Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593787
Identifier: 83593787
GI number: 83593787
Start: 2850270
End: 2851226
Strand: Direct
Name: 83593787
Synonym: Rru_A2452
Alternate gene names: NA
Gene position: 2850270-2851226 (Clockwise)
Preceding gene: 83593786
Following gene: 83593788
Centisome position: 65.48
GC content: 56.32
Gene sequence:
>957_bases ATGGCTTGTTCCCGGGGAATCTCTCGAGAAACGCTTAAGAACGAGCTTGAATGTTCAGAACGAACCGTTGACAGAATAGT TGACGATATCAATAACGCTCTCAGCGCCGATCTGGAAATTGTGAAAGCACCAAATAATAACAATGAAATCTGTTATCAGC TTGTTTCTCATAAAGAAGAAAATGTCCCTGGCTTTTCCTTCGAGGAAGTCCGCTATCTAGCGACGTGCCGCGATCTCGCC GCGCCTTATCTTCCCGAAGCCGTGATCGGCCGCATCAACCGCAGCCTAGTCAATCTGGCGCTCCACCTGGAAGAAGGCCA GCGCCGCTCGGTTTCGGGCGCGCCGATCACCTTTGCCAACAAGGGATATATCGATTACGGCCCCCATGCCGAGACCATCA AAACCCTCAATGAGGCGATTGCGAACCGTCGTGTTTGCAGCTTGTGCTATCTGCCGATGAACGAGCGCACCGCCAAATCC TACCGCTACGCGCCCGGTCGGATCGTGGCCATGAACGGGGTGTTTTATGTGCAGGGCCACTACCTAGACGAGGGGTCGCT GTTACCGGGCCACTTCATAACCTTCTTGCTGCACAGGATCACCCAAATCACCCCGGGCGAGGAATACTTCCACTTCAACG CTTTTGAGGACACCTCCCGCGCCTTCGGCCTGAAATGGCACGAACCCATGCGCCGACAGATCCATGTGGCCGCCGACGCC GCCGATTATGTCCGCGACCGCATCTGGAGCGCCGATCAGACCATCGAAGAACAAGACGACGGCGGCATCATCCTCAGCGT CACCACGACAAGCGAAAAAGAGCTTCAGGCCTGGGTTTGGAGCTTCGGCGGATTGGCGGAGATTATTACCCCATCCTCGA ACGAGGAAAGCCAGGGACAAGACACGACCGCCTCCCCCGCGCCTTTAGCGGCGGACCCCCGCGTTCTCCAGGACTGA
Upstream 100 bases:
>100_bases TAGGACTTGAGTAAGGTAGGGGGATCCAACGACGATGTCAGAGAAAATCAATTCCGACGCCCGCCCGCGGGAACAAGCCA TCAAGGTGTTTCGTCGCTTG
Downstream 100 bases:
>100_bases GCAGCACAAGAATTCCCCCAAGGACGCCAATCTTCCCTCACCCCTTCCCCTCCGCCTTCGGGCGGCGGGGAATGGGGGAG GCGATGTTGGCGGTTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Type; Helix-Turn-Helix Transcriptional Regulator
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MACSRGISRETLKNELECSERTVDRIVDDINNALSADLEIVKAPNNNNEICYQLVSHKEENVPGFSFEEVRYLATCRDLA APYLPEAVIGRINRSLVNLALHLEEGQRRSVSGAPITFANKGYIDYGPHAETIKTLNEAIANRRVCSLCYLPMNERTAKS YRYAPGRIVAMNGVFYVQGHYLDEGSLLPGHFITFLLHRITQITPGEEYFHFNAFEDTSRAFGLKWHEPMRRQIHVAADA ADYVRDRIWSADQTIEEQDDGGIILSVTTTSEKELQAWVWSFGGLAEIITPSSNEESQGQDTTASPAPLAADPRVLQD
Sequences:
>Translated_318_residues MACSRGISRETLKNELECSERTVDRIVDDINNALSADLEIVKAPNNNNEICYQLVSHKEENVPGFSFEEVRYLATCRDLA APYLPEAVIGRINRSLVNLALHLEEGQRRSVSGAPITFANKGYIDYGPHAETIKTLNEAIANRRVCSLCYLPMNERTAKS YRYAPGRIVAMNGVFYVQGHYLDEGSLLPGHFITFLLHRITQITPGEEYFHFNAFEDTSRAFGLKWHEPMRRQIHVAADA ADYVRDRIWSADQTIEEQDDGGIILSVTTTSEKELQAWVWSFGGLAEIITPSSNEESQGQDTTASPAPLAADPRVLQD >Mature_317_residues ACSRGISRETLKNELECSERTVDRIVDDINNALSADLEIVKAPNNNNEICYQLVSHKEENVPGFSFEEVRYLATCRDLAA PYLPEAVIGRINRSLVNLALHLEEGQRRSVSGAPITFANKGYIDYGPHAETIKTLNEAIANRRVCSLCYLPMNERTAKSY RYAPGRIVAMNGVFYVQGHYLDEGSLLPGHFITFLLHRITQITPGEEYFHFNAFEDTSRAFGLKWHEPMRRQIHVAADAA DYVRDRIWSADQTIEEQDDGGIILSVTTTSEKELQAWVWSFGGLAEIITPSSNEESQGQDTTASPAPLAADPRVLQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35638; Mature: 35507
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACSRGISRETLKNELECSERTVDRIVDDINNALSADLEIVKAPNNNNEICYQLVSHKEE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCC NVPGFSFEEVRYLATCRDLAAPYLPEAVIGRINRSLVNLALHLEEGQRRSVSGAPITFAN CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECC KGYIDYGPHAETIKTLNEAIANRRVCSLCYLPMNERTAKSYRYAPGRIVAMNGVFYVQGH CCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCEEEEEEE YLDEGSLLPGHFITFLLHRITQITPGEEYFHFNAFEDTSRAFGLKWHEPMRRQIHVAADA EECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHEEEEHHH ADYVRDRIWSADQTIEEQDDGGIILSVTTTSEKELQAWVWSFGGLAEIITPSSNEESQGQ HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC DTTASPAPLAADPRVLQD CCCCCCCCCCCCCHHCCC >Mature Secondary Structure ACSRGISRETLKNELECSERTVDRIVDDINNALSADLEIVKAPNNNNEICYQLVSHKEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCC NVPGFSFEEVRYLATCRDLAAPYLPEAVIGRINRSLVNLALHLEEGQRRSVSGAPITFAN CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECC KGYIDYGPHAETIKTLNEAIANRRVCSLCYLPMNERTAKSYRYAPGRIVAMNGVFYVQGH CCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCEEEEEEE YLDEGSLLPGHFITFLLHRITQITPGEEYFHFNAFEDTSRAFGLKWHEPMRRQIHVAADA EECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHEEEEHHH ADYVRDRIWSADQTIEEQDDGGIILSVTTTSEKELQAWVWSFGGLAEIITPSSNEESQGQ HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC DTTASPAPLAADPRVLQD CCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA