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The map label for this gene is rfbA [H]

Identifier: 83718612

GI number: 83718612

Start: 1668127

End: 1668960

Strand: Direct

Name: rfbA [H]

Synonym: BTH_I1473

Alternate gene names: 83718612

Gene position: 1668127-1668960 (Clockwise)

Preceding gene: 83719857

Following gene: 83721361

Centisome position: 43.79

GC content: 54.68

Gene sequence:

>834_bases
ATGTCGATAATTAGTGTCTTTACCTCTGCTCCGCGCGATCTCGTAAGCTCGGTCGCGCGGAACGCTTCGCTCATCTGGCA
GATGACGAAGCGGGAAGTCGTCGGCCGCTATCGCGGGTCCGTGTTCGGCTTGGCTTGGTCCTTCTTCAATCCGCTGCTGA
TGCTTGCGGTGTATTCGTTCGTTTTTTCCTTTGTCTTCAAGTCGAGATGGGGAGGCGGAGCAGAAGATCACGGGCGTGCG
CAATTTGCGATGATGCTGTTCGTCGGTATGACGATTCACGGGTTGTTCGCCGAATGTGTCAATCGAGCGCCGAGTCTGAT
TCTGAATAATCCGAGCTATGTGAAGAAGATCGTGTTTCCGCTGGAAATACTGCCTATCGTCGCGCTTCTGTCCGCCTTCT
TTCATACCCTCGTCAGTCTGGCTGTACTGCTGTTGGGTTTTGCCCTGTTCAAGCATTTCATTTTCGCAAGTGCGTTGTTT
TTGCCGATCGTTCTGTTGCCATTGATGCTGATGTCGCTTGGCGTGGCCTGGTTTCTTGCTGCCACGGGCGTGTTCGTGAG
GGATGTTGGGCAGATTACGGGCTTGTTCACGATGGTGCTGATGTTCCTGTCTCCGGTGTTTTATCCGGCATCTGCGTTGC
CGGAAAAGTATCGTTTCTGGCTGGAGCTCAATCCGCTGACGCTGTTCATCGAGCAGTCACGCGGGATACTGCTCGAAGGC
AGAGTGCCGGATTTCCATCCGCTCGGTCTCGCGCTCCTCGGGGGCGTGGTCGTCGCATGCGCGGGCTTCAAGTATTTTCA
GTTGATGCGCAAGGGGTTTGCCGATGTCCTCTGA

Upstream 100 bases:

>100_bases
CGGTTCGGTATCGAACTGCCTGACTGGCGGTATGCAGTAGGGCTGTGCGTCAGAGATCTGCTTTCCCAATGAGATAAGAG
AAGCAACCCGGCTTCACGCG

Downstream 100 bases:

>100_bases
ATTACCGGCAATCAGCGTCCAAGACGTCAGCAAGCACTTTCGCGTATTTGCCAAACCGGCCGACCGCCTGAAGGCCGCAG
TTCGACATCGCATCGGCGGA

Product: ABC-2 type transport system integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSIISVFTSAPRDLVSSVARNASLIWQMTKREVVGRYRGSVFGLAWSFFNPLLMLAVYSFVFSFVFKSRWGGGAEDHGRA
QFAMMLFVGMTIHGLFAECVNRAPSLILNNPSYVKKIVFPLEILPIVALLSAFFHTLVSLAVLLLGFALFKHFIFASALF
LPIVLLPLMLMSLGVAWFLAATGVFVRDVGQITGLFTMVLMFLSPVFYPASALPEKYRFWLELNPLTLFIEQSRGILLEG
RVPDFHPLGLALLGGVVVACAGFKYFQLMRKGFADVL

Sequences:

>Translated_277_residues
MSIISVFTSAPRDLVSSVARNASLIWQMTKREVVGRYRGSVFGLAWSFFNPLLMLAVYSFVFSFVFKSRWGGGAEDHGRA
QFAMMLFVGMTIHGLFAECVNRAPSLILNNPSYVKKIVFPLEILPIVALLSAFFHTLVSLAVLLLGFALFKHFIFASALF
LPIVLLPLMLMSLGVAWFLAATGVFVRDVGQITGLFTMVLMFLSPVFYPASALPEKYRFWLELNPLTLFIEQSRGILLEG
RVPDFHPLGLALLGGVVVACAGFKYFQLMRKGFADVL
>Mature_276_residues
SIISVFTSAPRDLVSSVARNASLIWQMTKREVVGRYRGSVFGLAWSFFNPLLMLAVYSFVFSFVFKSRWGGGAEDHGRAQ
FAMMLFVGMTIHGLFAECVNRAPSLILNNPSYVKKIVFPLEILPIVALLSAFFHTLVSLAVLLLGFALFKHFIFASALFL
PIVLLPLMLMSLGVAWFLAATGVFVRDVGQITGLFTMVLMFLSPVFYPASALPEKYRFWLELNPLTLFIEQSRGILLEGR
VPDFHPLGLALLGGVVVACAGFKYFQLMRKGFADVL

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30779; Mature: 30648

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIISVFTSAPRDLVSSVARNASLIWQMTKREVVGRYRGSVFGLAWSFFNPLLMLAVYSF
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSFVFKSRWGGGAEDHGRAQFAMMLFVGMTIHGLFAECVNRAPSLILNNPSYVKKIVFP
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHH
LEILPIVALLSAFFHTLVSLAVLLLGFALFKHFIFASALFLPIVLLPLMLMSLGVAWFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGVFVRDVGQITGLFTMVLMFLSPVFYPASALPEKYRFWLELNPLTLFIEQSRGILLEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHEEEEECHHEEEEECCCCEEEEC
RVPDFHPLGLALLGGVVVACAGFKYFQLMRKGFADVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIISVFTSAPRDLVSSVARNASLIWQMTKREVVGRYRGSVFGLAWSFFNPLLMLAVYSF
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSFVFKSRWGGGAEDHGRAQFAMMLFVGMTIHGLFAECVNRAPSLILNNPSYVKKIVFP
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHH
LEILPIVALLSAFFHTLVSLAVLLLGFALFKHFIFASALFLPIVLLPLMLMSLGVAWFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGVFVRDVGQITGLFTMVLMFLSPVFYPASALPEKYRFWLELNPLTLFIEQSRGILLEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHEEEEECHHEEEEECCCCEEEEC
RVPDFHPLGLALLGGVVVACAGFKYFQLMRKGFADVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]