Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
---|---|
Accession | NC_007643 |
Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593939
Identifier: 83593939
GI number: 83593939
Start: 3032781
End: 3033320
Strand: Direct
Name: 83593939
Synonym: Rru_A2607
Alternate gene names: NA
Gene position: 3032781-3033320 (Clockwise)
Preceding gene: 83593935
Following gene: 83593940
Centisome position: 69.67
GC content: 55.93
Gene sequence:
>540_bases ATGACAGCCGGAATCGACAGAGACACCATTGAAAACCTGCTGATAAATCTTGGTCAGCACCTTTCGAAACCAACCCAACT TTGTGTGATCGGCAGTAGCGCCGCCCTCATCGCCGGGCAGGCTGAACGTCAGACACTCGATATTGATGTTTGGAACCCCA AGTCTGATTTCGATGTCGGCGACCTGAAGAGGGCCTGCGAGAACTCCGGCGTGCTCTATGACCCCAAAGGCGAAATCGAC CCCACCGCCCTGTATCTTCAGGTCATCCGTCCGGGGATCGTATCATTGCCGATGGACTTTCCGGTCGAGACGCTTGGCAG ATATGGCAATCTGACCCTTGTCATGCCGCCGCCGGATTTGATCGTCGCGGCCAAACTCTCCCGGGGAGAGGATCGCGACC TCGAAGATGCGGTATGGTGGGTCCGAGGCAGAGGTCTCACCGAGCACCGAATCGAAGCGGCGATCGATCAGCTGCCAAAT GACTTCGACCGAGAGACGGCCAAAGAGAACATGGTCTTTATCAAACTTGCGACCAAGTAG
Upstream 100 bases:
>100_bases AAAATCGACCGGGCGGCGTGCCAGATCGGAAATCGGCCGATCGCGTTGACAAGTGAGGGATCCCACCCGATGGTAGAGGG AAGCGGATCGGGGTGAGGAA
Downstream 100 bases:
>100_bases CCAAGATCATGAGACGATCGAAGCGCACCCTTCATGTCGAAGCCATGAACACTCTTTTAAACAACGAGATTATTTCCGTT ATAAAAAATCATGATTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTAGIDRDTIENLLINLGQHLSKPTQLCVIGSSAALIAGQAERQTLDIDVWNPKSDFDVGDLKRACENSGVLYDPKGEID PTALYLQVIRPGIVSLPMDFPVETLGRYGNLTLVMPPPDLIVAAKLSRGEDRDLEDAVWWVRGRGLTEHRIEAAIDQLPN DFDRETAKENMVFIKLATK
Sequences:
>Translated_179_residues MTAGIDRDTIENLLINLGQHLSKPTQLCVIGSSAALIAGQAERQTLDIDVWNPKSDFDVGDLKRACENSGVLYDPKGEID PTALYLQVIRPGIVSLPMDFPVETLGRYGNLTLVMPPPDLIVAAKLSRGEDRDLEDAVWWVRGRGLTEHRIEAAIDQLPN DFDRETAKENMVFIKLATK >Mature_178_residues TAGIDRDTIENLLINLGQHLSKPTQLCVIGSSAALIAGQAERQTLDIDVWNPKSDFDVGDLKRACENSGVLYDPKGEIDP TALYLQVIRPGIVSLPMDFPVETLGRYGNLTLVMPPPDLIVAAKLSRGEDRDLEDAVWWVRGRGLTEHRIEAAIDQLPND FDRETAKENMVFIKLATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19811; Mature: 19680
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGIDRDTIENLLINLGQHLSKPTQLCVIGSSAALIAGQAERQTLDIDVWNPKSDFDVG CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCHH DLKRACENSGVLYDPKGEIDPTALYLQVIRPGIVSLPMDFPVETLGRYGNLTLVMPPPDL HHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCEECCCCCCHHHHCCCCCEEEEECCCCE IVAAKLSRGEDRDLEDAVWWVRGRGLTEHRIEAAIDQLPNDFDRETAKENMVFIKLATK EEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHCCEEEEEEECC >Mature Secondary Structure TAGIDRDTIENLLINLGQHLSKPTQLCVIGSSAALIAGQAERQTLDIDVWNPKSDFDVG CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCHH DLKRACENSGVLYDPKGEIDPTALYLQVIRPGIVSLPMDFPVETLGRYGNLTLVMPPPDL HHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCEECCCCCCHHHHCCCCCEEEEECCCCE IVAAKLSRGEDRDLEDAVWWVRGRGLTEHRIEAAIDQLPNDFDRETAKENMVFIKLATK EEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA