Click here to switch to the map view.

The map label for this gene is 83593981

Identifier: 83593981

GI number: 83593981

Start: 3078671

End: 3079795

Strand: Direct

Name: 83593981

Synonym: Rru_A2649

Alternate gene names: NA

Gene position: 3078671-3079795 (Clockwise)

Preceding gene: 83593980

Following gene: 83593987

Centisome position: 70.73

GC content: 66.76

Gene sequence:

>1125_bases
GTGCGTCTGAGATTTATTTCATCCCACGTGGCCGGGCACCTCGCCGGCGGCTGCTTGGTTTTCGCCCTGGGGCTGGCGCT
GTGCGCGCCGCTCCAGGCCCAGGACACCCACCGTCCCCGGGTGATCCTTGACGGTCGCGATCTGACCGAGCAGGTCTATG
ACGAGCCGCCGATCGACGTCGCCCCCGAAGACATTCCCAATTACCGCGAGATGATGCGCGAGATCATCAGCAAGCTGGCC
GAATACGGCAAGGCCCGCGATCCGGCCTTCCGGGTGCTGGTGCGCGGCGGCACCATGCTGGCGACCCAGTCCAAGCGCGA
GCGTGACCTGTCGATCCTCAAGATCCCGCCCGGCGTGCCGCTGTCCCAGGAAGCGTTGCTGCCGATTGGCGCCCTCCACC
GGCGCTTCGCCCGGGCCATCGATGGTTTCGTCCTGGATCGTCGCTACTGCGATCCCAACGCCCTGGTGACCACCGACGAG
ATCGCCCTGCTCAAGCGCGAGGGCTTCTTTTTCATATCCCTCGAACCCTGCGCCGACGAGGCCCAGGCCCGCGCCGCCGT
CAGCGCCGGTCAGAAGGACGGGGTGATGGTGGCGACCACCACCGAGCCCGACGGGGTGTTCGCCCCCACCGCCAAGATCC
CGCCGGCCCAGGAAAGCCCGGGGCCGATCACCAGCCTGGGTCAGGCGCGCAATCTGCTGGTCGGCCTGAGCACCCGGCGG
TTTGAGACCAAGGATGCCTGGGTCGCCGCCCTTGATCGCACCAATTACGACCTGCTGCTCATCGATCCGTTTTTCCGGAA
CATCGACCCGCTGACCGCCCCCCAGGTCAAGGCGTTGAAGACCAAGGCCGTCGGCGCCCGCCGGCTGGTGCTGGCGCGTC
TGACCATCGGGCTGGCCGATGACACCCGTTATTACTGGAAGCCGGAATGGACCGTGGGCAATCCGCCGTGGATCGTCGGC
TTCGTGCCGGGCGAGGATGGCGTTTACTGGATCAACTACACCCATCCCGACTGGCTGACCCTGGTGGGGGCGGCCTTCGC
CGGATTGATGGATCTGGGCTACGACGGCATCGTGCTTGACGGGGTGACCGCCCTGATGCGCGACGAGGCCCTGATGCCCT
TGTGA

Upstream 100 bases:

>100_bases
CGGCGACCGGCGTTAACGGTTACATAGCCCTCTACGGAATAGAATCGCCCGGATTGACATCCTGTCTGGCAATCGCCGAT
CTGGTGGCGGAGGAAGCCCG

Downstream 100 bases:

>100_bases
AAAAACTACTCCCGGGGGACGGATCCGCCCCCCGGGAGGTCAAGAAAGACGATGTGGAGAGGGTTTATGGGCCGATCGGC
CGAGCCGGAAAACCACCGGC

Product: extracellular endo alpha-1 4 polygalactosaminidase or related polysaccharide hydrolase-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRLRFISSHVAGHLAGGCLVFALGLALCAPLQAQDTHRPRVILDGRDLTEQVYDEPPIDVAPEDIPNYREMMREIISKLA
EYGKARDPAFRVLVRGGTMLATQSKRERDLSILKIPPGVPLSQEALLPIGALHRRFARAIDGFVLDRRYCDPNALVTTDE
IALLKREGFFFISLEPCADEAQARAAVSAGQKDGVMVATTTEPDGVFAPTAKIPPAQESPGPITSLGQARNLLVGLSTRR
FETKDAWVAALDRTNYDLLLIDPFFRNIDPLTAPQVKALKTKAVGARRLVLARLTIGLADDTRYYWKPEWTVGNPPWIVG
FVPGEDGVYWINYTHPDWLTLVGAAFAGLMDLGYDGIVLDGVTALMRDEALMPL

Sequences:

>Translated_374_residues
MRLRFISSHVAGHLAGGCLVFALGLALCAPLQAQDTHRPRVILDGRDLTEQVYDEPPIDVAPEDIPNYREMMREIISKLA
EYGKARDPAFRVLVRGGTMLATQSKRERDLSILKIPPGVPLSQEALLPIGALHRRFARAIDGFVLDRRYCDPNALVTTDE
IALLKREGFFFISLEPCADEAQARAAVSAGQKDGVMVATTTEPDGVFAPTAKIPPAQESPGPITSLGQARNLLVGLSTRR
FETKDAWVAALDRTNYDLLLIDPFFRNIDPLTAPQVKALKTKAVGARRLVLARLTIGLADDTRYYWKPEWTVGNPPWIVG
FVPGEDGVYWINYTHPDWLTLVGAAFAGLMDLGYDGIVLDGVTALMRDEALMPL
>Mature_374_residues
MRLRFISSHVAGHLAGGCLVFALGLALCAPLQAQDTHRPRVILDGRDLTEQVYDEPPIDVAPEDIPNYREMMREIISKLA
EYGKARDPAFRVLVRGGTMLATQSKRERDLSILKIPPGVPLSQEALLPIGALHRRFARAIDGFVLDRRYCDPNALVTTDE
IALLKREGFFFISLEPCADEAQARAAVSAGQKDGVMVATTTEPDGVFAPTAKIPPAQESPGPITSLGQARNLLVGLSTRR
FETKDAWVAALDRTNYDLLLIDPFFRNIDPLTAPQVKALKTKAVGARRLVLARLTIGLADDTRYYWKPEWTVGNPPWIVG
FVPGEDGVYWINYTHPDWLTLVGAAFAGLMDLGYDGIVLDGVTALMRDEALMPL

Specific function: Unknown

COG id: COG2342

COG function: function code G; Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41144; Mature: 41144

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRFISSHVAGHLAGGCLVFALGLALCAPLQAQDTHRPRVILDGRDLTEQVYDEPPIDV
CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCC
APEDIPNYREMMREIISKLAEYGKARDPAFRVLVRGGTMLATQSKRERDLSILKIPPGVP
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCHHCCCEEEECCCCCC
LSQEALLPIGALHRRFARAIDGFVLDRRYCDPNALVTTDEIALLKREGFFFISLEPCADE
CCHHHCCCHHHHHHHHHHHHHHHEEECEECCCCCEEECHHEEEEEECCEEEEEECCCCCH
AQARAAVSAGQKDGVMVATTTEPDGVFAPTAKIPPAQESPGPITSLGQARNLLVGLSTRR
HHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCC
FETKDAWVAALDRTNYDLLLIDPFFRNIDPLTAPQVKALKTKAVGARRLVLARLTIGLAD
EECCCCEEEEECCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHCCHHHHEEEHHEEEECC
DTRYYWKPEWTVGNPPWIVGFVPGEDGVYWINYTHPDWLTLVGAAFAGLMDLGYDGIVLD
CCEEEEECCEECCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEHH
GVTALMRDEALMPL
HHHHHHHCCCCCCC
>Mature Secondary Structure
MRLRFISSHVAGHLAGGCLVFALGLALCAPLQAQDTHRPRVILDGRDLTEQVYDEPPIDV
CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCC
APEDIPNYREMMREIISKLAEYGKARDPAFRVLVRGGTMLATQSKRERDLSILKIPPGVP
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCHHCCCEEEECCCCCC
LSQEALLPIGALHRRFARAIDGFVLDRRYCDPNALVTTDEIALLKREGFFFISLEPCADE
CCHHHCCCHHHHHHHHHHHHHHHEEECEECCCCCEEECHHEEEEEECCEEEEEECCCCCH
AQARAAVSAGQKDGVMVATTTEPDGVFAPTAKIPPAQESPGPITSLGQARNLLVGLSTRR
HHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCC
FETKDAWVAALDRTNYDLLLIDPFFRNIDPLTAPQVKALKTKAVGARRLVLARLTIGLAD
EECCCCEEEEECCCCCCEEEECHHHCCCCCCCCCHHHHHHHHHCCHHHHEEEHHEEEECC
DTRYYWKPEWTVGNPPWIVGFVPGEDGVYWINYTHPDWLTLVGAAFAGLMDLGYDGIVLD
CCEEEEECCEECCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEHH
GVTALMRDEALMPL
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA