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The map label for this gene is petR [H]

Identifier: 83593560

GI number: 83593560

Start: 2584140

End: 2584880

Strand: Direct

Name: petR [H]

Synonym: Rru_A2225

Alternate gene names: 83593560

Gene position: 2584140-2584880 (Clockwise)

Preceding gene: 83593559

Following gene: 83593561

Centisome position: 59.37

GC content: 69.5

Gene sequence:

>741_bases
ATGAGCGACCCCGCCCTGCCTGTGGCCCCCGTCGCCCCCGTGACCGAGGAACCGCCCCATATCCTGGTGGTCGATGACGA
CACCCGCATCCTCGCCCTGCTCAAACGCTTTTTGTCCGAACGCGGCTTCATCGTCACCGCCGCCGCCGATGCGGCCGAGG
CGCGGCGCCAGCTTGCCGCCCTGCGCTTCGATCTGCTGGTGGTCGATGTGATGATGCCCGGCGAAAGCGGACTGGAGCTG
ACACGCTCGATCCGCGAGGACTCCGACGTTCCCATCCTCATCCTGACGGCGATGGACCAGCCCGACGACCGGGTCAGCGG
CCTCGAAAGCGGCGCCGATGATTATCTGGCCAAGCCCTTCGATCCGCGCGAATTGGTCTTGCGGGTCAATGGCATCCTGC
GGCGCCTGCGCCAAGCCCCCGATCTGCCGCCCGCCGCCCCGCCCGAGGGCCCCTTGCCGCTGGGAGCCTGCGTTTTCGAT
CCGCACCGCCAGGAACTGCTGCGCGGCGACGAGGTGGTGCGACTGACCACCGCCGAAACCGCCCTGCTCAGCACGCTCGC
CGCCCGGGCCGGCGAGGCGATCAGCCGCGAGGATCTGGCTGAACTGACCGGGGTGGCCGGCAACCCCCGGGCCATCGATG
TGCAGGTGACCCGCCTGCGCAAGAAAATCGAAGCCGACCCCCGCGTGCCCCGCCACTTGCAGACGGTGCGCGGACGCGGC
TACATGCTTCGTCCGGGCTGA

Upstream 100 bases:

>100_bases
TTGGCATGATCGATGGCCCGGCCCGCGAGCGCTTCGCCGCCGCCGCCAAGCGCGAGACCCCGCCCTCGCCGCCGCGCGTC
AGCCGGGCCGGAGCACGCCG

Downstream 100 bases:

>100_bases
CACGCCCCTCGCGGTGAAGGGCGCCTTTCGCGCCTCGGCAAAACAAGGACGCCGCCATGATCGGTCTTTGGGGGCTTGAC
CCCGCCCAGCCAGTCCTGGG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSDPALPVAPVAPVTEEPPHILVVDDDTRILALLKRFLSERGFIVTAAADAAEARRQLAALRFDLLVVDVMMPGESGLEL
TRSIREDSDVPILILTAMDQPDDRVSGLESGADDYLAKPFDPRELVLRVNGILRRLRQAPDLPPAAPPEGPLPLGACVFD
PHRQELLRGDEVVRLTTAETALLSTLAARAGEAISREDLAELTGVAGNPRAIDVQVTRLRKKIEADPRVPRHLQTVRGRG
YMLRPG

Sequences:

>Translated_246_residues
MSDPALPVAPVAPVTEEPPHILVVDDDTRILALLKRFLSERGFIVTAAADAAEARRQLAALRFDLLVVDVMMPGESGLEL
TRSIREDSDVPILILTAMDQPDDRVSGLESGADDYLAKPFDPRELVLRVNGILRRLRQAPDLPPAAPPEGPLPLGACVFD
PHRQELLRGDEVVRLTTAETALLSTLAARAGEAISREDLAELTGVAGNPRAIDVQVTRLRKKIEADPRVPRHLQTVRGRG
YMLRPG
>Mature_245_residues
SDPALPVAPVAPVTEEPPHILVVDDDTRILALLKRFLSERGFIVTAAADAAEARRQLAALRFDLLVVDVMMPGESGLELT
RSIREDSDVPILILTAMDQPDDRVSGLESGADDYLAKPFDPRELVLRVNGILRRLRQAPDLPPAAPPEGPLPLGACVFDP
HRQELLRGDEVVRLTTAETALLSTLAARAGEAISREDLAELTGVAGNPRAIDVQVTRLRKKIEADPRVPRHLQTVRGRGY
MLRPG

Specific function: Necessary for photosynthetic and respiratory growth. Probable promoter-specific protein mediating the interaction between DNA and RNA polymerase [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=43.4042553191489, Blast_Score=178, Evalue=3e-46,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=36.5217391304348, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=39.8230088495575, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=32.7510917030568, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=35.6828193832599, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=34.375, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=34.8017621145374, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1788394, Length=234, Percent_Identity=35.8974358974359, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1787375, Length=236, Percent_Identity=36.0169491525424, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=35.2422907488987, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786911, Length=230, Percent_Identity=33.9130434782609, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=31.0344827586207, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=32.15859030837, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1790860, Length=232, Percent_Identity=31.8965517241379, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790299, Length=107, Percent_Identity=40.1869158878505, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=33.0578512396694, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788713, Length=110, Percent_Identity=40.9090909090909, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790437, Length=109, Percent_Identity=34.8623853211009, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=102, Percent_Identity=34.3137254901961, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26798; Mature: 26667

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPALPVAPVAPVTEEPPHILVVDDDTRILALLKRFLSERGFIVTAAADAAEARRQLAA
CCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHH
LRFDLLVVDVMMPGESGLELTRSIREDSDVPILILTAMDQPDDRVSGLESGADDYLAKPF
HHHHHHEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHCCCC
DPRELVLRVNGILRRLRQAPDLPPAAPPEGPLPLGACVFDPHRQELLRGDEVVRLTTAET
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHHHHCCCCEEEEEHHHH
ALLSTLAARAGEAISREDLAELTGVAGNPRAIDVQVTRLRKKIEADPRVPRHLQTVRGRG
HHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHCCCC
YMLRPG
EEECCC
>Mature Secondary Structure 
SDPALPVAPVAPVTEEPPHILVVDDDTRILALLKRFLSERGFIVTAAADAAEARRQLAA
CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHH
LRFDLLVVDVMMPGESGLELTRSIREDSDVPILILTAMDQPDDRVSGLESGADDYLAKPF
HHHHHHEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHCCCC
DPRELVLRVNGILRRLRQAPDLPPAAPPEGPLPLGACVFDPHRQELLRGDEVVRLTTAET
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHHHHCCCCEEEEEHHHH
ALLSTLAARAGEAISREDLAELTGVAGNPRAIDVQVTRLRKKIEADPRVPRHLQTVRGRG
HHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHCCCC
YMLRPG
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]