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The map label for this gene is yaiC [C]

Identifier: 83593786

GI number: 83593786

Start: 2849230

End: 2850093

Strand: Direct

Name: yaiC [C]

Synonym: Rru_A2451

Alternate gene names: 83593786

Gene position: 2849230-2850093 (Clockwise)

Preceding gene: 83593785

Following gene: 83593787

Centisome position: 65.46

GC content: 64.12

Gene sequence:

>864_bases
ATGACCCCGATTACCAAAATCGTCGCGCTCTTTCTGACCAGCGCCATCCTGTGGATCCTGATCACCGTCCCGCTGTGGGC
AACAGCCTTCCCCCGCTCCCCTCTGGTGATCATCGGCATCGCCCCTGGGCTGATCATCGCCGTGGCGGCGGCGATCACCA
TCGGGTGGGTCCTCGCAAAGACCGACGCCGCCCATAACAAGATCGTCGCCGCGTTGGAGGAGCGCGCCCAGCGCGACCCC
TTGACCGGCATGCTGAACAAAGAGGCCTTCATAACCCATCTGGAGGTCGCCTTCGCCCGGGCGCAGCGCTCTGAAAAGCC
CTTTAGGGTCCTCTTCGTTGATGTCGACCGCTTCAAGGATATCAACGACTTCCATGGTCATCGCTTTGGCGACGCCGCCC
TGGTGGCGATCGCCGCCCGCTTGCGCAGCGTCTTGCGCAGCGCCGATATCGCCGCCCGCTACGGCGGGGACGAGTTCACG
ATCATCGTCGAACCCGATGAAGGCGACACTCTGGATGCCATCACCGCGCGCATTTCCCGCGCCTTCGAGACCCCCGTCGA
CATCGACCATAATGGCTTGCGCGAATCTTTCCCGGTGACCGTGAGCACTGGCTTCTCGCGCTACTCAGACGAGACGACCA
GCGTCGACGCCTTGATCGAAGAAGCCGACGAGCGGATGTACGACGCCAAGAAGCGCAACCGCAAAACCGTGAGCCATCCC
GGCGCGGCAGGCATGACCCCCAGAGCCTTCCATGGCGGCCGCCCCGTGAGGTCCGCCCTGATGATGGCGTCCCTCTTGCG
CCAGCCTTGCCCGGGCGCGGCCACCCGCCCGCCAAGTTATAGCGCCCTGGACTGGTCGTTGTAA

Upstream 100 bases:

>100_bases
CCCGTCAGAATCTGGGGGTACCCCCGTCTAGGATCATCGGTAAGGGAGGTCGACCACGAAAGCGGCCTTCCCCTCGTCCA
GTCACAGCCGAGGTGCCCGC

Downstream 100 bases:

>100_bases
GCACACCCCTTTTGCGAGCACGGCCCCGAAAAACCCACTCACCACGCTTGATTGCAGCGGCAACTTGGCTCACCAATAGG
ACTTGAGTAAGGTAGGGGGA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTPITKIVALFLTSAILWILITVPLWATAFPRSPLVIIGIAPGLIIAVAAAITIGWVLAKTDAAHNKIVAALEERAQRDP
LTGMLNKEAFITHLEVAFARAQRSEKPFRVLFVDVDRFKDINDFHGHRFGDAALVAIAARLRSVLRSADIAARYGGDEFT
IIVEPDEGDTLDAITARISRAFETPVDIDHNGLRESFPVTVSTGFSRYSDETTSVDALIEEADERMYDAKKRNRKTVSHP
GAAGMTPRAFHGGRPVRSALMMASLLRQPCPGAATRPPSYSALDWSL

Sequences:

>Translated_287_residues
MTPITKIVALFLTSAILWILITVPLWATAFPRSPLVIIGIAPGLIIAVAAAITIGWVLAKTDAAHNKIVAALEERAQRDP
LTGMLNKEAFITHLEVAFARAQRSEKPFRVLFVDVDRFKDINDFHGHRFGDAALVAIAARLRSVLRSADIAARYGGDEFT
IIVEPDEGDTLDAITARISRAFETPVDIDHNGLRESFPVTVSTGFSRYSDETTSVDALIEEADERMYDAKKRNRKTVSHP
GAAGMTPRAFHGGRPVRSALMMASLLRQPCPGAATRPPSYSALDWSL
>Mature_286_residues
TPITKIVALFLTSAILWILITVPLWATAFPRSPLVIIGIAPGLIIAVAAAITIGWVLAKTDAAHNKIVAALEERAQRDPL
TGMLNKEAFITHLEVAFARAQRSEKPFRVLFVDVDRFKDINDFHGHRFGDAALVAIAARLRSVLRSADIAARYGGDEFTI
IVEPDEGDTLDAITARISRAFETPVDIDHNGLRESFPVTVSTGFSRYSDETTSVDALIEEADERMYDAKKRNRKTVSHPG
AAGMTPRAFHGGRPVRSALMMASLLRQPCPGAATRPPSYSALDWSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=201, Percent_Identity=31.3432835820896, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87081977, Length=173, Percent_Identity=31.7919075144509, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1788381, Length=203, Percent_Identity=31.5270935960591, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI145693134, Length=161, Percent_Identity=36.6459627329193, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87081881, Length=173, Percent_Identity=32.3699421965318, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788956, Length=164, Percent_Identity=34.7560975609756, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787262, Length=164, Percent_Identity=29.8780487804878, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787541, Length=159, Percent_Identity=31.4465408805031, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87082007, Length=205, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787816, Length=182, Percent_Identity=31.3186813186813, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787802, Length=185, Percent_Identity=27.5675675675676, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081974, Length=211, Percent_Identity=26.0663507109005, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788085, Length=167, Percent_Identity=28.1437125748503, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787056, Length=177, Percent_Identity=30.5084745762712, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 31360; Mature: 31229

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPITKIVALFLTSAILWILITVPLWATAFPRSPLVIIGIAPGLIIAVAAAITIGWVLAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
TDAAHNKIVAALEERAQRDPLTGMLNKEAFITHLEVAFARAQRSEKPFRVLFVDVDRFKD
CCHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCC
INDFHGHRFGDAALVAIAARLRSVLRSADIAARYGGDEFTIIVEPDEGDTLDAITARISR
CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
AFETPVDIDHNGLRESFPVTVSTGFSRYSDETTSVDALIEEADERMYDAKKRNRKTVSHP
HHCCCCCCCCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GAAGMTPRAFHGGRPVRSALMMASLLRQPCPGAATRPPSYSALDWSL
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPITKIVALFLTSAILWILITVPLWATAFPRSPLVIIGIAPGLIIAVAAAITIGWVLAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
TDAAHNKIVAALEERAQRDPLTGMLNKEAFITHLEVAFARAQRSEKPFRVLFVDVDRFKD
CCHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCC
INDFHGHRFGDAALVAIAARLRSVLRSADIAARYGGDEFTIIVEPDEGDTLDAITARISR
CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
AFETPVDIDHNGLRESFPVTVSTGFSRYSDETTSVDALIEEADERMYDAKKRNRKTVSHP
HHCCCCCCCCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GAAGMTPRAFHGGRPVRSALMMASLLRQPCPGAATRPPSYSALDWSL
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]