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The map label for this gene is yeaM [H]

Identifier: 83719001

GI number: 83719001

Start: 2254688

End: 2255551

Strand: Reverse

Name: yeaM [H]

Synonym: BTH_I1991

Alternate gene names: 83719001

Gene position: 2255551-2254688 (Counterclockwise)

Preceding gene: 83719981

Following gene: 83720861

Centisome position: 59.21

GC content: 70.95

Gene sequence:

>864_bases
ATGAGCCCGTCCGTTCCCCTTGTGGCGCAACCTGCCGCCGCCACGATCGACGTTCCGTCCGAATTCGCGCCGACGCGCTC
GCACCCGATGCGCGTGCGCGCCCGCGCGATCTCGGCCGGCATGCGCGTGCCGCAGCACTCGCACGCGTGGGCGCAGCTCG
CGTACGCGTCGCGCGGCGTGCTGCGGCTCGCGACGGCCGGCTCGACGTGGATGGTGCCGCCGTCGCGCGCAATCTGGGTG
CCGCCGCGAATTCCACACGAAGTCGTGATCGTCGAGGACGCGTATCTGCGCACGCTGTATGTCGATGAATCGGCGGTGCC
GGACGGGCTCGACGCGTGCCGGGTCGTCGAGGTGTCGGGCCTGTTGCGCGAGTTGATCGTCGCGCTCGAGGTGCGCCCGC
TCAATCGCGCGCGCGAGCGGCTGCTGGCCGCGCTCGTGCTCGACGAACTCACGCGCGCCGAGCCGTTGCCGCTCGCGGTG
CCGATGCCGACCGAGAAGCGGCTGCGCGCGCTATGCGAAGCGGTGCTCGCGCATCCGGCGCAGGGCGAGTCGCTCGAGCA
CTGGGCGGCGGGCGTCGGTGCGAGCACGCGAACGATCGCGCGGCTCTTCAAGCAGGAACTCGGCGTGAGCTTTTCGCAAT
GGCGCCAGCAGGCGCTGCTCGCGCGTGCGATTCCGCTCCTCAATCAGGGGCGGCCGCTGTCGCACATCGCGCATGAGCTC
GGCTACCAAAGCCAAAGTGCGTTCTCCGCGATGTTCCGGCGCGCGTTCGGCGCGAGCCCGCGCGCATTCATTCAGCGCGG
CGACATGCACGCGGCGACGGAACTTGCGTCGCCCGACGACGGGGATGCGCAACCGCTGCTGTGA

Upstream 100 bases:

>100_bases
GCCGATCCGGCATTATCGGCGAAGAAAATTCCCGCTGCGGCGGGTAGAAGGCTCGCCCTACAATAGCCGAACGCACCATC
CACCCCGTCTTCGAACATCG

Downstream 100 bases:

>100_bases
GCGCGGTCGATTCTCGGGATTCGGGTTGATCCAATGGATTCGGTCACGGAAGCCGCCGAGACCACCAGAGATGCGTACTT
GCGGCCATAAGCGGCGGCTT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MSPSVPLVAQPAAATIDVPSEFAPTRSHPMRVRARAISAGMRVPQHSHAWAQLAYASRGVLRLATAGSTWMVPPSRAIWV
PPRIPHEVVIVEDAYLRTLYVDESAVPDGLDACRVVEVSGLLRELIVALEVRPLNRARERLLAALVLDELTRAEPLPLAV
PMPTEKRLRALCEAVLAHPAQGESLEHWAAGVGASTRTIARLFKQELGVSFSQWRQQALLARAIPLLNQGRPLSHIAHEL
GYQSQSAFSAMFRRAFGASPRAFIQRGDMHAATELASPDDGDAQPLL

Sequences:

>Translated_287_residues
MSPSVPLVAQPAAATIDVPSEFAPTRSHPMRVRARAISAGMRVPQHSHAWAQLAYASRGVLRLATAGSTWMVPPSRAIWV
PPRIPHEVVIVEDAYLRTLYVDESAVPDGLDACRVVEVSGLLRELIVALEVRPLNRARERLLAALVLDELTRAEPLPLAV
PMPTEKRLRALCEAVLAHPAQGESLEHWAAGVGASTRTIARLFKQELGVSFSQWRQQALLARAIPLLNQGRPLSHIAHEL
GYQSQSAFSAMFRRAFGASPRAFIQRGDMHAATELASPDDGDAQPLL
>Mature_286_residues
SPSVPLVAQPAAATIDVPSEFAPTRSHPMRVRARAISAGMRVPQHSHAWAQLAYASRGVLRLATAGSTWMVPPSRAIWVP
PRIPHEVVIVEDAYLRTLYVDESAVPDGLDACRVVEVSGLLRELIVALEVRPLNRARERLLAALVLDELTRAEPLPLAVP
MPTEKRLRALCEAVLAHPAQGESLEHWAAGVGASTRTIARLFKQELGVSFSQWRQQALLARAIPLLNQGRPLSHIAHELG
YQSQSAFSAMFRRAFGASPRAFIQRGDMHAATELASPDDGDAQPLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=251, Percent_Identity=33.8645418326693, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 31287; Mature: 31156

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSVPLVAQPAAATIDVPSEFAPTRSHPMRVRARAISAGMRVPQHSHAWAQLAYASRGV
CCCCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCE
LRLATAGSTWMVPPSRAIWVPPRIPHEVVIVEDAYLRTLYVDESAVPDGLDACRVVEVSG
EEEEECCCEEECCCCCEEECCCCCCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHH
LLRELIVALEVRPLNRARERLLAALVLDELTRAEPLPLAVPMPTEKRLRALCEAVLAHPA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCC
QGESLEHWAAGVGASTRTIARLFKQELGVSFSQWRQQALLARAIPLLNQGRPLSHIAHEL
CCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GYQSQSAFSAMFRRAFGASPRAFIQRGDMHAATELASPDDGDAQPLL
CCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SPSVPLVAQPAAATIDVPSEFAPTRSHPMRVRARAISAGMRVPQHSHAWAQLAYASRGV
CCCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCE
LRLATAGSTWMVPPSRAIWVPPRIPHEVVIVEDAYLRTLYVDESAVPDGLDACRVVEVSG
EEEEECCCEEECCCCCEEECCCCCCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHH
LLRELIVALEVRPLNRARERLLAALVLDELTRAEPLPLAVPMPTEKRLRALCEAVLAHPA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCC
QGESLEHWAAGVGASTRTIARLFKQELGVSFSQWRQQALLARAIPLLNQGRPLSHIAHEL
CCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GYQSQSAFSAMFRRAFGASPRAFIQRGDMHAATELASPDDGDAQPLL
CCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]