| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is bfmBAA [H]
Identifier: 82751122
GI number: 82751122
Start: 1512971
End: 1513963
Strand: Reverse
Name: bfmBAA [H]
Synonym: SAB1390c
Alternate gene names: 82751122
Gene position: 1513963-1512971 (Counterclockwise)
Preceding gene: 82751123
Following gene: 82751121
Centisome position: 55.2
GC content: 37.97
Gene sequence:
>993_bases ATGATTGATTATAAATCATTAGGCCTTAGCGAAGAAGACCTAAAAGTAATATATAAATGGATGGATTTAGGTAGAAAAAT AGATGAAAGACTGTGGTTATTGAACCGTGCAGGTAAAATTCCATTTGTTGTAAGTGGTCAAGGACAAGAAGCAACTCAGA TTGGGATGGCATATGCATTAGAAGAAGGTGATATTACTGCGCCTTATTATAGAGATCTAGCTTTCGTTACTTATATGGGT ATATCAGCGTATGATACGTTTTTATCAGCGTTTGGAAAGAAAGACGATGTTAACTCTGGTGGAAAACAAATGCCATCACA CTTTAGTAGTAGAGCAAAGAATATTTTGTCACAAAGTTCACCGGTAGCAACTCAAATACCCCATGCTGTTGGTGCTGCTT TAGCTCTAAAAATGGATGGTAAGAAGAAAATTGCAACAGCAACTGTTGGTGAAGGTAGCTCAAACCAAGGTGACTTCCAT GAAGGTTTAAACTTCGCGGGTGTACACAAACTTCCTTTTGTATGTGTCATTATAAATAATAAATATGCAATTTCAGTACC TGATTCATTACAATACGCAGCTGAAAAATTATCGGATAGAGCACTTGGCTACGGTATACATGGTGAACAAGTAGATGGTA ATGATCCATTAGCAATGTATAAAGCGATGAAAGAAGCAAGAGATCGAGCTATTTCTGGTCAAGGTTCAACTTTGATTGAA GCAGTAACTTCTCGTATGACAGCACATTCATCAGATGATGACGACCAATATCGTACGAAAGAAGAGCGTGAAGCGCTTAA AAAAGCAGACTGCAACGAAAAGTTCAAAAAAGAGTTGCTTTCAGCTGACATTATCGATGATGCTTGGTTGGCAGAAATAG AAGCAGAACATAAAGACATTATCAATAAAGCGACAAAGGCTGCTGAAGACGCGCCATATCCAAGTGTCGAAGAAGCCTAT GCATTTGTGTATGAAGAAGGGAGTCTTAACTAA
Upstream 100 bases:
>100_bases ACTAACAACACACGCGCATCCTTCCATCTCTGAAGTGTTGATGGAATTAGGATTGAAAGCAGAAAGTAGAGCTATTCACG TATAAATAGGAGGATTTAAC
Downstream 100 bases:
>100_bases TGGATAAATTATCTTATTTAGAGGCGATTCGCCAGGCACAAGACTTAGCATTACAACAAAATAAAGATGTATTTATTCTT GGTGAAGATGTTGGTAAAAA
Product: 2-oxoisovalerate dehydrogenase alpha subunit
Products: NA
Alternate protein names: Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; BCKDH E1-alpha [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFVTYMG ISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALALKMDGKKKIATATVGEGSSNQGDFH EGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIE AVTSRMTAHSSDDDDQYRTKEEREALKKADCNEKFKKELLSADIIDDAWLAEIEAEHKDIINKATKAAEDAPYPSVEEAY AFVYEEGSLN
Sequences:
>Translated_330_residues MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFVTYMG ISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALALKMDGKKKIATATVGEGSSNQGDFH EGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIE AVTSRMTAHSSDDDDQYRTKEEREALKKADCNEKFKKELLSADIIDDAWLAEIEAEHKDIINKATKAAEDAPYPSVEEAY AFVYEEGSLN >Mature_330_residues MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFVTYMG ISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALALKMDGKKKIATATVGEGSSNQGDFH EGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIE AVTSRMTAHSSDDDDQYRTKEEREALKKADCNEKFKKELLSADIIDDAWLAEIEAEHKDIINKATKAAEDAPYPSVEEAY AFVYEEGSLN
Specific function: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components:branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltran
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BCKDHA family [H]
Homologues:
Organism=Homo sapiens, GI11386135, Length=320, Percent_Identity=35.3125, Blast_Score=181, Evalue=8e-46, Organism=Homo sapiens, GI258645172, Length=320, Percent_Identity=35.3125, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI4505685, Length=319, Percent_Identity=30.0940438871473, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI291084742, Length=319, Percent_Identity=30.0940438871473, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI291084744, Length=326, Percent_Identity=29.1411042944785, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI4885543, Length=283, Percent_Identity=30.7420494699647, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI291084757, Length=171, Percent_Identity=32.7485380116959, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI86563355, Length=316, Percent_Identity=34.4936708860759, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI86563357, Length=316, Percent_Identity=34.4936708860759, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17536047, Length=323, Percent_Identity=30.3405572755418, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI32564172, Length=323, Percent_Identity=30.3405572755418, Blast_Score=113, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6321026, Length=324, Percent_Identity=29.6296296296296, Blast_Score=105, Evalue=8e-24, Organism=Drosophila melanogaster, GI21355903, Length=328, Percent_Identity=34.7560975609756, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI24639748, Length=319, Percent_Identity=27.5862068965517, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24639746, Length=280, Percent_Identity=28.9285714285714, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24639740, Length=280, Percent_Identity=28.9285714285714, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24639744, Length=280, Percent_Identity=28.9285714285714, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI28571106, Length=280, Percent_Identity=28.9285714285714, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: =1.2.4.4 [H]
Molecular weight: Translated: 36258; Mature: 36258
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVVSGQGQEATQIGMAYAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHEE EEGDITAPYYRDLAFVTYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC PVATQIPHAVGAALALKMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINN CCHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCEEEEEECC KYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIE EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH AVTSRMTAHSSDDDDQYRTKEEREALKKADCNEKFKKELLSADIIDDAWLAEIEAEHKDI HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH INKATKAAEDAPYPSVEEAYAFVYEEGSLN HHHHHHHHCCCCCCCHHHHHEEEECCCCCC >Mature Secondary Structure MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVVSGQGQEATQIGMAYAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHEE EEGDITAPYYRDLAFVTYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC PVATQIPHAVGAALALKMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINN CCHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCEEEEEECC KYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIE EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH AVTSRMTAHSSDDDDQYRTKEEREALKKADCNEKFKKELLSADIIDDAWLAEIEAEHKDI HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH INKATKAAEDAPYPSVEEAYAFVYEEGSLN HHHHHHHHCCCCCCCHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8504804; 8969508; 9384377 [H]