| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is phaP [H]
Identifier: 83718918
GI number: 83718918
Start: 2113298
End: 2113873
Strand: Reverse
Name: phaP [H]
Synonym: BTH_I1867
Alternate gene names: 83718918
Gene position: 2113873-2113298 (Counterclockwise)
Preceding gene: 83720359
Following gene: 83720581
Centisome position: 55.49
GC content: 64.06
Gene sequence:
>576_bases ATGTCCTTGCTGACCCCCGAGCAAATCGCCGCCGCCCAGAAAGCCAACATCGAAAGCCTCTTCGGCCTCACGACGAAGGC GTTCGAAGGCGTCGAAAAGCTGATCGAACTGAATCTGCAAGTGGTGAAGTCGACGCTCGCTGAAAGCCAGGAAAACGTTC AGCGCGCGCTGTCGGTGAAGGACGCGCAGGAACTGCTCGCGCTGCAGGCAAGCCTCACGCAGCCGATCGCCGAAAAGGTG CTCGCGTACGGTCGCCACGTGTACGAAATCGCATCGGCCACGCAAGCCGAATTCGCGAAGGTCGCCGAGGCGCAATACGA GGAACAGAACCGCAAGGTGCAGGCGCTCGTCGACAACGTCGCGAAGAACGCGCCGGCCGGCTCGGAAACCGCCGTCGCCG CGCTGAAGTCGGCGATCAACGCCGCGAACACGACGTACGAAACGGTGCAGAAGGCTGCGAAGCAAGCGGTCGAAATCGCC GAAACGAACTTCAACGCCGCCGCCGCCGTCGCCACGAAGGCGGCGAACACCGCGGCCGCCGCGTCGCGTCGCAGCGGCAC CGGCAAGACCGCGTAA
Upstream 100 bases:
>100_bases GGAACCATTGTTGCGTCGCACAAAGCAGTTTCAGGTATCTGTTCTCCAAAGTTGTGCCCTTTTCCTTCACGATCATCGAT CGAACCTCAGGAGCATGAAC
Downstream 100 bases:
>100_bases GCAACGGCGTCATCGCCTGCTCGTTTTGGGGAAAGCCGCGCATTCGCGCGGCTTTTTTCATGGCCGCTCGCCCGCGAACG CCTGCTTCGTCCGCTGCGGC
Product: phasin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSLLTPEQIAAAQKANIESLFGLTTKAFEGVEKLIELNLQVVKSTLAESQENVQRALSVKDAQELLALQASLTQPIAEKV LAYGRHVYEIASATQAEFAKVAEAQYEEQNRKVQALVDNVAKNAPAGSETAVAALKSAINAANTTYETVQKAAKQAVEIA ETNFNAAAAVATKAANTAAAASRRSGTGKTA
Sequences:
>Translated_191_residues MSLLTPEQIAAAQKANIESLFGLTTKAFEGVEKLIELNLQVVKSTLAESQENVQRALSVKDAQELLALQASLTQPIAEKV LAYGRHVYEIASATQAEFAKVAEAQYEEQNRKVQALVDNVAKNAPAGSETAVAALKSAINAANTTYETVQKAAKQAVEIA ETNFNAAAAVATKAANTAAAASRRSGTGKTA >Mature_190_residues SLLTPEQIAAAQKANIESLFGLTTKAFEGVEKLIELNLQVVKSTLAESQENVQRALSVKDAQELLALQASLTQPIAEKVL AYGRHVYEIASATQAEFAKVAEAQYEEQNRKVQALVDNVAKNAPAGSETAVAALKSAINAANTTYETVQKAAKQAVEIAE TNFNAAAAVATKAANTAAAASRRSGTGKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic granule. Note=Associated with the surface of cytoplasmic polyhydroxyalkanoate granules [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018968 [H]
Pfam domain/function: PF09361 Phasin_2 [H]
EC number: NA
Molecular weight: Translated: 20032; Mature: 19900
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLTPEQIAAAQKANIESLFGLTTKAFEGVEKLIELNLQVVKSTLAESQENVQRALSVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAQELLALQASLTQPIAEKVLAYGRHVYEIASATQAEFAKVAEAQYEEQNRKVQALVDNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKNAPAGSETAVAALKSAINAANTTYETVQKAAKQAVEIAETNFNAAAAVATKAANTAAA HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ASRRSGTGKTA HHHCCCCCCCC >Mature Secondary Structure SLLTPEQIAAAQKANIESLFGLTTKAFEGVEKLIELNLQVVKSTLAESQENVQRALSVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAQELLALQASLTQPIAEKVLAYGRHVYEIASATQAEFAKVAEAQYEEQNRKVQALVDNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKNAPAGSETAVAALKSAINAANTTYETVQKAAKQAVEIAETNFNAAAAVATKAANTAAA HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ASRRSGTGKTA HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA