPPHAAAWAEFGAEAGVRSSTASTPRGRTADGRVVPAAAQAARAPRAMQDDAAPAGDAKPAKRAAKSASKAASKA AADAAGAKAAPKSLKTADKLAKLGLTRDIDLVLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKL RDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPSVRVVDEDAPLPQALTPVYPSTAGVSQAYLRKA IDNALTRTPLPELLPPEVARAYLQPLDVPSLADAVRILHHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEER RTRAAPAMPRRARDDGASLSARLYAALPFTLTAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGY QAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLKTKDKRAALEAAALGTARLVIGTHAMIQDTVEFARLGLVIVDE QHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIG RVREAALAGRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIE VGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGE FLGARQSGAAMLRFADLENDGWLIEPARDAAAHLIAGHPDVVAQHLARWLGAREQYLKA >Mature_858_residues PVPVRRSVADPAEADAFADDAASGDAATRAAPAGAHATDATDAGAPHRARRATKVRETRASSVSDAPGSRGAADAAAPFD AAPGQPPHAAAWAEFGAEAGVRSSTASTPRGRTADGRVVPAAAQAARAPRAMQDDAAPAGDAKPAKRAAKSASKAASKAA ADAAGAKAAPKSLKTADKLAKLGLTRDIDLVLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLR DDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPSVRVVDEDAPLPQALTPVYPSTAGVSQAYLRKAI DNALTRTPLPELLPPEVARAYLQPLDVPSLADAVRILHHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERR TRAAPAMPRRARDDGASLSARLYAALPFTLTAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQ AALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLKTKDKRAALEAAALGTARLVIGTHAMIQDTVEFARLGLVIVDEQ HRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGR VREAALAGRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEV GVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEF LGARQSGAAMLRFADLENDGWLIEPARDAAAHLIAGHPDVVAQHLARWLGAREQYLKA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=691, Percent_Identity=51.9536903039074, Blast_Score=634, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=393, Percent_Identity=37.9134860050891, Blast_Score=229, Evalue=6e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 91557; Mature: 91426
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPVRRSVADPAEADAFADDAASGDAATRAAPAGAHATDATDAGAPHRARRATKVRETR CCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ASSVSDAPGSRGAADAAAPFDAAPGQPPHAAAWAEFGAEAGVRSSTASTPRGRTADGRVV HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHCCCCCCCCCCCCCCCCCCCEE PAAAQAARAPRAMQDDAAPAGDAKPAKRAAKSASKAASKAAADAAGAKAAPKSLKTADKL CHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AKLGLTRDIDLVLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKL HHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHEEEEE RDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPSVRVVDEDAPLPQ CCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEECCCEEEEECCCCCCC ALTPVYPSTAGVSQAYLRKAIDNALTRTPLPELLPPEVARAYLQPLDVPSLADAVRILHH CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHC PGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGASLS CCCCCCCCEEEECCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH ARLYAALPFTLTAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGY EEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC QAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLKTKDKRAALEAAALGTARLVIGT HHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHH HAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPR HHHHHHHHHHHHCCEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCH TLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIE HHEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEC ESETLQLQTAVETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIE CCCCEEHHHHHHHHHHHHHHCCHHHEEHHHCCCCCHHHHHHHHHHCCCCCEEEHHHHHHH VGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMR HCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCHHHHHHHHH ETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAAHLIAGHPD HCCCHHHHHHHCCEECCCHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHCCCHH VVAQHLARWLGAREQYLKA HHHHHHHHHHCCHHHHHCC >Mature Secondary Structure PVPVRRSVADPAEADAFADDAASGDAATRAAPAGAHATDATDAGAPHRARRATKVRETR CCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ASSVSDAPGSRGAADAAAPFDAAPGQPPHAAAWAEFGAEAGVRSSTASTPRGRTADGRVV HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHCCCCCCCCCCCCCCCCCCCEE PAAAQAARAPRAMQDDAAPAGDAKPAKRAAKSASKAASKAAADAAGAKAAPKSLKTADKL CHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AKLGLTRDIDLVLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKL HHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHEEEEE RDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPSVRVVDEDAPLPQ CCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEECCCEEEEECCCCCCC ALTPVYPSTAGVSQAYLRKAIDNALTRTPLPELLPPEVARAYLQPLDVPSLADAVRILHH CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHC PGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGASLS CCCCCCCCEEEECCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH ARLYAALPFTLTAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGY EEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC QAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLKTKDKRAALEAAALGTARLVIGT HHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHH HAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPR HHHHHHHHHHHHCCEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCH TLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIE HHEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEC ESETLQLQTAVETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIE CCCCEEHHHHHHHHHHHHHHCCHHHEEHHHCCCCCHHHHHHHHHHCCCCCEEEHHHHHHH VGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMR HCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCHHHHHHHHH ETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAAHLIAGHPD HCCCHHHHHHHCCEECCCHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHCCCHH VVAQHLARWLGAREQYLKA HHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]