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The map label for this gene is ymbA [C]

Identifier: 83593783

GI number: 83593783

Start: 2847284

End: 2847889

Strand: Direct

Name: ymbA [C]

Synonym: Rru_A2448

Alternate gene names: 83593783

Gene position: 2847284-2847889 (Clockwise)

Preceding gene: 83593782

Following gene: 83593785

Centisome position: 65.41

GC content: 67.66

Gene sequence:

>606_bases
ATGAGCACGCCTTTTACCCCCTCTCGCCGTCTTCGGCTGCTTATCGTCTCGGCGATGGCCCTGGGGCTTGCGGCTTGCGG
ATTATCCGGCCCACCGCCCACGCTGTATGTTCTTGGCCAACCGCAATCGGTGGCCACGGCCGCGCCCTTGGGCGGCGATC
GGCCGGTGATCGAAATCAAGCCAGTCAGGGTCTCGGATTATCTTGATACGACCGATCTGGTGGTGCGCGGCCCCGACCGC
ATCATCCCCAGCCAGCAAGGCCGTTGGGCGGAACGGCTGTCGGTCGGCGTGCAGCGGGCGCTTGCCGCCAGCCTGGGCGC
CCGGCTGCCAGGGCTGATCCTCACCACCCAGCCGCCGATCGACCGGCCGGCCCGTCAGCTGCTGGTCGATGTGAGCGGCT
TCGAGGCGATCGAAGGCGGATCGGTGATCCTTACGGCGCGCTGGACGATCGCCGATGGCGCCAGCCGCCAGTCGGTGGTT
TCAAACGGCGCCCAGGTGACGGTGCCCTTGACCACGGCCGGCGATGCCGGGGTGGTTCAGGCGATGAGCAAAGCCGTCGA
CGAGCTTGCCGGCCATATCGCCCCCGGTCTTTCCAACGCCCGCTAA

Upstream 100 bases:

>100_bases
CCGCCGCCCGGGATCTTTCGGCCAGCGCCAGTTCGACCCGCAGCTTCACCCGAACCCTTGAACGCGATCCAAGCGCCCTT
CTGAGTGGGGACACCAAACG

Downstream 100 bases:

>100_bases
CCCTCAGGCGTCGGCCAGTTTGCGCAGGTCCATCGCCTCGACCATGCTGCGCGCCAAACTGTCGTCGATCGACGTCATGG
CCGCCAAACACATCGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSTPFTPSRRLRLLIVSAMALGLAACGLSGPPPTLYVLGQPQSVATAAPLGGDRPVIEIKPVRVSDYLDTTDLVVRGPDR
IIPSQQGRWAERLSVGVQRALAASLGARLPGLILTTQPPIDRPARQLLVDVSGFEAIEGGSVILTARWTIADGASRQSVV
SNGAQVTVPLTTAGDAGVVQAMSKAVDELAGHIAPGLSNAR

Sequences:

>Translated_201_residues
MSTPFTPSRRLRLLIVSAMALGLAACGLSGPPPTLYVLGQPQSVATAAPLGGDRPVIEIKPVRVSDYLDTTDLVVRGPDR
IIPSQQGRWAERLSVGVQRALAASLGARLPGLILTTQPPIDRPARQLLVDVSGFEAIEGGSVILTARWTIADGASRQSVV
SNGAQVTVPLTTAGDAGVVQAMSKAVDELAGHIAPGLSNAR
>Mature_200_residues
STPFTPSRRLRLLIVSAMALGLAACGLSGPPPTLYVLGQPQSVATAAPLGGDRPVIEIKPVRVSDYLDTTDLVVRGPDRI
IPSQQGRWAERLSVGVQRALAASLGARLPGLILTTQPPIDRPARQLLVDVSGFEAIEGGSVILTARWTIADGASRQSVVS
NGAQVTVPLTTAGDAGVVQAMSKAVDELAGHIAPGLSNAR

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20813; Mature: 20682

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPFTPSRRLRLLIVSAMALGLAACGLSGPPPTLYVLGQPQSVATAAPLGGDRPVIEIK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHEECCCCCCCCEEEEE
PVRVSDYLDTTDLVVRGPDRIIPSQQGRWAERLSVGVQRALAASLGARLPGLILTTQPPI
CEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
DRPARQLLVDVSGFEAIEGGSVILTARWTIADGASRQSVVSNGAQVTVPLTTAGDAGVVQ
CCCHHHHEEECCCCCEECCCCEEEEEEEEECCCCCHHHHHCCCCEEEEEEECCCCHHHHH
AMSKAVDELAGHIAPGLSNAR
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STPFTPSRRLRLLIVSAMALGLAACGLSGPPPTLYVLGQPQSVATAAPLGGDRPVIEIK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHEECCCCCCCCEEEEE
PVRVSDYLDTTDLVVRGPDRIIPSQQGRWAERLSVGVQRALAASLGARLPGLILTTQPPI
CEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
DRPARQLLVDVSGFEAIEGGSVILTARWTIADGASRQSVVSNGAQVTVPLTTAGDAGVVQ
CCCHHHHEEECCCCCEECCCCEEEEEEEEECCCCCHHHHHCCCCEEEEEEECCCCHHHHH
AMSKAVDELAGHIAPGLSNAR
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA