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The map label for this gene is aapJ [H]

Identifier: 83593850

GI number: 83593850

Start: 2923708

End: 2924829

Strand: Direct

Name: aapJ [H]

Synonym: Rru_A2515

Alternate gene names: 83593850

Gene position: 2923708-2924829 (Clockwise)

Preceding gene: 83593846

Following gene: 83593851

Centisome position: 67.17

GC content: 63.55

Gene sequence:

>1122_bases
ATGAGCCTTTCGCGTCCCTTGGGCCAAGACCCCGCGCCTTGGCCGGTCCCGCCGGCAAGCCGGCCCCCCTTTTGGTTTCA
AGGCCGATCGCCCCGCCCTGGTCTGGCCTTCGCCTTTGGCCTTGTCGCCGCCCTGACCCTGGCCGCGCCGGCGCTGGCCG
CCAATGGCGACACGTTGACCTCCATCCGCGACCGGGGCAGCGTGACCTGTGGCACCAATCCCATTCCCGGGTTCGGCTTT
CCCGACTCAGACGGCAATTGGCGGGGCTTTTTCATCGATTTTTGCCGGGCCCTGGCGGCGGCGACCCTTGGCGACCCGAC
CGCCTTCGAGGTCGTTCCCGTCGAGTCAAACAGCCGCTGGGAGGCCCTCAACAGCCATACCACCGATGTGAACGTCGATG
GCTCGACCTGGACGCTGAGCCGCGATACGGCGCTCGGCTTCGATTTCCCAGGGGTGCTGATCTACGATGGCCAACGGTTT
CTGGCCAAGCCCTCGGTGCCGGAGGGATCGGTGAAGGCGGCGGCCGGTTTGCGCGTGTGCATCATCATGGGCACGACGGC
GGAAGTGAACCTGCGCGATTTCCTTAAGAAAAACGATCTTGAGATGACGGTGATCGCCACCGAATCCGACGAGGGCGCCT
GGACCTCCTTCCTGAAAGGCCGCTGCGAGCTGTTCGTCAATGACGGCATCGGCCTCGCCCTGCGCAACGCCCTGCATATG
ACGCCACCGCGCGTCAACCACCTGATGACCGAAGCGATTTCCAAGGAGCCGCTCGGTCCGGTGGTCCGCGGCGATGATCA
TCAGTGGTTAGAAATCAACAGATGGGTTCTTAACGTGCTGATCGCGGCCGAAGAAGCCGGAATATCCTCGACAACCCTTG
TCGATCCGTCCCCCACCGCCGACTTGTCTTCCGAGGATCGCGTTTTTGTCGGGGGCCCGGAGGACAATGCCGCCGCCCTT
GGCCTGGAACCGGGATGGGCAAGACGGGTTATCGCCGCGGTCGGCAATTATGGTGAGGTGTTCGACCGCAATTTGGGAAA
AGGCTCGGAGATCGGCCTTGACCGGGGCGTGAACGCGTTGTGGTCCGAAGGCGGGTTGATGATTTCACCGCCGCTGCAAT
AG

Upstream 100 bases:

>100_bases
CCCATCCTTCGCAGCAAGGCCGATCGCGACGAAAGAAGATTTTGCCCCTATCCTGATTTGTGCGTAGATGACCAGGATCG
CTTGCTATGGGGGGGAGCCT

Downstream 100 bases:

>100_bases
CCGCGGCCAGACACGATGAGGGACCTTTGGCAGGACTGAGGTTTGGCGTCCGCTCCCGTCTGGTCCTCGCCTTTTCGGCG
ATGGCGGCAATGACCCTGGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSLSRPLGQDPAPWPVPPASRPPFWFQGRSPRPGLAFAFGLVAALTLAAPALAANGDTLTSIRDRGSVTCGTNPIPGFGF
PDSDGNWRGFFIDFCRALAAATLGDPTAFEVVPVESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRF
LAKPSVPEGSVKAAAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLALRNALHM
TPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTLVDPSPTADLSSEDRVFVGGPEDNAAAL
GLEPGWARRVIAAVGNYGEVFDRNLGKGSEIGLDRGVNALWSEGGLMISPPLQ

Sequences:

>Translated_373_residues
MSLSRPLGQDPAPWPVPPASRPPFWFQGRSPRPGLAFAFGLVAALTLAAPALAANGDTLTSIRDRGSVTCGTNPIPGFGF
PDSDGNWRGFFIDFCRALAAATLGDPTAFEVVPVESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRF
LAKPSVPEGSVKAAAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLALRNALHM
TPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTLVDPSPTADLSSEDRVFVGGPEDNAAAL
GLEPGWARRVIAAVGNYGEVFDRNLGKGSEIGLDRGVNALWSEGGLMISPPLQ
>Mature_372_residues
SLSRPLGQDPAPWPVPPASRPPFWFQGRSPRPGLAFAFGLVAALTLAAPALAANGDTLTSIRDRGSVTCGTNPIPGFGFP
DSDGNWRGFFIDFCRALAAATLGDPTAFEVVPVESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFL
AKPSVPEGSVKAAAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLALRNALHMT
PPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTLVDPSPTADLSSEDRVFVGGPEDNAAALG
LEPGWARRVIAAVGNYGEVFDRNLGKGSEIGLDRGVNALWSEGGLMISPPLQ

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 39850; Mature: 39719

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSRPLGQDPAPWPVPPASRPPFWFQGRSPRPGLAFAFGLVAALTLAAPALAANGDTLT
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
SIRDRGSVTCGTNPIPGFGFPDSDGNWRGFFIDFCRALAAATLGDPTAFEVVPVESNSRW
HHHCCCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
EALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFLAKPSVPEGSVKAAAGLRVC
HHHCCCCCEEEECCCEEEEECCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEE
IIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLALRNALHM
EEECCCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHCCEEEEEEECCCCHHHHHHHCC
TPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTLVDPSPTA
CCHHHHHHHHHHHCCCCCCCCEECCCCCEEHHHHHHEEHHEEHHCCCCCCEEEECCCCCC
DLSSEDRVFVGGPEDNAAALGLEPGWARRVIAAVGNYGEVFDRNLGKGSEIGLDRGVNAL
CCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHCCHHH
WSEGGLMISPPLQ
HCCCCEEECCCCC
>Mature Secondary Structure 
SLSRPLGQDPAPWPVPPASRPPFWFQGRSPRPGLAFAFGLVAALTLAAPALAANGDTLT
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
SIRDRGSVTCGTNPIPGFGFPDSDGNWRGFFIDFCRALAAATLGDPTAFEVVPVESNSRW
HHHCCCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
EALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFLAKPSVPEGSVKAAAGLRVC
HHHCCCCCEEEECCCEEEEECCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEE
IIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGRCELFVNDGIGLALRNALHM
EEECCCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHCCEEEEEEECCCCHHHHHHHCC
TPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVLIAAEEAGISSTTLVDPSPTA
CCHHHHHHHHHHHCCCCCCCCEECCCCCEEHHHHHHEEHHEEHHCCCCCCEEEECCCCCC
DLSSEDRVFVGGPEDNAAALGLEPGWARRVIAAVGNYGEVFDRNLGKGSEIGLDRGVNAL
CCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHCCHHH
WSEGGLMISPPLQ
HCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]