Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is pyk [H]
Identifier: 83593800
GI number: 83593800
Start: 2864811
End: 2866247
Strand: Direct
Name: pyk [H]
Synonym: Rru_A2465
Alternate gene names: 83593800
Gene position: 2864811-2866247 (Clockwise)
Preceding gene: 83593799
Following gene: 83593801
Centisome position: 65.81
GC content: 65.55
Gene sequence:
>1437_bases ATGAAACGAAACCGTTGCGCCAAGATTCTGGCCACCCTCGGCCCGGCCACGTCCTCGGAAAGCACCCTCGAGACCCTGGT TCGGGCCGGTGCGGACATGGTTCGCCTGAATTTCAGCCACGGCGCCCACGAAGAACACCGGCGCCGCTACGACGTGGTCC GCGCCGTTGAAAACAAGCTCGGCCGACCGATCGGCATCCTGATGGACCTCCAGGGTCCGAAGCTGCGGGTCGGTGATTTC GTCGGCGGCAAGGTCAAGCTGGAAACCGGCGCCACCTTCCGTCTCGACATGGAAAAGGACCTGGGCACCATCCAGCGTGT CCGCCTGCCCCACCCCGAAATCTTCGCCGCCATCGGCGAAGGCACCGATCTGTTGCTTGACGACGGCAAACTGCGGCTGC GGGTGGAAACCTTCGGCGCCGATTACGCCATTACCCGGGTGATCACCGGCGGCGTGCTGTCGGACCACAAGGGCCTCAAT GTGCCCAATGCCGTTCTGCCGATCTCGGCGCTGACCGAAAAGGACCGCCGCGACCTGCAGTTCGGCCTCGACCTCGGGGT CGATTGGGTTGGCCTCAGCTTCGTGCAGCGCCCCGAGGACGTGGCCGAGGCGCGCAAGCTGATCGGCGGTCGCGCCGCCA TCATCAGCAAGATCGAAAAGCCCGCCGCCCTCGACCATCTCACCCATATCATCGAATTGTCCGACGCCCTGATGGTCGCC CGCGGCGATCTGGGCGTGGAAGTGCCGCCCGAGCGCGTGCCGATCTTGCAAAAGCGCATCCTGGCCGCCTGCCACCTCGC CGGCAAGCCGGTGGTGGTCGCCACCCAGATGCTTGAAAGCATGATCAACGCCCCGACGCCGACCCGCGCCGAGGCCTCGG ACGTGGCGACGGCCATCTATGATGGCGCCGATGCGGTGATGCTGTCGGCGGAAACCGCCGTCGGCCAGTATCCGGTCGAA GCCGTGGCGATGATGGACAAGATCATCCAGCAGGTGGAAACCGACGAGCATTATCAGTATCTGCGCAATGCCCGCCGCGA AAGCCCCGAGGGCACGGCCGCCGACGCCATCAGCGCCGCCGCCAGTCAGGTGGCCGAGACCATCAAGGCCGCCGCCATCG TCACCTATACCTCCTCGGGATCGACGACGCTGCGCGCCGCCCGCCAGCGCCCCGGCGTGCCGATCCTTTGCCTGACCACC AACCCCCGCATCGCCCGACGGATGGCGATGGTCTGGGGCGTCCATTCGGTGCTCGACAAGGACATCTCCAACTTCCAGGA AATGGTCGAACTGGCGGTCAAGGCCGCCTATCGCGAAGGCTTCGCCAATATCGGCGAGCGCATCGTGATGACGGCGGGCG TGCCCTTTGGCACCCCGGGCACGACCAATGTTCTGCGAATCGCCTGGGTCGAAGGCGATGACAGCTGGGCGGAATAA
Upstream 100 bases:
>100_bases TGATGTTAAAAAATACAACGGTGGCCCCATGCCGCCACATCCCCCCTCCCTAGCTCGGTGACGCGCCCCGTCACAGGGCC CAAGCCCGTGTGAACGCTCC
Downstream 100 bases:
>100_bases GCCCGCCTGTTTACCGACTCACTCCCGGGCGGGCGATGCCCTCGCCCGTCCGGGACCATGACCCGCGCGAGGCCCCCCTC GCGCCCAGTCCGGGACTTTT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MKRNRCAKILATLGPATSSESTLETLVRAGADMVRLNFSHGAHEEHRRRYDVVRAVENKLGRPIGILMDLQGPKLRVGDF VGGKVKLETGATFRLDMEKDLGTIQRVRLPHPEIFAAIGEGTDLLLDDGKLRLRVETFGADYAITRVITGGVLSDHKGLN VPNAVLPISALTEKDRRDLQFGLDLGVDWVGLSFVQRPEDVAEARKLIGGRAAIISKIEKPAALDHLTHIIELSDALMVA RGDLGVEVPPERVPILQKRILAACHLAGKPVVVATQMLESMINAPTPTRAEASDVATAIYDGADAVMLSAETAVGQYPVE AVAMMDKIIQQVETDEHYQYLRNARRESPEGTAADAISAAASQVAETIKAAAIVTYTSSGSTTLRAARQRPGVPILCLTT NPRIARRMAMVWGVHSVLDKDISNFQEMVELAVKAAYREGFANIGERIVMTAGVPFGTPGTTNVLRIAWVEGDDSWAE
Sequences:
>Translated_478_residues MKRNRCAKILATLGPATSSESTLETLVRAGADMVRLNFSHGAHEEHRRRYDVVRAVENKLGRPIGILMDLQGPKLRVGDF VGGKVKLETGATFRLDMEKDLGTIQRVRLPHPEIFAAIGEGTDLLLDDGKLRLRVETFGADYAITRVITGGVLSDHKGLN VPNAVLPISALTEKDRRDLQFGLDLGVDWVGLSFVQRPEDVAEARKLIGGRAAIISKIEKPAALDHLTHIIELSDALMVA RGDLGVEVPPERVPILQKRILAACHLAGKPVVVATQMLESMINAPTPTRAEASDVATAIYDGADAVMLSAETAVGQYPVE AVAMMDKIIQQVETDEHYQYLRNARRESPEGTAADAISAAASQVAETIKAAAIVTYTSSGSTTLRAARQRPGVPILCLTT NPRIARRMAMVWGVHSVLDKDISNFQEMVELAVKAAYREGFANIGERIVMTAGVPFGTPGTTNVLRIAWVEGDDSWAE >Mature_478_residues MKRNRCAKILATLGPATSSESTLETLVRAGADMVRLNFSHGAHEEHRRRYDVVRAVENKLGRPIGILMDLQGPKLRVGDF VGGKVKLETGATFRLDMEKDLGTIQRVRLPHPEIFAAIGEGTDLLLDDGKLRLRVETFGADYAITRVITGGVLSDHKGLN VPNAVLPISALTEKDRRDLQFGLDLGVDWVGLSFVQRPEDVAEARKLIGGRAAIISKIEKPAALDHLTHIIELSDALMVA RGDLGVEVPPERVPILQKRILAACHLAGKPVVVATQMLESMINAPTPTRAEASDVATAIYDGADAVMLSAETAVGQYPVE AVAMMDKIIQQVETDEHYQYLRNARRESPEGTAADAISAAASQVAETIKAAAIVTYTSSGSTTLRAARQRPGVPILCLTT NPRIARRMAMVWGVHSVLDKDISNFQEMVELAVKAAYREGFANIGERIVMTAGVPFGTPGTTNVLRIAWVEGDDSWAE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=491, Percent_Identity=39.3075356415479, Blast_Score=315, Evalue=5e-86, Organism=Homo sapiens, GI33286422, Length=491, Percent_Identity=38.4928716904277, Blast_Score=312, Evalue=5e-85, Organism=Homo sapiens, GI33286420, Length=491, Percent_Identity=38.4928716904277, Blast_Score=312, Evalue=5e-85, Organism=Homo sapiens, GI10835121, Length=486, Percent_Identity=38.2716049382716, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI32967597, Length=486, Percent_Identity=38.2716049382716, Blast_Score=309, Evalue=3e-84, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=39.1003460207612, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=39.1003460207612, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI310128736, Length=232, Percent_Identity=37.5, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI310128734, Length=232, Percent_Identity=37.5, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI310128738, Length=211, Percent_Identity=36.9668246445498, Blast_Score=128, Evalue=1e-29, Organism=Escherichia coli, GI1787965, Length=465, Percent_Identity=38.9247311827957, Blast_Score=307, Evalue=8e-85, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=40.625, Blast_Score=298, Evalue=7e-82, Organism=Caenorhabditis elegans, GI17544584, Length=484, Percent_Identity=35.9504132231405, Blast_Score=306, Evalue=2e-83, Organism=Caenorhabditis elegans, GI71984413, Length=489, Percent_Identity=36.8098159509202, Blast_Score=279, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71984406, Length=492, Percent_Identity=36.7886178861789, Blast_Score=279, Evalue=3e-75, Organism=Caenorhabditis elegans, GI17506829, Length=489, Percent_Identity=36.8098159509202, Blast_Score=279, Evalue=3e-75, Organism=Caenorhabditis elegans, GI17506831, Length=488, Percent_Identity=36.8852459016393, Blast_Score=278, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6319279, Length=485, Percent_Identity=35.6701030927835, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6324923, Length=486, Percent_Identity=36.0082304526749, Blast_Score=256, Evalue=4e-69, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=37.9591836734694, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=37.9591836734694, Blast_Score=298, Evalue=4e-81, Organism=Drosophila melanogaster, GI24648966, Length=430, Percent_Identity=38.1395348837209, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI24581235, Length=491, Percent_Identity=32.3828920570265, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24646914, Length=263, Percent_Identity=41.06463878327, Blast_Score=188, Evalue=6e-48,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51760; Mature: 51760
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNRCAKILATLGPATSSESTLETLVRAGADMVRLNFSHGAHEEHRRRYDVVRAVENKL CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC GRPIGILMDLQGPKLRVGDFVGGKVKLETGATFRLDMEKDLGTIQRVRLPHPEIFAAIGE CCCEEEEEECCCCCEEECCCCCCEEEEECCCEEEEECHHCCCHHHHHCCCCHHHHHHHCC GTDLLLDDGKLRLRVETFGADYAITRVITGGVLSDHKGLNVPNAVLPISALTEKDRRDLQ CCEEEEECCEEEEEEEECCCCCEEHHHHHCCCCCCCCCCCCCCHHCCHHHHHHCHHHHHH FGLDLGVDWVGLSFVQRPEDVAEARKLIGGRAAIISKIEKPAALDHLTHIIELSDALMVA HHHCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE RGDLGVEVPPERVPILQKRILAACHLAGKPVVVATQMLESMINAPTPTRAEASDVATAIY ECCCCCCCCCHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH DGADAVMLSAETAVGQYPVEAVAMMDKIIQQVETDEHYQYLRNARRESPEGTAADAISAA CCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHH ASQVAETIKAAAIVTYTSSGSTTLRAARQRPGVPILCLTTNPRIARRMAMVWGVHSVLDK HHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH DISNFQEMVELAVKAAYREGFANIGERIVMTAGVPFGTPGTTNVLRIAWVEGDDSWAE HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MKRNRCAKILATLGPATSSESTLETLVRAGADMVRLNFSHGAHEEHRRRYDVVRAVENKL CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC GRPIGILMDLQGPKLRVGDFVGGKVKLETGATFRLDMEKDLGTIQRVRLPHPEIFAAIGE CCCEEEEEECCCCCEEECCCCCCEEEEECCCEEEEECHHCCCHHHHHCCCCHHHHHHHCC GTDLLLDDGKLRLRVETFGADYAITRVITGGVLSDHKGLNVPNAVLPISALTEKDRRDLQ CCEEEEECCEEEEEEEECCCCCEEHHHHHCCCCCCCCCCCCCCHHCCHHHHHHCHHHHHH FGLDLGVDWVGLSFVQRPEDVAEARKLIGGRAAIISKIEKPAALDHLTHIIELSDALMVA HHHCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE RGDLGVEVPPERVPILQKRILAACHLAGKPVVVATQMLESMINAPTPTRAEASDVATAIY ECCCCCCCCCHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH DGADAVMLSAETAVGQYPVEAVAMMDKIIQQVETDEHYQYLRNARRESPEGTAADAISAA CCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHH ASQVAETIKAAAIVTYTSSGSTTLRAARQRPGVPILCLTTNPRIARRMAMVWGVHSVLDK HHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH DISNFQEMVELAVKAAYREGFANIGERIVMTAGVPFGTPGTTNVLRIAWVEGDDSWAE HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA