Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593777
Identifier: 83593777
GI number: 83593777
Start: 2841918
End: 2842178
Strand: Direct
Name: 83593777
Synonym: Rru_A2442
Alternate gene names: NA
Gene position: 2841918-2842178 (Clockwise)
Preceding gene: 83593776
Following gene: 83593778
Centisome position: 65.29
GC content: 62.07
Gene sequence:
>261_bases ATGGAGGGTTTGCTCATGATCGCCCGCACCCCCAAGCAGATCGGCGCCGCCATCCGCCGTCAACGCCGCAAGCTCGCGCT CACTCAGGCTGACCTGGGAGAGCAAACCAAGCTGCGTCAGGCAACGGTCTCGGCGGTCGAGGCCGGCGAACCGGGAACGC AAATCCGCACGCTCTGCGATATCCTGGCCGCCCTTGATCTGGAATTCGTCATACAGCCGCGAACCAAGGCATCGGTCGAC GAAATCGGCGACATCTTTTAA
Upstream 100 bases:
>100_bases GCGCCGAAGGGGCGCCCTTTTTTGTAGGGGGAAGAGGCGGAGCAATACGCTCAAGCGTATATTGATAAGATATGCGCCCA AGCGTATATCAAGAAGGACC
Downstream 100 bases:
>100_bases TGCCGCGTCCGCACCAAGAGCCGCCGCTCGCGGTTTTCCTGAACAGCCGCCTCGTTGGTCGGCTTAATCGAACGGCGCGT GGCGCCATCGATTTCCAGTA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MEGLLMIARTPKQIGAAIRRQRRKLALTQADLGEQTKLRQATVSAVEAGEPGTQIRTLCDILAALDLEFVIQPRTKASVD EIGDIF
Sequences:
>Translated_86_residues MEGLLMIARTPKQIGAAIRRQRRKLALTQADLGEQTKLRQATVSAVEAGEPGTQIRTLCDILAALDLEFVIQPRTKASVD EIGDIF >Mature_86_residues MEGLLMIARTPKQIGAAIRRQRRKLALTQADLGEQTKLRQATVSAVEAGEPGTQIRTLCDILAALDLEFVIQPRTKASVD EIGDIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9418; Mature: 9418
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGLLMIARTPKQIGAAIRRQRRKLALTQADLGEQTKLRQATVSAVEAGEPGTQIRTLCD CCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH ILAALDLEFVIQPRTKASVDEIGDIF HHHHHCHHHEECCCCCCCHHHHCCCC >Mature Secondary Structure MEGLLMIARTPKQIGAAIRRQRRKLALTQADLGEQTKLRQATVSAVEAGEPGTQIRTLCD CCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH ILAALDLEFVIQPRTKASVDEIGDIF HHHHHCHHHEECCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA