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The map label for this gene is omlA [H]

Identifier: 83719953

GI number: 83719953

Start: 1352581

End: 1353384

Strand: Direct

Name: omlA [H]

Synonym: BTH_I1207

Alternate gene names: 83719953

Gene position: 1352581-1353384 (Clockwise)

Preceding gene: 83719993

Following gene: 83719010

Centisome position: 35.51

GC content: 72.76

Gene sequence:

>804_bases
GTGCGGAGCACCGTCATCGCAGCTGCCGCCGTGGTCGGACTGGCCGCCTGCTCGTCGTACGACAGCGTGACTCAGCGGAT
CGCGCAGAGCATCACGCCGTATCGGATCACCGTCGTCCAGGGCAACTTCGTGTCGCAGGAAAAGGCGTCGCAACTGCAGG
TCGGCATGTCGCGCGAGCAAGTGCGCGCGCTGCTCGGCACGCCGCTGCTGACCGACATGTTCCATGCGGATCGCTGGGAT
TACGTCTTCTACTTCAAGCGCGGCTCGACATCGGTCGTTCAGCAGCGCGATCTCGTGGTGAATTTCGCGGGCGATCGCCT
CGCTGGCTGGACGGGCGCGGACAACCTGCCGTCCGAGCTCGATCTGCTCGCCGACATCGACGGCGACCGCCGCGGCAAGA
AGGCGCGCAAGGCGGCTGCGGCCGCGAGCGCCGCGTCCGCGCCGCAAGTCGCCGCCGCGCCTGCATCGGCGCCCGAAGCC
GCGCAAGCGATGGATCAGAACGACGCGAACGCACAGGCGGCGCGCGCGGCGAACCGCGCGACCGCGCAGGTGTCCGGCCA
AAGCGGCGCGGCGGCCCGTTTCTCGCCGTCCGCGCAGATGGCGCCGAACGCGCCGACCCCGGGCGGCCTGCCGCCCGGCG
CCGCGCCCGCGATCCAGCCGCAGTTCCAGTTCCATCGTCCGCCTCCGCCGTCCGCACAAGGCGGCGCGAGCCTGCCGGTC
GGCCCGCAGGGCGCCGACAGCCTGCCGAACCAGCCGCTCACGGCGCCCGCGCCCGCATCCGGCGCGCAGGGGGCCGGCGG
CTGA

Upstream 100 bases:

>100_bases
CTTTTCAGTCATCTGTGACATTCTCGCGCGGCCTTGGACAAGGGCCAGCACGGTGAGGGACATGATTCCAAGATCGCTTT
TGCAACTTCAGAGGAGCCGC

Downstream 100 bases:

>100_bases
TCCGGCGCAGTCCGGGCCAAACCGGGGCGGCGCGCGCCGCCCGTCTTTCATTCGTAGCAAGCAGGTAGCGCATGTCGTCC
ATGAAGATTGCGATTGCTGG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRSTVIAAAAVVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWD
YVFYFKRGSTSVVQQRDLVVNFAGDRLAGWTGADNLPSELDLLADIDGDRRGKKARKAAAAASAASAPQVAAAPASAPEA
AQAMDQNDANAQAARAANRATAQVSGQSGAAARFSPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPSAQGGASLPV
GPQGADSLPNQPLTAPAPASGAQGAGG

Sequences:

>Translated_267_residues
MRSTVIAAAAVVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWD
YVFYFKRGSTSVVQQRDLVVNFAGDRLAGWTGADNLPSELDLLADIDGDRRGKKARKAAAAASAASAPQVAAAPASAPEA
AQAMDQNDANAQAARAANRATAQVSGQSGAAARFSPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPSAQGGASLPV
GPQGADSLPNQPLTAPAPASGAQGAGG
>Mature_267_residues
MRSTVIAAAAVVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWD
YVFYFKRGSTSVVQQRDLVVNFAGDRLAGWTGADNLPSELDLLADIDGDRRGKKARKAAAAASAASAPQVAAAPASAPEA
AQAMDQNDANAQAARAANRATAQVSGQSGAAARFSPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPSAQGGASLPV
GPQGADSLPNQPLTAPAPASGAQGAGG

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=120, Percent_Identity=35.8333333333333, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 27208; Mature: 27208

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSTVIAAAAVVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQ
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHH
VRALLGTPLLTDMFHADRWDYVFYFKRGSTSVVQQRDLVVNFAGDRLAGWTGADNLPSEL
HHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCCCCCCCCCCHHH
DLLADIDGDRRGKKARKAAAAASAASAPQVAAAPASAPEAAQAMDQNDANAQAARAANRA
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
TAQVSGQSGAAARFSPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPSAQGGASLPV
HEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPQGADSLPNQPLTAPAPASGAQGAGG
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSTVIAAAAVVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQ
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHH
VRALLGTPLLTDMFHADRWDYVFYFKRGSTSVVQQRDLVVNFAGDRLAGWTGADNLPSEL
HHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCCCCCCCCCCHHH
DLLADIDGDRRGKKARKAAAAASAASAPQVAAAPASAPEAAQAMDQNDANAQAARAANRA
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
TAQVSGQSGAAARFSPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPSAQGGASLPV
HEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPQGADSLPNQPLTAPAPASGAQGAGG
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]