Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593924
Identifier: 83593924
GI number: 83593924
Start: 3012477
End: 3013172
Strand: Direct
Name: 83593924
Synonym: Rru_A2592
Alternate gene names: NA
Gene position: 3012477-3013172 (Clockwise)
Preceding gene: 83593909
Following gene: 83593929
Centisome position: 69.21
GC content: 69.97
Gene sequence:
>696_bases ATGATCCTCACGCCGATCCCGCTCGCCGAGCTTCCCGGGCTGAGCGACGCCTTCGCCCAAGCCCTGGCCGATCATCCCCT GGCCTTGGCGGTTTTCGCCCGGATCGCCGCCACCACGGCGTTCGTGCGCGGCGACACCATCGCTCTTTCAACCGATAGCG ACCACCACGCCGCCGCCCTCGCCCTGGTCCGCAGCTTCGGCATGGGGGTGATCGACGGGCCGCCGGCCAAGGGCTTCACC TGGGATGGTCAGGCGGTGGCCGCCGATATGGAACCCAGCGTGCTGATCCACGAGATCGGCCACTTCCAGGCCTGCGCCCC GGAGCGCCGCCACGTCATCGACTTCGGCCTGGGCGCCGGACCAGAAACCGGCTTGCGCGGCGAGGCCGAAGCGGTCGCCA GCCTGGGCGGCGTCGCCGGCGATCTGGAAGAGGCCTTCGCCTCGCTTTTGGGAATTTTATGGGAGGCCGAGGTCGGCCAA CCGGCGATCCTCGCCTTTCTGGAACAGAACTGGCTGGCCGGCGGCGCAACGGCCGCCAACCGCGCCCATTTCCTCAAGAT CGTCGAAGCCCTCGCCGCCCATGGCTTCCTAAGCCCCGAAGGCCGCCCGACCCGGGCGCTCCGCGAGGTCGACGATCAAA CCTTCCTCGGGCCGCTCCTGGTCGCCCCGCCTCAGGGCGCGCCCAAGGCCTGCTGA
Upstream 100 bases:
>100_bases CTCCGCCCCCGGCCCGCCCGCCCCCGCGCCCCTTGCCAGCCGCGACGCGCCGGTGTAGGGGCTGGGGCCTTTCCCGGCCT CCGTCCAAAGAAGACCGCCG
Downstream 100 bases:
>100_bases CTGATCACCACCTGATTGCGCCCGGCCCGTTTGGCCGCATACAGGGCCTGATCGGCCTCGTTCATCAGGGCGCTAAAGGA GATGGATCGACCATTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MILTPIPLAELPGLSDAFAQALADHPLALAVFARIAATTAFVRGDTIALSTDSDHHAAALALVRSFGMGVIDGPPAKGFT WDGQAVAADMEPSVLIHEIGHFQACAPERRHVIDFGLGAGPETGLRGEAEAVASLGGVAGDLEEAFASLLGILWEAEVGQ PAILAFLEQNWLAGGATAANRAHFLKIVEALAAHGFLSPEGRPTRALREVDDQTFLGPLLVAPPQGAPKAC
Sequences:
>Translated_231_residues MILTPIPLAELPGLSDAFAQALADHPLALAVFARIAATTAFVRGDTIALSTDSDHHAAALALVRSFGMGVIDGPPAKGFT WDGQAVAADMEPSVLIHEIGHFQACAPERRHVIDFGLGAGPETGLRGEAEAVASLGGVAGDLEEAFASLLGILWEAEVGQ PAILAFLEQNWLAGGATAANRAHFLKIVEALAAHGFLSPEGRPTRALREVDDQTFLGPLLVAPPQGAPKAC >Mature_231_residues MILTPIPLAELPGLSDAFAQALADHPLALAVFARIAATTAFVRGDTIALSTDSDHHAAALALVRSFGMGVIDGPPAKGFT WDGQAVAADMEPSVLIHEIGHFQACAPERRHVIDFGLGAGPETGLRGEAEAVASLGGVAGDLEEAFASLLGILWEAEVGQ PAILAFLEQNWLAGGATAANRAHFLKIVEALAAHGFLSPEGRPTRALREVDDQTFLGPLLVAPPQGAPKAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23889; Mature: 23889
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTPIPLAELPGLSDAFAQALADHPLALAVFARIAATTAFVRGDTIALSTDSDHHAAAL CCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH ALVRSFGMGVIDGPPAKGFTWDGQAVAADMEPSVLIHEIGHFQACAPERRHVIDFGLGAG HHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCHHCCCCCCCEEEEECCCCC PETGLRGEAEAVASLGGVAGDLEEAFASLLGILWEAEVGQPAILAFLEQNWLAGGATAAN CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHH RAHFLKIVEALAAHGFLSPEGRPTRALREVDDQTFLGPLLVAPPQGAPKAC HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHCCEEEECCCCCCCCC >Mature Secondary Structure MILTPIPLAELPGLSDAFAQALADHPLALAVFARIAATTAFVRGDTIALSTDSDHHAAAL CCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH ALVRSFGMGVIDGPPAKGFTWDGQAVAADMEPSVLIHEIGHFQACAPERRHVIDFGLGAG HHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCHHCCCCCCCEEEEECCCCC PETGLRGEAEAVASLGGVAGDLEEAFASLLGILWEAEVGQPAILAFLEQNWLAGGATAAN CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHH RAHFLKIVEALAAHGFLSPEGRPTRALREVDDQTFLGPLLVAPPQGAPKAC HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA