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The map label for this gene is abcA [H]

Identifier: 83721361

GI number: 83721361

Start: 1668950

End: 1670359

Strand: Direct

Name: abcA [H]

Synonym: BTH_I1474

Alternate gene names: 83721361

Gene position: 1668950-1670359 (Clockwise)

Preceding gene: 83718612

Following gene: 83720650

Centisome position: 43.81

GC content: 58.79

Gene sequence:

>1410_bases
ATGTCCTCTGAATTACCGGCAATCAGCGTCCAAGACGTCAGCAAGCACTTTCGCGTATTTGCCAAACCGGCCGACCGCCT
GAAGGCCGCAGTTCGACATCGCATCGGCGGACTCGCGAAGTTGGTTCCTGCTCGTTTGCTCGGAACGGAAGGTGCGAGCG
AGTTTCATGCGCTGCAGCATGTGTCGTTTCACGTGCAAAAGGGCGAGACGATCGGAATCATCGGCCGCAACGGCTCGGGA
AAGTCGACGTTGCTGCAGATTATCTGCGGGACGCTCACGCCGTCGGGTGGCCGGGTCGCGATCAATGGGCGCGTTGCCGC
GCTGCTCGAACTCGGAGCAGGCTTCAATCCGGAGTTCACTGGCCGCGAGAACGTATTCATGAATGCGGCGTTGCTCGGGC
TCTCGAAAGCCCAGATCGAAGAGCGGCTCGACGCTATCTTCGCTTTTGCGGATATCGGCGACTTCGTGGATCAACCGGTC
AAGACCTATTCGAGCGGCATGTACGTGCGGCTTGCTTTTGCAGTCATTGCGCACGTCGACGCCGACGTGCTCGTGATCGA
TGAAGCGTTGGCCGTCGGGGACGCATTCTTCACCCAAAAATGCATGCGTTTCCTACGCGCATTCATGGAGCGGGGCACCG
TTCTATTTGTCAGCCACGATACGAACGCGGTCGTCAATCTCTGTACCCGCGTCGTATGGCTCGACAAGGGGCGTGTTCGC
GAAATCGGTCCGGCAAAGGACGTTTGCGATTCGTATCTCGAGGCTTTCTATGAAGAGCAGCATCGCGCATCGGGACGAAG
CGCTCACGCGCCTGAGCGCAGCAGCGTCGTGCGCGCGATAGCCGAAGGCGATATGCGCGATCAGCGCGCACTGCTCGTCA
ATGCGTCGAAGCTGCGAAACGACGTGGAGTTGTTCCAGTTCACTGCGGACGCGAAGAATTTCGGTCTTGGCGGCGCATCG
ATCGAGCACGTCGGCATCGAGGACGGCACGGGAGCGTCGCTGAACTGGGTAGTGGGAGGCGAGATCGTCTGTATCCGTAT
TGCCGTCAAGGCGTTGCAGAACCTGCAGCGCGCCATTGTCGGGTTCATTGTCCGGGATCGGCTCGGGCAAAATCTGTTCG
GCGACAACACGTATCTCACGACGCTCAACGAACCGTTCGCTGTAGCGGCGGGCGAGAGCTTTTCGGTTCGATTCGGGTTC
AGGATGCCGGTTCTGCCGGTGGGTGATTATTCGGTGACGGTCGCCGTTGCCGACGGATCGCAAAGCGACCATGTGATCCA
CCAATGGCTGCACGATGCGGTGCTGTTGAAGTCGCATTCGACGAGTGTTAGTACGGGGTTAATAGGTATTCCAATGCATG
AAATCGTGCTTGAGCGGGATACGCTGAGCGAGATTGGGGCGGCGCAATGA

Upstream 100 bases:

>100_bases
GTGCCGGATTTCCATCCGCTCGGTCTCGCGCTCCTCGGGGGCGTGGTCGTCGCATGCGCGGGCTTCAAGTATTTTCAGTT
GATGCGCAAGGGGTTTGCCG

Downstream 100 bases:

>100_bases
AATCTGAAATACCTGTCACCGTGCCTGAGCGATTCAATACGGCCGACGTGCTGGGGGGGGCACAGCCCACCCGCGTCGCG
GATCGGTCGACGCTTGCGAA

Product: polysaccharide ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSSELPAISVQDVSKHFRVFAKPADRLKAAVRHRIGGLAKLVPARLLGTEGASEFHALQHVSFHVQKGETIGIIGRNGSG
KSTLLQIICGTLTPSGGRVAINGRVAALLELGAGFNPEFTGRENVFMNAALLGLSKAQIEERLDAIFAFADIGDFVDQPV
KTYSSGMYVRLAFAVIAHVDADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVWLDKGRVR
EIGPAKDVCDSYLEAFYEEQHRASGRSAHAPERSSVVRAIAEGDMRDQRALLVNASKLRNDVELFQFTADAKNFGLGGAS
IEHVGIEDGTGASLNWVVGGEIVCIRIAVKALQNLQRAIVGFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGF
RMPVLPVGDYSVTVAVADGSQSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLERDTLSEIGAAQ

Sequences:

>Translated_469_residues
MSSELPAISVQDVSKHFRVFAKPADRLKAAVRHRIGGLAKLVPARLLGTEGASEFHALQHVSFHVQKGETIGIIGRNGSG
KSTLLQIICGTLTPSGGRVAINGRVAALLELGAGFNPEFTGRENVFMNAALLGLSKAQIEERLDAIFAFADIGDFVDQPV
KTYSSGMYVRLAFAVIAHVDADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVWLDKGRVR
EIGPAKDVCDSYLEAFYEEQHRASGRSAHAPERSSVVRAIAEGDMRDQRALLVNASKLRNDVELFQFTADAKNFGLGGAS
IEHVGIEDGTGASLNWVVGGEIVCIRIAVKALQNLQRAIVGFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGF
RMPVLPVGDYSVTVAVADGSQSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLERDTLSEIGAAQ
>Mature_468_residues
SSELPAISVQDVSKHFRVFAKPADRLKAAVRHRIGGLAKLVPARLLGTEGASEFHALQHVSFHVQKGETIGIIGRNGSGK
STLLQIICGTLTPSGGRVAINGRVAALLELGAGFNPEFTGRENVFMNAALLGLSKAQIEERLDAIFAFADIGDFVDQPVK
TYSSGMYVRLAFAVIAHVDADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVWLDKGRVRE
IGPAKDVCDSYLEAFYEEQHRASGRSAHAPERSSVVRAIAEGDMRDQRALLVNASKLRNDVELFQFTADAKNFGLGGASI
EHVGIEDGTGASLNWVVGGEIVCIRIAVKALQNLQRAIVGFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGFR
MPVLPVGDYSVTVAVADGSQSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLERDTLSEIGAAQ

Specific function: Influences the expression of the surface array protein gene (vapA). May have both regulatory and transport activities [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27436953, Length=195, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI6005701, Length=291, Percent_Identity=26.1168384879725, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI27477115, Length=294, Percent_Identity=25.8503401360544, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI153792144, Length=297, Percent_Identity=24.2424242424242, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI27262624, Length=217, Percent_Identity=24.8847926267281, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI27262626, Length=217, Percent_Identity=24.8847926267281, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI150417984, Length=199, Percent_Identity=27.1356783919598, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI31657092, Length=219, Percent_Identity=24.2009132420091, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI27881501, Length=218, Percent_Identity=21.5596330275229, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI30795238, Length=218, Percent_Identity=21.5596330275229, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=28.7037037037037, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87081709, Length=203, Percent_Identity=25.1231527093596, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081791, Length=205, Percent_Identity=23.9024390243902, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786398, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=25.8064516129032, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI48994943, Length=240, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI48995001, Length=213, Percent_Identity=26.7605633802817, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790467, Length=207, Percent_Identity=27.0531400966184, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788210, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1789032, Length=271, Percent_Identity=22.8782287822878, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=24.8868778280543, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=24.5, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789873, Length=199, Percent_Identity=28.643216080402, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081782, Length=267, Percent_Identity=23.5955056179775, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789751, Length=286, Percent_Identity=23.4265734265734, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786703, Length=210, Percent_Identity=30.952380952381, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787029, Length=204, Percent_Identity=25.9803921568627, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082267, Length=213, Percent_Identity=24.8826291079812, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=22.8971962616822, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786981, Length=206, Percent_Identity=26.6990291262136, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1786253, Length=197, Percent_Identity=25.8883248730964, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=295, Percent_Identity=24.406779661017, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI115533608, Length=223, Percent_Identity=24.6636771300448, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17510237, Length=302, Percent_Identity=22.8476821192053, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=243, Percent_Identity=24.6913580246914, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=260, Percent_Identity=25.3846153846154, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=260, Percent_Identity=25.3846153846154, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007184, Length=185, Percent_Identity=25.4054054054054, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221500365, Length=185, Percent_Identity=25.4054054054054, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI62484234, Length=261, Percent_Identity=24.5210727969349, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643674, Length=266, Percent_Identity=24.0601503759398, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.30 [C]

Molecular weight: Translated: 50710; Mature: 50578

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSELPAISVQDVSKHFRVFAKPADRLKAAVRHRIGGLAKLVPARLLGTEGASEFHALQH
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHH
VSFHVQKGETIGIIGRNGSGKSTLLQIICGTLTPSGGRVAINGRVAALLELGAGFNPEFT
HEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCHHEEHHHHCCCCCCCCC
GRENVFMNAALLGLSKAQIEERLDAIFAFADIGDFVDQPVKTYSSGMYVRLAFAVIAHVD
CCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
ADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVWLDKGRVR
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
EIGPAKDVCDSYLEAFYEEQHRASGRSAHAPERSSVVRAIAEGDMRDQRALLVNASKLRN
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHC
DVELFQFTADAKNFGLGGASIEHVGIEDGTGASLNWVVGGEIVCIRIAVKALQNLQRAIV
CHHHEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHH
GFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGFRMPVLPVGDYSVTVAVADGS
HHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCEEECCCCEEEEEEECCC
QSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLERDTLSEIGAAQ
CCHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCHHHHHHCCCCC
>Mature Secondary Structure 
SSELPAISVQDVSKHFRVFAKPADRLKAAVRHRIGGLAKLVPARLLGTEGASEFHALQH
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHH
VSFHVQKGETIGIIGRNGSGKSTLLQIICGTLTPSGGRVAINGRVAALLELGAGFNPEFT
HEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCHHEEHHHHCCCCCCCCC
GRENVFMNAALLGLSKAQIEERLDAIFAFADIGDFVDQPVKTYSSGMYVRLAFAVIAHVD
CCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
ADVLVIDEALAVGDAFFTQKCMRFLRAFMERGTVLFVSHDTNAVVNLCTRVVWLDKGRVR
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
EIGPAKDVCDSYLEAFYEEQHRASGRSAHAPERSSVVRAIAEGDMRDQRALLVNASKLRN
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHC
DVELFQFTADAKNFGLGGASIEHVGIEDGTGASLNWVVGGEIVCIRIAVKALQNLQRAIV
CHHHEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHH
GFIVRDRLGQNLFGDNTYLTTLNEPFAVAAGESFSVRFGFRMPVLPVGDYSVTVAVADGS
HHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCEEECCCCEEEEEEECCC
QSDHVIHQWLHDAVLLKSHSTSVSTGLIGIPMHEIVLERDTLSEIGAAQ
CCHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8491726 [H]