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The map label for this gene is dedA [H]

Identifier: 83718817

GI number: 83718817

Start: 1482442

End: 1483203

Strand: Direct

Name: dedA [H]

Synonym: BTH_I1321

Alternate gene names: 83718817

Gene position: 1482442-1483203 (Clockwise)

Preceding gene: 83718914

Following gene: 83718520

Centisome position: 38.92

GC content: 62.73

Gene sequence:

>762_bases
ATGACAGCGTTGCTTTTTTTGCTTCCGGCCCCTTTGAGGCCGGCGCGCGCTCACTTCGTCACCGACACCAAGGAAACGCA
TTTGGAAACGCTGCTTCATTTCGTCAGTCTCGTCGTGCACATCGATGCATTTCTCGGCGATTTCATCCGGCAGTACGGCG
CCTGGGTCTATCTGGTGCTGTTCCTGATCGTTTTCTGCGAAACGGGGCTCGTGATCTTCCCGTTCCTGCCGGGCGATTCG
CTGCTCTTCATCGCGGGCGCGTTCGCGGCGACGGGCGAAATGACGCTCGCGGGCCTCATCGTGCTGCTGCTCGTCGCGGC
GGTGGGCGGCAATACGGTCAACTATCTGATCGGCCGTGCGATCGGGCCGAAGGTCTTCAATACGCACATTCCGGGGCTGG
AACGCTTTCTCGATCGCGCCGCGCTGCTGAAGACCCACAATTTCTACGAGCGGCACGGCGGCAAGACGCTCGTGCTCGCG
CGCTTCATCCCGGTCGTGCGCACGTTCGCGCCGTTCGTCGCGGGCGCGTCGGCGATGCGCTTCGCGCGCTTTCAGCTGTT
CAACGTGATCGGCGCGCTGATCTGGGTGCTGCTTCTCGTCCTCCTCGGCTACTTCTTCGGCAACATCCCGTTCATTCGTC
ATTACCTGAACGTGATCGTGCTCGTCGGGATCGGCGCGGCGGTGATTCCCGTCGCGATCGGCGCGCTGTGGAAGTTGCTG
CGCCGCAAGCCGGGCGCGCAGAAGACGCAGGCGAACCGCTGA

Upstream 100 bases:

>100_bases
GGAATTATAGCGAGGCCGCGCGACGCACCGCTTGCCGGGTTCGGTGCGCGACGTCGCTCGTCGGCCAAATTTCACGGTCG
CTTAAGGCACTTTCGGTATC

Downstream 100 bases:

>100_bases
CCTGCGTGCGCCGCCCGCGTGCGAGCGGCGAGCGGTGTCGCGGCGCGCGCGGCATCGCGTGAAGGATCGCAACGGCGTGG
CGGCAAGCCACGCCGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTALLFLLPAPLRPARAHFVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVIFPFLPGDS
LLFIAGAFAATGEMTLAGLIVLLLVAAVGGNTVNYLIGRAIGPKVFNTHIPGLERFLDRAALLKTHNFYERHGGKTLVLA
RFIPVVRTFAPFVAGASAMRFARFQLFNVIGALIWVLLLVLLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVAIGALWKLL
RRKPGAQKTQANR

Sequences:

>Translated_253_residues
MTALLFLLPAPLRPARAHFVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVIFPFLPGDS
LLFIAGAFAATGEMTLAGLIVLLLVAAVGGNTVNYLIGRAIGPKVFNTHIPGLERFLDRAALLKTHNFYERHGGKTLVLA
RFIPVVRTFAPFVAGASAMRFARFQLFNVIGALIWVLLLVLLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVAIGALWKLL
RRKPGAQKTQANR
>Mature_252_residues
TALLFLLPAPLRPARAHFVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVIFPFLPGDSL
LFIAGAFAATGEMTLAGLIVLLLVAAVGGNTVNYLIGRAIGPKVFNTHIPGLERFLDRAALLKTHNFYERHGGKTLVLAR
FIPVVRTFAPFVAGASAMRFARFQLFNVIGALIWVLLLVLLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVAIGALWKLLR
RKPGAQKTQANR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=205, Percent_Identity=49.2682926829268, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1789481, Length=169, Percent_Identity=40.2366863905325, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789384, Length=169, Percent_Identity=36.094674556213, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 27864; Mature: 27733

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALLFLLPAPLRPARAHFVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVL
CCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLIVFCETGLVIFPFLPGDSLLFIAGAFAATGEMTLAGLIVLLLVAAVGGNTVNYLIGRA
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGPKVFNTHIPGLERFLDRAALLKTHNFYERHGGKTLVLARFIPVVRTFAPFVAGASAMR
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
FARFQLFNVIGALIWVLLLVLLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVAIGALWKLL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRKPGAQKTQANR
HCCCCCCCCCCCC
>Mature Secondary Structure 
TALLFLLPAPLRPARAHFVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVL
CCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLIVFCETGLVIFPFLPGDSLLFIAGAFAATGEMTLAGLIVLLLVAAVGGNTVNYLIGRA
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGPKVFNTHIPGLERFLDRAALLKTHNFYERHGGKTLVLARFIPVVRTFAPFVAGASAMR
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
FARFQLFNVIGALIWVLLLVLLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVAIGALWKLL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRKPGAQKTQANR
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]