Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is efeU [H]
Identifier: 83593929
GI number: 83593929
Start: 3018627
End: 3019499
Strand: Direct
Name: efeU [H]
Synonym: Rru_A2597
Alternate gene names: 83593929
Gene position: 3018627-3019499 (Clockwise)
Preceding gene: 83593924
Following gene: 83593930
Centisome position: 69.35
GC content: 66.09
Gene sequence:
>873_bases GTGCTGGCGCCTTTTCTTATCATGTTGCGCGAGGGCATCGAAGCGGCCCTGCTGACGAGCATCATCGCCGGCTATCTCAA GCAGACCGGACGGGGGGCGTGGTTACCGGCGGTCTGGGTCGGCGTCTTGCTCGCCGTCGCCCTGTCGCTGTTCGCCGGAA CCCTCTTGCAGATGATGGCGGCCGAATTTCCCCAGAAGGCCCAGGAGCTGTTCGAAGCGATCGTCGGCCTTGTCGCCGTG ACCGTTCTGGTCTCGATGGTCTTCTGGATGCGCAAGGCCGCGCGCTCGATCCAGACCGACCTGCGGGGCGCGATCGACGC CGCCTTGAAGGAGCCGGCGGGCGAACCCGGGACAACCGCGCCGGTAAGCGCCGCGTGGCCGTTGATCGGCATGACCTTTT TCGCCGTCGGTCGCGAAGGCCTGGAATCGGTGTTTTTCCTGTTGGCGATTTTTCAGCAGAGCCCCGGCCCGCTGGCACCG ATCGGGGCGCTGCTTGGGCTGGTGGTCGCCGTGGGGCTTGGCGTGGCCCTTTATCGGGGCGGCATTCGCCTTGATCTGCG CCGCTTCTTCCGCTGGACGGGCGTGTTCATCCTGATCGTCGCCGCCGGCCTCGCCTCGGCCAGCCTGCGCAGCCTGCACG AAGCCGGTTTATGGAACCACCTCCAGGCGCGGGCTTACGATCTATCCGACACGCTACCGGTCTCGAGCGTGCTTGGCACC GTGCTTTCGGGCGTCTTCAATTACCAGGACGCCCCGGCGATCGGCGAAGCGATCGTCTATGGCCTCTTTCTCCTGACCAC GCTGATCGTGTTCCTCAAGCCCCCTCGGCCGGCGCCCCTGCGCCGCGCCGCGCCCGACTCGTTGAAAGGATGA
Upstream 100 bases:
>100_bases ACGGCCCGAGCGGGAACGGGAAAACACCGGGTTACCGGATTGACAGGCGTCAATTTCATATTGATAATTAATCTCATTCA TAACAATCCGGGGACCCGTG
Downstream 100 bases:
>100_bases CGATGTCCTCGCCCCAACAGCACGGCGACGGCGGGCCGCCGCCCCGGCTGATGATCTATGCCGTCATCGCCGCCGGAGCG CTCGCCGTGGCCGGTGGCGT
Product: iron permease FTR1
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLAPFLIMLREGIEAALLTSIIAGYLKQTGRGAWLPAVWVGVLLAVALSLFAGTLLQMMAAEFPQKAQELFEAIVGLVAV TVLVSMVFWMRKAARSIQTDLRGAIDAALKEPAGEPGTTAPVSAAWPLIGMTFFAVGREGLESVFFLLAIFQQSPGPLAP IGALLGLVVAVGLGVALYRGGIRLDLRRFFRWTGVFILIVAAGLASASLRSLHEAGLWNHLQARAYDLSDTLPVSSVLGT VLSGVFNYQDAPAIGEAIVYGLFLLTTLIVFLKPPRPAPLRRAAPDSLKG
Sequences:
>Translated_290_residues MLAPFLIMLREGIEAALLTSIIAGYLKQTGRGAWLPAVWVGVLLAVALSLFAGTLLQMMAAEFPQKAQELFEAIVGLVAV TVLVSMVFWMRKAARSIQTDLRGAIDAALKEPAGEPGTTAPVSAAWPLIGMTFFAVGREGLESVFFLLAIFQQSPGPLAP IGALLGLVVAVGLGVALYRGGIRLDLRRFFRWTGVFILIVAAGLASASLRSLHEAGLWNHLQARAYDLSDTLPVSSVLGT VLSGVFNYQDAPAIGEAIVYGLFLLTTLIVFLKPPRPAPLRRAAPDSLKG >Mature_290_residues MLAPFLIMLREGIEAALLTSIIAGYLKQTGRGAWLPAVWVGVLLAVALSLFAGTLLQMMAAEFPQKAQELFEAIVGLVAV TVLVSMVFWMRKAARSIQTDLRGAIDAALKEPAGEPGTTAPVSAAWPLIGMTFFAVGREGLESVFFLLAIFQQSPGPLAP IGALLGLVVAVGLGVALYRGGIRLDLRRFFRWTGVFILIVAAGLASASLRSLHEAGLWNHLQARAYDLSDTLPVSSVLGT VLSGVFNYQDAPAIGEAIVYGLFLLTTLIVFLKPPRPAPLRRAAPDSLKG
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 30836; Mature: 30836
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPFLIMLREGIEAALLTSIIAGYLKQTGRGAWLPAVWVGVLLAVALSLFAGTLLQMMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AEFPQKAQELFEAIVGLVAVTVLVSMVFWMRKAARSIQTDLRGAIDAALKEPAGEPGTTA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVSAAWPLIGMTFFAVGREGLESVFFLLAIFQQSPGPLAPIGALLGLVVAVGLGVALYRG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC GIRLDLRRFFRWTGVFILIVAAGLASASLRSLHEAGLWNHLQARAYDLSDTLPVSSVLGT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VLSGVFNYQDAPAIGEAIVYGLFLLTTLIVFLKPPRPAPLRRAAPDSLKG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLAPFLIMLREGIEAALLTSIIAGYLKQTGRGAWLPAVWVGVLLAVALSLFAGTLLQMMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AEFPQKAQELFEAIVGLVAVTVLVSMVFWMRKAARSIQTDLRGAIDAALKEPAGEPGTTA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVSAAWPLIGMTFFAVGREGLESVFFLLAIFQQSPGPLAPIGALLGLVVAVGLGVALYRG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC GIRLDLRRFFRWTGVFILIVAAGLASASLRSLHEAGLWNHLQARAYDLSDTLPVSSVLGT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VLSGVFNYQDAPAIGEAIVYGLFLLTTLIVFLKPPRPAPLRRAAPDSLKG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA