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The map label for this gene is dapB [H]

Identifier: 83719010

GI number: 83719010

Start: 1353456

End: 1354262

Strand: Direct

Name: dapB [H]

Synonym: BTH_I1208

Alternate gene names: 83719010

Gene position: 1353456-1354262 (Clockwise)

Preceding gene: 83719953

Following gene: 83721248

Centisome position: 35.53

GC content: 68.9

Gene sequence:

>807_bases
ATGTCGTCCATGAAGATTGCGATTGCTGGTGCGTCAGGCCGGATGGGCCGGATGCTGATCGAAGCGGTGCTCGCCGCGCC
CGACGCGACGCTCGTCGGCGCGCTCGACCGCACGGGCTCGCCGCAGCTCGGCCAGGACGCGGGTGCGTTCCTCGGCAAGC
AGACCGGGGTCGCGCTCACCGACGATATCGAGCGCGTGTGCGCCGAAGCCGATTACCTGATCGACTTCACGCTCCCCGAG
GGCACGCTCGTCCACCTGGACGCGGCGCTGCGCCACGACGTGAAGCTCGTGATCGGCACGACGGGCTTCAGCGAGCCGCA
GAAGGCGCAGTTGCGCGCGGCGGGCGAGAAGATCGCGCTCGTGTTCTCGGCGAACATGAGCGTCGGCGTGAACGTCACGA
TGAAGCTGCTCGAATTCGCGGCGAAGCAGTTCGCGCAGGGCTACGACATCGAGATCATCGAGGCGCATCACCGGCACAAG
GTCGACGCGCCGTCCGGCACCGCGCTGATGATGGGCGAGACGATCGCCGCCGCGACGGGCCGCTCGCTCGACGATTGCGC
GGTCTACGGCCGCCACGGCGTGACGGGCGAGCGCGATCCGTCGACGATCGGTTTTTCGGCGATCCGCGGCGGCGACATCG
TCGGCGATCACACGGTGCTCTTCGCCGGCATCGGCGAGCGCATCGAGATCACGCACAAATCGGCGAGCCGCGTGTCATAC
GCGCAAGGGGCGCTGCGCGCCGCGCGCTTCCTCGCCGGCCGCGACGCCGGTTTCTTCGACATGCAGGACGTGCTCGGCCT
GCGCTGA

Upstream 100 bases:

>100_bases
CATCCGGCGCGCAGGGGGCCGGCGGCTGATCCGGCGCAGTCCGGGCCAAACCGGGGCGGCGCGCGCCGCCCGTCTTTCAT
TCGTAGCAAGCAGGTAGCGC

Downstream 100 bases:

>100_bases
GCGCCATTTCCGGGCATCGATGGCGACCCCGACCGGCATCCTCCATTACCTCGAGAGCGGCGACGCCGTCACGCACGCGG
TCGCTTACGTGCTGCTCGCG

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPE
GTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHK
VDAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDHTVLFAGIGERIEITHKSASRVSY
AQGALRAARFLAGRDAGFFDMQDVLGLR

Sequences:

>Translated_268_residues
MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPE
GTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHK
VDAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDHTVLFAGIGERIEITHKSASRVSY
AQGALRAARFLAGRDAGFFDMQDVLGLR
>Mature_267_residues
SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPEG
TLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHKV
DAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDHTVLFAGIGERIEITHKSASRVSYA
QGALRAARFLAGRDAGFFDMQDVLGLR

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=268, Percent_Identity=57.4626865671642, Blast_Score=283, Evalue=8e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 28214; Mature: 28082

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALT
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEH
DDIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIAL
HHHHHHHCCCCEEEEEECCCCEEEEEEHHHHCCEEEEEEECCCCCCHHHHHHHCCCEEEE
VFSANMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHKVDAPSGTALMMGETIAAATG
EEECCCEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHCC
RSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDHTVLFAGIGERIEITHKSASRVSY
CCCHHHHEECCCCCCCCCCCCCCCCEEECCCCEECCCEEEEECCCCEEEEECCCCHHHHH
AQGALRAARFLAGRDAGFFDMQDVLGLR
HHHHHHHHHHHHCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALT
CCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEH
DDIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIAL
HHHHHHHCCCCEEEEEECCCCEEEEEEHHHHCCEEEEEEECCCCCCHHHHHHHCCCEEEE
VFSANMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHKVDAPSGTALMMGETIAAATG
EEECCCEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHCC
RSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDHTVLFAGIGERIEITHKSASRVSY
CCCHHHHEECCCCCCCCCCCCCCCCEEECCCCEECCCEEEEECCCCEEEEECCCCHHHHH
AQGALRAARFLAGRDAGFFDMQDVLGLR
HHHHHHHHHHHHCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA