Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593640
Identifier: 83593640
GI number: 83593640
Start: 2666952
End: 2667758
Strand: Direct
Name: 83593640
Synonym: Rru_A2305
Alternate gene names: NA
Gene position: 2666952-2667758 (Clockwise)
Preceding gene: 83593639
Following gene: 83593644
Centisome position: 61.27
GC content: 60.35
Gene sequence:
>807_bases ATGCCCGACGAACCACTGCGAGGAAGAGGTCATGATGGCCCCCTTTTCGGCTTACGGATGGACAAATCCCGCTCTCGCCG CCACCGCTGGACAAGAACCATGACCACAGTCATCGGCTTCGACGCGGACGACACGCTTTGGCATAACGAAACCCATTTCC AGGAGATGCAGCGCGCCTTGGCCGCCATCATCAGCGGCCATACCGGCGAAACCACCCCGATCGACGACCCTCTGATGGCG GTGGAACGGCGCAACCTGAAAAAATATGGCTATGGAGCCAAGGGGTTCGCCCTGTCGATGATCGAAACCGCCCTGGAGTT GACCGATCAGCGGGTTTCCGGCGCCGAGATCGCCCGCATCATCGCCATGGTCCACCGCTTTCTGGACGGCGACATCCATA TCCTTGATGGCGCGGTCGAAACCTTGACGCGCCTGCGCCATAACCATCGGCTGATCCTAATCACCAAGGGTGACGAGATC GAACAACAGGAAAAACTGGCCAAATCCAAGCTGCGGTCTTTCTTCGACACGGTCTATGTCGTTCTTGAGAAAGACCCCGA CACCTATCGTTCGATCCTGGGGCGCGAGGCGATCGACCCCGGCCACTTCGTCATGGTCGGCAATTCGCTGCGCTCGGATA TCCACCCCGTGCTGGCGATCGGCGGCCGGGCCATCCTCATTCCCTATGAGGTGACCTGGAAGCACGAAATGGTCGAGCTG CCAGCGGACGCGCCGAAAGCCTTCGCCACCTTGAACTCGCTCCGCGAGCTGCCGGCCTTCCTGGAAAACGGCGAGAACCG CCGCTAG
Upstream 100 bases:
>100_bases GCGTCCGCCTGCTGATGCCCGCGCCCTGAGGGGCGGGGCGCGGAGAACCGGGGCGCCGGGCGCGATCTCCCCTGTCTGGG GAAGGCCAGCCCCGAATATA
Downstream 100 bases:
>100_bases CCCCCCCGATCCCCCACCCGCGCGGCGGCCGCCCAGGGAAAAGGGATTTTAAAAGGGGTCCGCCCCCTTTTCCTTCTTCT TTTTCCTTCATGTCCCGGCG
Product: haloacid dehalogenase-like hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Hydrolase Haloacid Dehalogenase Family; Haloacid Dehydrogenase Hydrolase; Hydrolase Family Protein; Halogenase-Like Hydrolase; Haloacid Dehalogenase-Like Family Protein; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Family Hydrolase; Hydrolase Haloacid Dehalogenase Family Protein; HAD Family Phosphatase; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPDEPLRGRGHDGPLFGLRMDKSRSRRHRWTRTMTTVIGFDADDTLWHNETHFQEMQRALAAIISGHTGETTPIDDPLMA VERRNLKKYGYGAKGFALSMIETALELTDQRVSGAEIARIIAMVHRFLDGDIHILDGAVETLTRLRHNHRLILITKGDEI EQQEKLAKSKLRSFFDTVYVVLEKDPDTYRSILGREAIDPGHFVMVGNSLRSDIHPVLAIGGRAILIPYEVTWKHEMVEL PADAPKAFATLNSLRELPAFLENGENRR
Sequences:
>Translated_268_residues MPDEPLRGRGHDGPLFGLRMDKSRSRRHRWTRTMTTVIGFDADDTLWHNETHFQEMQRALAAIISGHTGETTPIDDPLMA VERRNLKKYGYGAKGFALSMIETALELTDQRVSGAEIARIIAMVHRFLDGDIHILDGAVETLTRLRHNHRLILITKGDEI EQQEKLAKSKLRSFFDTVYVVLEKDPDTYRSILGREAIDPGHFVMVGNSLRSDIHPVLAIGGRAILIPYEVTWKHEMVEL PADAPKAFATLNSLRELPAFLENGENRR >Mature_267_residues PDEPLRGRGHDGPLFGLRMDKSRSRRHRWTRTMTTVIGFDADDTLWHNETHFQEMQRALAAIISGHTGETTPIDDPLMAV ERRNLKKYGYGAKGFALSMIETALELTDQRVSGAEIARIIAMVHRFLDGDIHILDGAVETLTRLRHNHRLILITKGDEIE QQEKLAKSKLRSFFDTVYVVLEKDPDTYRSILGREAIDPGHFVMVGNSLRSDIHPVLAIGGRAILIPYEVTWKHEMVELP ADAPKAFATLNSLRELPAFLENGENRR
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30398; Mature: 30267
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDEPLRGRGHDGPLFGLRMDKSRSRRHRWTRTMTTVIGFDADDTLWHNETHFQEMQRAL CCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHH AAIISGHTGETTPIDDPLMAVERRNLKKYGYGAKGFALSMIETALELTDQRVSGAEIARI HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH IAMVHRFLDGDIHILDGAVETLTRLRHNHRLILITKGDEIEQQEKLAKSKLRSFFDTVYV HHHHHHHHCCCEEEEHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEE VLEKDPDTYRSILGREAIDPGHFVMVGNSLRSDIHPVLAIGGRAILIPYEVTWKHEMVEL EEECCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCHHHEEC PADAPKAFATLNSLRELPAFLENGENRR CCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PDEPLRGRGHDGPLFGLRMDKSRSRRHRWTRTMTTVIGFDADDTLWHNETHFQEMQRAL CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHH AAIISGHTGETTPIDDPLMAVERRNLKKYGYGAKGFALSMIETALELTDQRVSGAEIARI HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH IAMVHRFLDGDIHILDGAVETLTRLRHNHRLILITKGDEIEQQEKLAKSKLRSFFDTVYV HHHHHHHHCCCEEEEHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEE VLEKDPDTYRSILGREAIDPGHFVMVGNSLRSDIHPVLAIGGRAILIPYEVTWKHEMVEL EEECCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCHHHEEC PADAPKAFATLNSLRELPAFLENGENRR CCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA