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The map label for this gene is 83593591

Identifier: 83593591

GI number: 83593591

Start: 2617532

End: 2617975

Strand: Direct

Name: 83593591

Synonym: Rru_A2256

Alternate gene names: NA

Gene position: 2617532-2617975 (Clockwise)

Preceding gene: 83593589

Following gene: 83593592

Centisome position: 60.13

GC content: 63.74

Gene sequence:

>444_bases
ATGAAACGCATGATGATCGTGGCCGCCCTGGCCGCTTTGACCACCACCACCGTGGCCCAGGCCGCCGACCCCGCCGCCTA
CGTCGAGTACCGCAAAAGCGTTCTGTCGGCCACCAGCAACTACATGAAGGCGATCGGCATCACCCTGAAGGAGGACCTCG
CGGTTCCCAATCAGACCGCCGATCACGCCAAGGCGATCGCCTCGATCATGGAAACCCTTCCCGCCGCCTTCCCCGAAGGC
ACGGCCGGCATCGCCAAGACCGAAGCCAAGGCCGCCATCTGGAAGGATTTCGAGGCTTTCAAGGTCGCCTCCAAGAAGTC
TCAGGATGCCGCTCTTGAACTGGCCTCGGCCGCCGAGACCGGCGACAAGGCGGCCATCGGCGCCAAGCTTCAGGCCCTGG
GCGGCACCTGCAAGGCCTGCCATAAGGAATTCAAGGCCGACTAA

Upstream 100 bases:

>100_bases
TGGATTACATAAGGGTAACTTGAAATACCGACTCGCCTTGCCCATGCTTGGAATGCGGTCTTGCACCGTATGAGTTCTTT
TTTCGATGGGGACATTTTCA

Downstream 100 bases:

>100_bases
AGCTGATCGTCGTCGCGATCCTCTCCAGATCGCTCGGGATTTGCTTTACGATCAGCCTCTTGGAGCGGCGCACCGGACCC
GGATGTCAGGCGCGCCGCTC

Product: cytochrome c, class II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKRMMIVAALAALTTTTVAQAADPAAYVEYRKSVLSATSNYMKAIGITLKEDLAVPNQTADHAKAIASIMETLPAAFPEG
TAGIAKTEAKAAIWKDFEAFKVASKKSQDAALELASAAETGDKAAIGAKLQALGGTCKACHKEFKAD

Sequences:

>Translated_147_residues
MKRMMIVAALAALTTTTVAQAADPAAYVEYRKSVLSATSNYMKAIGITLKEDLAVPNQTADHAKAIASIMETLPAAFPEG
TAGIAKTEAKAAIWKDFEAFKVASKKSQDAALELASAAETGDKAAIGAKLQALGGTCKACHKEFKAD
>Mature_147_residues
MKRMMIVAALAALTTTTVAQAADPAAYVEYRKSVLSATSNYMKAIGITLKEDLAVPNQTADHAKAIASIMETLPAAFPEG
TAGIAKTEAKAAIWKDFEAFKVASKKSQDAALELASAAETGDKAAIGAKLQALGGTCKACHKEFKAD

Specific function: Cytochrome c' is the most widely occurring bacterial c- type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYCP_RHORT (P00144)

Other databases:

- EMBL:   CP000230
- PIR:   A00137
- RefSeq:   YP_427343.1
- ProteinModelPortal:   P00144
- SMR:   P00144
- STRING:   P00144
- GeneID:   3835684
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A2256
- NMPDR:   fig|1085.1.peg.3733
- eggNOG:   NOG68734
- HOGENOM:   HBG657074
- OMA:   IASIMET
- BioCyc:   RRUB269796:RRU_A2256-MONOMER
- GO:   GO:0006810
- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127
- InterPro:   IPR015984
- Gene3D:   G3DSA:1.20.120.10
- PIRSF:   PIRSF000027
- PRINTS:   PR00608

Pfam domain/function: PF01322 Cytochrom_C_2; SSF47175 Cyt_c_b562

EC number: NA

Molecular weight: Translated: 15292; Mature: 15292

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS51009 CYTCII

Important sites: BINDING 137-137 BINDING 140-140

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMMIVAALAALTTTTVAQAADPAAYVEYRKSVLSATSNYMKAIGITLKEDLAVPNQTA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCH
DHAKAIASIMETLPAAFPEGTAGIAKTEAKAAIWKDFEAFKVASKKSQDAALELASAAET
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
GDKAAIGAKLQALGGTCKACHKEFKAD
CCHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MKRMMIVAALAALTTTTVAQAADPAAYVEYRKSVLSATSNYMKAIGITLKEDLAVPNQTA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCH
DHAKAIASIMETLPAAFPEGTAGIAKTEAKAAIWKDFEAFKVASKKSQDAALELASAAET
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
GDKAAIGAKLQALGGTCKACHKEFKAD
CCHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 172499; 1316891