Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
---|---|
Accession | NC_007643 |
Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593836
Identifier: 83593836
GI number: 83593836
Start: 2908139
End: 2908660
Strand: Direct
Name: 83593836
Synonym: Rru_A2501
Alternate gene names: NA
Gene position: 2908139-2908660 (Clockwise)
Preceding gene: 83593835
Following gene: 83593837
Centisome position: 66.81
GC content: 66.67
Gene sequence:
>522_bases ATGTTGCTTCGTAAAGAGACCGCGGAAAGCCAGCGCGCCAGCGCCAGTTGGTCGGCGGCGACCCAGCGCACGTTCCTGGT TGTCGTCGACAACTCGGCCGAGATGCGGGTGGCGTTACGCTACGCCAGCCGCCGGGCGCAGAACACCGGCGGCCGGGTGG CGCTGATGATCGCCATCGAACAGACCGAATTCGAGCAATGGATGTTCGTTGGCAATCTGATGCGCGAAGAGGCCCGCGAG GGCGCCGAGCAAAGCTTGCAACGCCATGCCGCCGCCGTCGGCGCCGTAAGCGGCGAAAGGCCGTCGCTGTTCGTGCGCGA AGGCGACCGCATCCGCGAAGTGTTCAAGCTGGTCAACGAAGAGCCGTCGATTTCGGTGCTGGTGCTTGGCGTCGGCGCCG ATCCCAATAATCCCGGCCCGCTGGTCCGCGAACTGACCGGCCGTCAGGCCGGCAAGCTGCGGGTTCCCGTGACCCTGGTG CCCGGTGGCCTGAGCGATGCCGAGATCGACGCCCTGGCCTGA
Upstream 100 bases:
>100_bases CGCCGCAGCAACCAAGACCCGTTGCCATCCCTCCCAAGGGTCGCCATCATTAGTTCTATAAGAAGGCCCCCTAAAGGGGA CCCGATGGGAGAGACCGGCG
Downstream 100 bases:
>100_bases ACCGGGCCCCGCCGCTTGGCGAGAATGCGACAAGAAAACACGGACGATCCAACGTCCCCCCTTGTCGGGCTCTGGCCGCG ATCCGATTATTTATCCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein; Uspa Domain-Containing Protein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MLLRKETAESQRASASWSAATQRTFLVVVDNSAEMRVALRYASRRAQNTGGRVALMIAIEQTEFEQWMFVGNLMREEARE GAEQSLQRHAAAVGAVSGERPSLFVREGDRIREVFKLVNEEPSISVLVLGVGADPNNPGPLVRELTGRQAGKLRVPVTLV PGGLSDAEIDALA
Sequences:
>Translated_173_residues MLLRKETAESQRASASWSAATQRTFLVVVDNSAEMRVALRYASRRAQNTGGRVALMIAIEQTEFEQWMFVGNLMREEARE GAEQSLQRHAAAVGAVSGERPSLFVREGDRIREVFKLVNEEPSISVLVLGVGADPNNPGPLVRELTGRQAGKLRVPVTLV PGGLSDAEIDALA >Mature_173_residues MLLRKETAESQRASASWSAATQRTFLVVVDNSAEMRVALRYASRRAQNTGGRVALMIAIEQTEFEQWMFVGNLMREEARE GAEQSLQRHAAAVGAVSGERPSLFVREGDRIREVFKLVNEEPSISVLVLGVGADPNNPGPLVRELTGRQAGKLRVPVTLV PGGLSDAEIDALA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18828; Mature: 18828
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRKETAESQRASASWSAATQRTFLVVVDNSAEMRVALRYASRRAQNTGGRVALMIAIE CCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEE QTEFEQWMFVGNLMREEAREGAEQSLQRHAAAVGAVSGERPSLFVREGDRIREVFKLVNE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCC EPSISVLVLGVGADPNNPGPLVRELTGRQAGKLRVPVTLVPGGLSDAEIDALA CCCEEEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MLLRKETAESQRASASWSAATQRTFLVVVDNSAEMRVALRYASRRAQNTGGRVALMIAIE CCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEE QTEFEQWMFVGNLMREEAREGAEQSLQRHAAAVGAVSGERPSLFVREGDRIREVFKLVNE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCC EPSISVLVLGVGADPNNPGPLVRELTGRQAGKLRVPVTLVPGGLSDAEIDALA CCCEEEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA