Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is hisM [H]
Identifier: 83718785
GI number: 83718785
Start: 1986893
End: 1987606
Strand: Direct
Name: hisM [H]
Synonym: BTH_I1772
Alternate gene names: 83718785
Gene position: 1986893-1987606 (Clockwise)
Preceding gene: 83720040
Following gene: 83721350
Centisome position: 52.16
GC content: 65.27
Gene sequence:
>714_bases ATGATCGAGATCCTGCAGGAATTCGGGCGCGCGTTCTTGTATTGGGACGGCCAGCGCATGTCGGGGCTCGCCGTCACGCT GTGGCTGCTCGTCGCGTCGCTCGGCTTCGGTTTCGTCTGCGCGGTGCCGCTCGCGGTCGCGCGGGTGTCGAAGAACCGCT GGCTGTCGACGCCCGTGCGCTTCTACACGTACGTGTTCCGCGGCACGCCGCTCTATGTGCAACTGCTGCTCATCTACACG GGGATGTACAGCCTTGCGTTCGTTCGCGATCACGCGTTCCTCGACACGTTCTTCAGGAGCGGCATGAACTGCGCGATTCT CGCGTTCGCGCTGAACACCTGCGCGTACACGACCGAGATCTTCGCGGGCGCGATCCGCGCGATTGCGCACGGCGAGGTGG AGGCGGCGCGCGCGTACGGGATGAGCCCGTTCACGATGTATCGCCGGGTGATCCTGCCGTCGTCGCTGCGCCGCGCATTG CCGCTCTACAGCAACGAAGTGATCCTGATGCTGCACGCGACGACGGTCGCGTTCACGGCGACCGTGCCCGACATCCTGAA GGTCGCGCGCGACGCGAATTCGGCGACGTACATGGCGTTCCAGTCGTTCGGAATCGCCGCGCTGATCTATCTTGCGGTAT CGTTCGCACTCGTCGCGGCCTTTCGTCGGGCCGAGCGCCACTGGCTCGCGTATCTCGCGGCCGGCCGTCATTGA
Upstream 100 bases:
>100_bases TCGTCGCGGCGCTCGTCTATCTGGCGATCACGACGGCCTCCAATCTCGTGCTCAAGCAGCTCGAGAAGCGTTATTCCATC GGCGTGAGGCACGCGGAACT
Downstream 100 bases:
>100_bases TTTCACTCCAGGGAGAGCCAGTTGGCAGAGACCACGACCACGAATGCCGCGTGCAAGCTCGAGGCACGGGACATCCACAA GCGCTACGGCGACAACGAGG
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIEILQEFGRAFLYWDGQRMSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPVRFYTYVFRGTPLYVQLLLIYT GMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAGRH
Sequences:
>Translated_237_residues MIEILQEFGRAFLYWDGQRMSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPVRFYTYVFRGTPLYVQLLLIYT GMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAGRH >Mature_237_residues MIEILQEFGRAFLYWDGQRMSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPVRFYTYVFRGTPLYVQLLLIYT GMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAGRH
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788645, Length=232, Percent_Identity=61.6379310344828, Blast_Score=306, Evalue=6e-85, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=35.981308411215, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1788226, Length=194, Percent_Identity=36.0824742268041, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=29.6650717703349, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788646, Length=198, Percent_Identity=29.2929292929293, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1787087, Length=209, Percent_Identity=25.3588516746411, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786874, Length=214, Percent_Identity=27.1028037383178, Blast_Score=60, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26488; Mature: 26488
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEILQEFGRAFLYWDGQRMSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPVR CHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHH FYTYVFRGTPLYVQLLLIYTGMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FAGAIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTA HHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAGRH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIEILQEFGRAFLYWDGQRMSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPVR CHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHH FYTYVFRGTPLYVQLLLIYTGMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FAGAIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTA HHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERHWLAYLAAGRH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]