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The map label for this gene is ctrA [H]

Identifier: 83718520

GI number: 83718520

Start: 1490372

End: 1491640

Strand: Direct

Name: ctrA [H]

Synonym: BTH_I1327

Alternate gene names: 83718520

Gene position: 1490372-1491640 (Clockwise)

Preceding gene: 83718817

Following gene: 83719232

Centisome position: 39.13

GC content: 63.51

Gene sequence:

>1269_bases
ATGCTGAAATATTCTATTGCATCTCCAAAAGTGCGACAATTTTCGCCTTCGCCTACATCTGGGGCTCAACGATACATGTC
ACGTTTGTCTTGCAGTGCTTCCTATGTCGCGCTTGCAGTCAGCGCAGCCTTGCTCGTAGGCTGTTCGAGCATCGCCAGCT
CGGGCCCCAGCCGATTTCAGATCGATCGGGCGCCGAGCCACTCGCAGGACGAAGCCCAGGTCCGGGCGAATCTTCCCGCC
ATTCAGGTTGTCGACGTGACCGACGGCGTTGCGCGTCAGCTTTACACCGAGCGTCGCCACGGCGATTTTTCCTCATTGCT
CGGCAACGATGCGCGCTTCCAGCAGCAACTCGGCGTTGGCGACACCATCGAGGTATCGATCTGGGAGGCGCCGCCCGCGA
CGCTGTTCGGCGTCGCGCAGACGAGCGACGCCAAGGCGGGTGCAACCAACGCGAAGGTGACAGTGCTGCCCGATCAGGTG
ATCGACGGCGACGGTACGATCAACGTCCCGTTCGCCGGGCAGATCAAGGCCGTGGGCCATACGCCGGCCGAACTGCAGCG
CATCATCGCGGCGCGGCTGAAGAACATCGCGCATGATCCGCAGGTGCTCGTGAAGTTGTCGCGCAATGCAACCTCCTACG
TGACGATCGTCGGCGACGTCGCGAAGAGCGACCGCATGCCGTTGTCCGCGCGCGGTGAGCGGCTGCTCGATGCGCTCGCG
GCGGCGGGCGGCGTGCGCCAGCCCGTCGACAAGATCACGATTCAGGTGACGCGCGGCAACGTCGTCGCGTCGCTGCCGCT
CGAGTCGGTGATTCGCGATCCGCGGCAGAACGTGCCGCTGCGCGCCGGGGACGTCGTGACGGCGCTGTTCCAGCCGTACA
GCTTCACGGCGCTCGGCGCGACCGGCAAGAACGAGGAAATCAATTTCGAGGCGCAGGGCATCACGCTCGCGCAGGCGCTC
GCGCGGGCGGGCGGCCTGCAGGATGCGCGCTCCGATGCAACCGGGGTCTTCATCTTCCGGCTCGAGGACGCGAACGCGCT
CAAGTGGCCGAACACGCCGGTGCGCACGACGGCCGACGGCAAGGTGCCCGTCGTCTACCGGGTGAACCTGCGCGATCCGA
GTTCTTTTTTTGTCGCCCAAAGTTTCATGATGGACAACAAGGACCTGCTTTACGTATCGAACGCACCGATCGCCGAGTTG
CAGAAGTTCCTGAATCTCGTGTTCTCGGTCGCGTATCCTGTCGTGACGGGCGTCCAGACCTTCAAGTAA

Upstream 100 bases:

>100_bases
AGAATACGAATCGCTTGGATGATCTTTACGCGTGCAATCGGACAACTATTCGCGCGCGGCTGGCCTTTTTCCGGAGTGCG
TTTGCAATAGGAGACAGTTG

Downstream 100 bases:

>100_bases
GTATGTAACGCGCGCGACGCGGCGGCCGTAGGTGCCGACGCCGTTTGCGGCGCGCGCGATGCGAACGGCCCGTTTGGCAT
CAGCAGCGGGCGGCGACGAT

Product: WcbC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLKYSIASPKVRQFSPSPTSGAQRYMSRLSCSASYVALAVSAALLVGCSSIASSGPSRFQIDRAPSHSQDEAQVRANLPA
IQVVDVTDGVARQLYTERRHGDFSSLLGNDARFQQQLGVGDTIEVSIWEAPPATLFGVAQTSDAKAGATNAKVTVLPDQV
IDGDGTINVPFAGQIKAVGHTPAELQRIIAARLKNIAHDPQVLVKLSRNATSYVTIVGDVAKSDRMPLSARGERLLDALA
AAGGVRQPVDKITIQVTRGNVVASLPLESVIRDPRQNVPLRAGDVVTALFQPYSFTALGATGKNEEINFEAQGITLAQAL
ARAGGLQDARSDATGVFIFRLEDANALKWPNTPVRTTADGKVPVVYRVNLRDPSSFFVAQSFMMDNKDLLYVSNAPIAEL
QKFLNLVFSVAYPVVTGVQTFK

Sequences:

>Translated_422_residues
MLKYSIASPKVRQFSPSPTSGAQRYMSRLSCSASYVALAVSAALLVGCSSIASSGPSRFQIDRAPSHSQDEAQVRANLPA
IQVVDVTDGVARQLYTERRHGDFSSLLGNDARFQQQLGVGDTIEVSIWEAPPATLFGVAQTSDAKAGATNAKVTVLPDQV
IDGDGTINVPFAGQIKAVGHTPAELQRIIAARLKNIAHDPQVLVKLSRNATSYVTIVGDVAKSDRMPLSARGERLLDALA
AAGGVRQPVDKITIQVTRGNVVASLPLESVIRDPRQNVPLRAGDVVTALFQPYSFTALGATGKNEEINFEAQGITLAQAL
ARAGGLQDARSDATGVFIFRLEDANALKWPNTPVRTTADGKVPVVYRVNLRDPSSFFVAQSFMMDNKDLLYVSNAPIAEL
QKFLNLVFSVAYPVVTGVQTFK
>Mature_422_residues
MLKYSIASPKVRQFSPSPTSGAQRYMSRLSCSASYVALAVSAALLVGCSSIASSGPSRFQIDRAPSHSQDEAQVRANLPA
IQVVDVTDGVARQLYTERRHGDFSSLLGNDARFQQQLGVGDTIEVSIWEAPPATLFGVAQTSDAKAGATNAKVTVLPDQV
IDGDGTINVPFAGQIKAVGHTPAELQRIIAARLKNIAHDPQVLVKLSRNATSYVTIVGDVAKSDRMPLSARGERLLDALA
AAGGVRQPVDKITIQVTRGNVVASLPLESVIRDPRQNVPLRAGDVVTALFQPYSFTALGATGKNEEINFEAQGITLAQAL
ARAGGLQDARSDATGVFIFRLEDANALKWPNTPVRTTADGKVPVVYRVNLRDPSSFFVAQSFMMDNKDLLYVSNAPIAEL
QKFLNLVFSVAYPVVTGVQTFK

Specific function: Involved in transport of capsular polysaccharides to the cell surface. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=317, Percent_Identity=28.7066246056782, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1788376, Length=317, Percent_Identity=26.1829652996845, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 45149; Mature: 45149

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYSIASPKVRQFSPSPTSGAQRYMSRLSCSASYVALAVSAALLVGCSSIASSGPSRFQ
CCEECCCCCCHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
IDRAPSHSQDEAQVRANLPAIQVVDVTDGVARQLYTERRHGDFSSLLGNDARFQQQLGVG
ECCCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCC
DTIEVSIWEAPPATLFGVAQTSDAKAGATNAKVTVLPDQVIDGDGTINVPFAGQIKAVGH
CEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECHHEECCCCEEECCCCCEEEECCC
TPAELQRIIAARLKNIAHDPQVLVKLSRNATSYVTIVGDVAKSDRMPLSARGERLLDALA
CHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEEEEECHHCCCCCCCHHHHHHHHHHHH
AAGGVRQPVDKITIQVTRGNVVASLPLESVIRDPRQNVPLRAGDVVTALFQPYSFTALGA
HCCCCCCCCEEEEEEEECCCEEEECCHHHHHCCHHHCCCCCCCHHHHHHHCCCCEEEECC
TGKNEEINFEAQGITLAQALARAGGLQDARSDATGVFIFRLEDANALKWPNTPVRTTADG
CCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCCC
KVPVVYRVNLRDPSSFFVAQSFMMDNKDLLYVSNAPIAELQKFLNLVFSVAYPVVTGVQT
CEEEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHC
FK
CC
>Mature Secondary Structure
MLKYSIASPKVRQFSPSPTSGAQRYMSRLSCSASYVALAVSAALLVGCSSIASSGPSRFQ
CCEECCCCCCHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
IDRAPSHSQDEAQVRANLPAIQVVDVTDGVARQLYTERRHGDFSSLLGNDARFQQQLGVG
ECCCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCC
DTIEVSIWEAPPATLFGVAQTSDAKAGATNAKVTVLPDQVIDGDGTINVPFAGQIKAVGH
CEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECHHEECCCCEEECCCCCEEEECCC
TPAELQRIIAARLKNIAHDPQVLVKLSRNATSYVTIVGDVAKSDRMPLSARGERLLDALA
CHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEEEEECHHCCCCCCCHHHHHHHHHHHH
AAGGVRQPVDKITIQVTRGNVVASLPLESVIRDPRQNVPLRAGDVVTALFQPYSFTALGA
HCCCCCCCCEEEEEEEECCCEEEECCHHHHHCCHHHCCCCCCCHHHHHHHCCCCEEEECC
TGKNEEINFEAQGITLAQALARAGGLQDARSDATGVFIFRLEDANALKWPNTPVRTTADG
CCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCCC
KVPVVYRVNLRDPSSFFVAQSFMMDNKDLLYVSNAPIAELQKFLNLVFSVAYPVVTGVQT
CEEEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHC
FK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1659649; 1371768; 10710307 [H]