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The map label for this gene is ylbK [H]

Identifier: 83720861

GI number: 83720861

Start: 2249644

End: 2250720

Strand: Reverse

Name: ylbK [H]

Synonym: BTH_I1983

Alternate gene names: 83720861

Gene position: 2250720-2249644 (Counterclockwise)

Preceding gene: 83719001

Following gene: 83719922

Centisome position: 59.09

GC content: 71.31

Gene sequence:

>1077_bases
TTGCTTTATGATGTGCGCGCTGCGGCCGCCATGCCGGCGCCGCGCGCAGCCGTCCGACACCGTCGGCGCGGCCGCTGGAA
CTTCGCCGCGCGCGGCGCGCCCATCGAGGCCGCGCGCGGCTCCCCGCTGGAGATCGAGCCGATGTCGTCCCCCCGTTTGT
CCCGCCGCGCGTTCACGCTCGCCTGCGCGTCGGCCGCCCTCGCCGCCTGCACGTCGACCGGCACGAAGCCGACGACGGGC
GCCGCCCCGAGCGCGAACCCTCCGCAGCCGCGCGAAAAGCCGATCAGGGTCGGCATCGCGCTCGGCGGCGGCGCGGCGCG
CGGCTTCGCGCACGTCGGCGTGCTGAAGGCGCTCGAGGCGCGCGGGATTGCAGTCGAGCTCGTCGCCGGCACGAGCGCGG
GCTCGGTCGTCGGCGCGCTGTACGCGTCGGGGATGAGCGCGCTGCAAATCAACAAGCTCGCGCTCACGATGGACGAAGCG
TCGATCAGCGACTGGGCGACGCCGTTCCGCTCCCGCGGCCTGCTGCAAGGCGTCGCGCTGCAGAACTTCATCAACCAGAC
GCTCGCCAACCGGCCGATCGAGAAGATGACCAAGCCGCTCGGCATCGTCGCGACCGATCTGAAGAGCGGCCAGCCGATCC
TGTTCCAGCGCGGCAACACGGGGCTCGCGGTACGCGCGTCGTGCAGCGTGCCGTCGGTGTTCGAGCCGGTGCGCATCGGC
GCTCGCGAATATGTCGACGGCGGGCTCGTGAGCCCCGTGCCCGCGTCGTTCGCGCGCAAGATGGGCGCGGACTTCGTGAT
CGCGGTCGACATCTCCGCGCGCCCGGACGGCGCGGCAACCGGCAATCCGATCGAGATGCTGCTGCAGACGTTCACGATCA
TGGGCCAGACGATCAAGACCTATGAACTCGACAAGTACGCCGACGTCGTGATCCGCCCGAACCTCGCCGCGATGGGCGGC
AGCGACTTCAATCGGCGCAACGCGGCGATCCTCGCGGGCGAGGAAGCGGTCGCGCGAATCATGCCGGAACTGCAGCGCAA
GCTCGCGGCCGCGCGCTCGTCGACCGAGGCCGCCTGA

Upstream 100 bases:

>100_bases
ATGCCGCCATCCTCGCCGAAGTCCGCCCGAATTGCCCATCGTCCTTTCGGCCGACGATCGCACCGTCTCGCGCCCCCGAC
TTTCGTGCGCACGCGGCCAG

Downstream 100 bases:

>100_bases
CGCCGCGAGGCCGCCTGACGCCGGCTTGCGTCGAAGAGCCTTCACGCACACCGCCGAACGCCGCCCTCCGACGCGCGTGC
CGAGTCACGTCACATCGAGA

Product: patatin-like phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MLYDVRAAAAMPAPRAAVRHRRRGRWNFAARGAPIEAARGSPLEIEPMSSPRLSRRAFTLACASAALAACTSTGTKPTTG
AAPSANPPQPREKPIRVGIALGGGAARGFAHVGVLKALEARGIAVELVAGTSAGSVVGALYASGMSALQINKLALTMDEA
SISDWATPFRSRGLLQGVALQNFINQTLANRPIEKMTKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIG
AREYVDGGLVSPVPASFARKMGADFVIAVDISARPDGAATGNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGG
SDFNRRNAAILAGEEAVARIMPELQRKLAAARSSTEAA

Sequences:

>Translated_358_residues
MLYDVRAAAAMPAPRAAVRHRRRGRWNFAARGAPIEAARGSPLEIEPMSSPRLSRRAFTLACASAALAACTSTGTKPTTG
AAPSANPPQPREKPIRVGIALGGGAARGFAHVGVLKALEARGIAVELVAGTSAGSVVGALYASGMSALQINKLALTMDEA
SISDWATPFRSRGLLQGVALQNFINQTLANRPIEKMTKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIG
AREYVDGGLVSPVPASFARKMGADFVIAVDISARPDGAATGNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGG
SDFNRRNAAILAGEEAVARIMPELQRKLAAARSSTEAA
>Mature_358_residues
MLYDVRAAAAMPAPRAAVRHRRRGRWNFAARGAPIEAARGSPLEIEPMSSPRLSRRAFTLACASAALAACTSTGTKPTTG
AAPSANPPQPREKPIRVGIALGGGAARGFAHVGVLKALEARGIAVELVAGTSAGSVVGALYASGMSALQINKLALTMDEA
SISDWATPFRSRGLLQGVALQNFINQTLANRPIEKMTKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIG
AREYVDGGLVSPVPASFARKMGADFVIAVDISARPDGAATGNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGG
SDFNRRNAAILAGEEAVARIMPELQRKLAAARSSTEAA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656037, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI260656043, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI260656039, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI260656041, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI116256487, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI148727335, Length=193, Percent_Identity=33.6787564766839, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI148727290, Length=193, Percent_Identity=33.6787564766839, Blast_Score=92, Evalue=5e-19,
Organism=Escherichia coli, GI226510936, Length=306, Percent_Identity=33.0065359477124, Blast_Score=142, Evalue=5e-35,
Organism=Saccharomyces cerevisiae, GI6323581, Length=186, Percent_Identity=29.0322580645161, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281376913, Length=189, Percent_Identity=31.2169312169312, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571388, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 37443; Mature: 37443

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYDVRAAAAMPAPRAAVRHRRRGRWNFAARGAPIEAARGSPLEIEPMSSPRLSRRAFTL
CCEECCHHHCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHH
ACASAALAACTSTGTKPTTGAAPSANPPQPREKPIRVGIALGGGAARGFAHVGVLKALEA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
RGIAVELVAGTSAGSVVGALYASGMSALQINKLALTMDEASISDWATPFRSRGLLQGVAL
CCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHCHHHHCCHHHHHHH
QNFINQTLANRPIEKMTKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIG
HHHHHHHHHCCCHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHCC
AREYVDGGLVSPVPASFARKMGADFVIAVDISARPDGAATGNPIEMLLQTFTIMGQTIKT
HHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHE
YELDKYADVVIRPNLAAMGGSDFNRRNAAILAGEEAVARIMPELQRKLAAARSSTEAA
EECCCCCCEEECCCHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLYDVRAAAAMPAPRAAVRHRRRGRWNFAARGAPIEAARGSPLEIEPMSSPRLSRRAFTL
CCEECCHHHCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHH
ACASAALAACTSTGTKPTTGAAPSANPPQPREKPIRVGIALGGGAARGFAHVGVLKALEA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
RGIAVELVAGTSAGSVVGALYASGMSALQINKLALTMDEASISDWATPFRSRGLLQGVAL
CCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHCHHHHCCHHHHHHH
QNFINQTLANRPIEKMTKPLGIVATDLKSGQPILFQRGNTGLAVRASCSVPSVFEPVRIG
HHHHHHHHHCCCHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHCC
AREYVDGGLVSPVPASFARKMGADFVIAVDISARPDGAATGNPIEMLLQTFTIMGQTIKT
HHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHE
YELDKYADVVIRPNLAAMGGSDFNRRNAAILAGEEAVARIMPELQRKLAAARSSTEAA
EECCCCCCEEECCCHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]