Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is petP [H]
Identifier: 83593559
GI number: 83593559
Start: 2583604
End: 2584143
Strand: Direct
Name: petP [H]
Synonym: Rru_A2224
Alternate gene names: 83593559
Gene position: 2583604-2584143 (Clockwise)
Preceding gene: 83593557
Following gene: 83593560
Centisome position: 59.35
GC content: 67.96
Gene sequence:
>540_bases ATGAGCGAGGTCAAATCGGGCGTGAACCCCCTTTTTCTGCGCGAGGAGGAACTGCGCCAGGGCATCGAGCTGCTGTTTTT CGCCTACCGCGATTTCACCAGCGAGGCCGACGCCATGCTGGCCAAGCACAATTTCGGGCGGGCCCACCACCGGGTGATCT ATTTCGTCGGCCGCGAGCCGAAGATCGGCGTCAGCGCCCTGCTGGGGATCCTCGGCATCACCAAGCAAAGCCTGTCGCGC GTGCTGTCGCAACTGGTCGAGGAAGGCCTGATCGTTCAGCATCGCGGCCCACGCGACGGTCGCCAACGCCTTCTGGAACT GACCGAAAAGGGCATCGACATGGAACGCCGCCTGACCGAGGCCCAGCGCCGGCGCTTCGCCCGCGCCTATCGCGAAGCCG GGGCCGAGGCGGTCGAGGGGTTCCGCAAGGTCATGCTTGGCATGATCGATGGCCCGGCCCGCGAGCGCTTCGCCGCCGCC GCCAAGCGCGAGACCCCGCCCTCGCCGCCGCGCGTCAGCCGGGCCGGAGCACGCCGATGA
Upstream 100 bases:
>100_bases ACTATGTCAACATACCTGACCCAAATGCCGCACGAGATTTTTTCATGCAGGATCTAAGCCCTATAAAATCACTCTCAACA CCGAAGGCGGGGATCGAGGG
Downstream 100 bases:
>100_bases GCGACCCCGCCCTGCCTGTGGCCCCCGTCGCCCCCGTGACCGAGGAACCGCCCCATATCCTGGTGGTCGATGACGACACC CGCATCCTCGCCCTGCTCAA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSEVKSGVNPLFLREEELRQGIELLFFAYRDFTSEADAMLAKHNFGRAHHRVIYFVGREPKIGVSALLGILGITKQSLSR VLSQLVEEGLIVQHRGPRDGRQRLLELTEKGIDMERRLTEAQRRRFARAYREAGAEAVEGFRKVMLGMIDGPARERFAAA AKRETPPSPPRVSRAGARR
Sequences:
>Translated_179_residues MSEVKSGVNPLFLREEELRQGIELLFFAYRDFTSEADAMLAKHNFGRAHHRVIYFVGREPKIGVSALLGILGITKQSLSR VLSQLVEEGLIVQHRGPRDGRQRLLELTEKGIDMERRLTEAQRRRFARAYREAGAEAVEGFRKVMLGMIDGPARERFAAA AKRETPPSPPRVSRAGARR >Mature_178_residues SEVKSGVNPLFLREEELRQGIELLFFAYRDFTSEADAMLAKHNFGRAHHRVIYFVGREPKIGVSALLGILGITKQSLSRV LSQLVEEGLIVQHRGPRDGRQRLLELTEKGIDMERRLTEAQRRRFARAYREAGAEAVEGFRKVMLGMIDGPARERFAAAA KRETPPSPPRVSRAGARR
Specific function: Necessary for photosynthetic and respiratory growth [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 20254; Mature: 20123
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVKSGVNPLFLREEELRQGIELLFFAYRDFTSEADAMLAKHNFGRAHHRVIYFVGREP CCCCHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEECCCC KIGVSALLGILGITKQSLSRVLSQLVEEGLIVQHRGPRDGRQRLLELTEKGIDMERRLTE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHH AQRRRFARAYREAGAEAVEGFRKVMLGMIDGPARERFAAAAKRETPPSPPRVSRAGARR HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SEVKSGVNPLFLREEELRQGIELLFFAYRDFTSEADAMLAKHNFGRAHHRVIYFVGREP CCCHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEECCCC KIGVSALLGILGITKQSLSRVLSQLVEEGLIVQHRGPRDGRQRLLELTEKGIDMERRLTE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHH AQRRRFARAYREAGAEAVEGFRKVMLGMIDGPARERFAAAAKRETPPSPPRVSRAGARR HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1323023 [H]