Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is ybaN [H]
Identifier: 83593837
GI number: 83593837
Start: 2908807
End: 2909265
Strand: Direct
Name: ybaN [H]
Synonym: Rru_A2502
Alternate gene names: 83593837
Gene position: 2908807-2909265 (Clockwise)
Preceding gene: 83593836
Following gene: 83593839
Centisome position: 66.83
GC content: 68.41
Gene sequence:
>459_bases GTGACCAACGGCAAGCGGATCGCCCTGCTGGCATTGGGCCATGCCTGCGTGGGTTTGGGGGTGATCGGCGCCTTTCTCCC CGTGGTGCCGACCACGCCGTTTCTTCTGCTCGCCACCTGGGCCTATGGACAATCAAGCCCGCGCCTGCGCGCTTGGCTAT GGACCCATCCGCGCTATGGCAAGGCCATTCGCGGCTGGCATGAGCACGGGCTGATCAGCCGGCGGGCCAAGGTGCTCTCG ATCGGGGCGATGGCCTGTTCGGTCGGCATCACGGCGTGGCTGATCGGCACTATGACCGTTGTGGCGATCCAGGCCGGGGT GCTGGTGCTGGTGGCGGCCTTCATCGCCAGCCGCCCCGAACACCCGCCCGCCGAACACCCGCCCGCCGAAAGCATGATGA CCAAGCCTCCGCCAGCCTCCCCGGCCGCTTCCCCACTGATCACGCCGCCGGAGCGCTGA
Upstream 100 bases:
>100_bases ATCCAACGTCCCCCCTTGTCGGGCTCTGGCCGCGATCCGATTATTTATCCCTCGCCGCTGGTGAAACCCCACTGCGGCCG CGAACAAGGGATGAGCAAGC
Downstream 100 bases:
>100_bases TCCCGAAATCCCGCGCCCAGCGCAGGCCGGCCTCGGTGCCGGCGCGCGGGGTGTACTCGCAGCCGACCCAACCGGGGAAG CCGTGGGCATCGAGCAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTNGKRIALLALGHACVGLGVIGAFLPVVPTTPFLLLATWAYGQSSPRLRAWLWTHPRYGKAIRGWHEHGLISRRAKVLS IGAMACSVGITAWLIGTMTVVAIQAGVLVLVAAFIASRPEHPPAEHPPAESMMTKPPPASPAASPLITPPER
Sequences:
>Translated_152_residues MTNGKRIALLALGHACVGLGVIGAFLPVVPTTPFLLLATWAYGQSSPRLRAWLWTHPRYGKAIRGWHEHGLISRRAKVLS IGAMACSVGITAWLIGTMTVVAIQAGVLVLVAAFIASRPEHPPAEHPPAESMMTKPPPASPAASPLITPPER >Mature_151_residues TNGKRIALLALGHACVGLGVIGAFLPVVPTTPFLLLATWAYGQSSPRLRAWLWTHPRYGKAIRGWHEHGLISRRAKVLSI GAMACSVGITAWLIGTMTVVAIQAGVLVLVAAFIASRPEHPPAEHPPAESMMTKPPPASPAASPLITPPER
Specific function: Unknown
COG id: COG2832
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786674, Length=91, Percent_Identity=39.5604395604396, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007401 [H]
Pfam domain/function: PF04304 DUF454 [H]
EC number: NA
Molecular weight: Translated: 16120; Mature: 15989
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNGKRIALLALGHACVGLGVIGAFLPVVPTTPFLLLATWAYGQSSPRLRAWLWTHPRYG CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCC KAIRGWHEHGLISRRAKVLSIGAMACSVGITAWLIGTMTVVAIQAGVLVLVAAFIASRPE HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPPAEHPPAESMMTKPPPASPAASPLITPPER CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNGKRIALLALGHACVGLGVIGAFLPVVPTTPFLLLATWAYGQSSPRLRAWLWTHPRYG CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCC KAIRGWHEHGLISRRAKVLSIGAMACSVGITAWLIGTMTVVAIQAGVLVLVAAFIASRPE HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPPAEHPPAESMMTKPPPASPAASPLITPPER CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]