Click here to switch to the map view.

The map label for this gene is yfgC [C]

Identifier: 83593785

GI number: 83593785

Start: 2848264

End: 2849058

Strand: Direct

Name: yfgC [C]

Synonym: Rru_A2450

Alternate gene names: 83593785

Gene position: 2848264-2849058 (Clockwise)

Preceding gene: 83593783

Following gene: 83593786

Centisome position: 65.43

GC content: 67.42

Gene sequence:

>795_bases
ATGGCCTTGCCGTCTCCGCCCCGCCTTTCCCGTATCGCCAGCCTGGGCGCGGTCCTGGCGCTTTGCGCCTGCGCCGCCAA
TCCAGTCACCGGTCGCCAGCAGTTGATCCTGGTCAGCGGCGCCCAGGGCGCGGAGATGGGAGCCCAAGCCTATCGGGACA
TCAAAAAGGAAAAGCCGGTTCTGCCGGCCGGCAACGCCTATACCCAGCGCATCCGCGCCATCACCGAGCGGTTGATCAAG
GCCAATGACCTGCCGGCCTATGACTGGGAGGTCAACGCCTTCGCCGATGACACGGCCAACGCCTTCGCCCTGCCCGGCGG
CAAGGTCGGCGTGAATACCGGCTTGGCCAAGGTGGCGCGCAGCGATGCCCAGCTTGCCGCGGTGATCGGCCACGAGATCG
CCCATGCGGTCTCGCGCCATGGCGAGGAACGGGTCTCCCAACAGATGGTGATCGGCACCGGCTTACAATTGGGCAGCGCG
GCCCTGGGCGCGGGAGCGGGCGGCAATGCCCAGGCCGTGGCCCTGATGGAACAGGCCGCGACCCTTGGCATCGTTTTGCC
CTATAGCCGCACCCACGAATCCGAAGCCGATGAGATCGGCCTTTTTTACATGGCGCGCGCCGGCTATGACCCGCGCGAGG
CGATTACCCTGTGGCAATCCATGGCGGCGCAGGGCGGCGAACGCCCGCCCGAATTCCTCTCGACCCACCCCAGCGAGGGC
AGCCGCATCGAAAACCTCCAGCGCCTGATGCCCCGGGCCCTGGACCTTTACCGCAAGGCCGGCGGCGAAGGCTGA

Upstream 100 bases:

>100_bases
TTTGGGGGTTTTCCGCGAGGTCTTGACCGCCGCCGGCCGCCTCCCCACCCTCAAGACCCGCCTTTTTCGCCCGCCAATGC
CGTTTGGGAGTGCATCGACC

Downstream 100 bases:

>100_bases
GGCGAGCCCAAGAATCCGCCCCTCCCACCCCCTTGTGCGAAGGTGAATTTTTTCTCTGAAAAAGGGTGCGACCCGTCAGA
ATCTGGGGGTACCCCCGTCT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MALPSPPRLSRIASLGAVLALCACAANPVTGRQQLILVSGAQGAEMGAQAYRDIKKEKPVLPAGNAYTQRIRAITERLIK
ANDLPAYDWEVNAFADDTANAFALPGGKVGVNTGLAKVARSDAQLAAVIGHEIAHAVSRHGEERVSQQMVIGTGLQLGSA
ALGAGAGGNAQAVALMEQAATLGIVLPYSRTHESEADEIGLFYMARAGYDPREAITLWQSMAAQGGERPPEFLSTHPSEG
SRIENLQRLMPRALDLYRKAGGEG

Sequences:

>Translated_264_residues
MALPSPPRLSRIASLGAVLALCACAANPVTGRQQLILVSGAQGAEMGAQAYRDIKKEKPVLPAGNAYTQRIRAITERLIK
ANDLPAYDWEVNAFADDTANAFALPGGKVGVNTGLAKVARSDAQLAAVIGHEIAHAVSRHGEERVSQQMVIGTGLQLGSA
ALGAGAGGNAQAVALMEQAATLGIVLPYSRTHESEADEIGLFYMARAGYDPREAITLWQSMAAQGGERPPEFLSTHPSEG
SRIENLQRLMPRALDLYRKAGGEG
>Mature_263_residues
ALPSPPRLSRIASLGAVLALCACAANPVTGRQQLILVSGAQGAEMGAQAYRDIKKEKPVLPAGNAYTQRIRAITERLIKA
NDLPAYDWEVNAFADDTANAFALPGGKVGVNTGLAKVARSDAQLAAVIGHEIAHAVSRHGEERVSQQMVIGTGLQLGSAA
LGAGAGGNAQAVALMEQAATLGIVLPYSRTHESEADEIGLFYMARAGYDPREAITLWQSMAAQGGERPPEFLSTHPSEGS
RIENLQRLMPRALDLYRKAGGEG

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=262, Percent_Identity=31.2977099236641, Blast_Score=120, Evalue=1e-27,
Organism=Escherichia coli, GI1788840, Length=217, Percent_Identity=29.9539170506912, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082185, Length=218, Percent_Identity=24.7706422018349, Blast_Score=62, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=253, Percent_Identity=32.8063241106719, Blast_Score=129, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 27765; Mature: 27634

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPSPPRLSRIASLGAVLALCACAANPVTGRQQLILVSGAQGAEMGAQAYRDIKKEKPV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCC
LPAGNAYTQRIRAITERLIKANDLPAYDWEVNAFADDTANAFALPGGKVGVNTGLAKVAR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEECCCCCCCHHHHHHHHHH
SDAQLAAVIGHEIAHAVSRHGEERVSQQMVIGTGLQLGSAALGAGAGGNAQAVALMEQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHH
TLGIVLPYSRTHESEADEIGLFYMARAGYDPREAITLWQSMAAQGGERPPEFLSTHPSEG
HHEEEECCCCCCCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
SRIENLQRLMPRALDLYRKAGGEG
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALPSPPRLSRIASLGAVLALCACAANPVTGRQQLILVSGAQGAEMGAQAYRDIKKEKPV
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCC
LPAGNAYTQRIRAITERLIKANDLPAYDWEVNAFADDTANAFALPGGKVGVNTGLAKVAR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEECCCCCCCHHHHHHHHHH
SDAQLAAVIGHEIAHAVSRHGEERVSQQMVIGTGLQLGSAALGAGAGGNAQAVALMEQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHH
TLGIVLPYSRTHESEADEIGLFYMARAGYDPREAITLWQSMAAQGGERPPEFLSTHPSEG
HHEEEECCCCCCCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
SRIENLQRLMPRALDLYRKAGGEG
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]