| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is yqjQ [H]
Identifier: 82751095
GI number: 82751095
Start: 1490211
End: 1490966
Strand: Reverse
Name: yqjQ [H]
Synonym: SAB1363c
Alternate gene names: 82751095
Gene position: 1490966-1490211 (Counterclockwise)
Preceding gene: 82751097
Following gene: 82751094
Centisome position: 54.36
GC content: 33.6
Gene sequence:
>756_bases ATGAAAGGACAACATTTTATAGTGACTGGTGGTACAAGTGGTTTAGGTTTATCGATTGTCCGAAAGTTACTAGAAAATAA AGTGCATGTAACGTTGTTGGTGCGTGATGTTGATAAAGCAGCTAGAATCTTTGAACAGGAATTGGGGAAAACTATAAATG TTATTCCTTGTGACTTAAATGATTTGAAGTCGATACAGGCACTGCAATTTGAAGACAATACATTATTCGATGGATTCATT TATAGTGCAGGTTTAGGTTATTTCAAATCTATTTCAGACCATAGTTTTTCAGAAATGATTGAAACGTATCAGCTTAATTT AATTAGTTTTAATGTTTTATATCCTGTGTTGAGACCATATTTAACATCTAACGCACATATTGTAGGTATTTCAAGTCAAG CTGCATTTTCCACACAAGCAAATGCTGCACATTATGGGGCATCGAAAGCAGGGTTTTATGCATTAATGAATGCTTTAAGA CTAGAGTCACCAAACTTAAATATCATGACAGTTAATGTTGGCCCGATTGATACACCTTTTCATCAAAAAGCCGACCCATC AATGAAGTATGCTAAAAAGATGGGGAAAATTATGCTTGATGCTAATCAGCTTGCAGAAGATATCATTTATGGCATTAAAA CAAAACAATTGGAAATTAATCGGCCTAAATGGATGCATCATGCGTTGAAAATGTATCAAATTGCGCCTAGATTTTTTGAA CGATGTTTCCCTAAATTATTTAAAAATAAAGCATAA
Upstream 100 bases:
>100_bases TTCTTATTATTGTATATATATTAGGAAAGATAATCAACTTGCCTCAATTATGTAAAGTTGATAAATTACATTCTATATAA TTGAAAAGGAAGGTTAATTG
Downstream 100 bases:
>100_bases ATAGGTGGGATGGCAATGAACTGTCAATCGGAGAATGTGGTAAGACTTTGTGTACGATATGCGGAACAACTATCAGTATT TGAAGAATTTACAGTGCTGG
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKAARIFEQELGKTINVIPCDLNDLKSIQALQFEDNTLFDGFI YSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYPVLRPYLTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALR LESPNLNIMTVNVGPIDTPFHQKADPSMKYAKKMGKIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE RCFPKLFKNKA
Sequences:
>Translated_251_residues MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKAARIFEQELGKTINVIPCDLNDLKSIQALQFEDNTLFDGFI YSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYPVLRPYLTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALR LESPNLNIMTVNVGPIDTPFHQKADPSMKYAKKMGKIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE RCFPKLFKNKA >Mature_251_residues MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKAARIFEQELGKTINVIPCDLNDLKSIQALQFEDNTLFDGFI YSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYPVLRPYLTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALR LESPNLNIMTVNVGPIDTPFHQKADPSMKYAKKMGKIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE RCFPKLFKNKA
Specific function: Unknown
COG id: COG0300
COG function: function code R; Short-chain dehydrogenases of various substrate specificities
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 28239; Mature: 28239
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKAARIFEQELGKTINVIPCDLN CCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHCCEEEEEECCCH DLKSIQALQFEDNTLFDGFIYSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYPVLRPY HHHHHEEEEECCCCEEHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALRLESPNLNIMTVNVGPIDTPF HCCCCEEEEECCCCHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC HQKADPSMKYAKKMGKIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE CCCCCCHHHHHHHHHHHEECHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH RCFPKLFKNKA HHHHHHHCCCC >Mature Secondary Structure MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKAARIFEQELGKTINVIPCDLN CCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHHCCEEEEEECCCH DLKSIQALQFEDNTLFDGFIYSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYPVLRPY HHHHHEEEEECCCCEEHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALRLESPNLNIMTVNVGPIDTPF HCCCCEEEEECCCCHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC HQKADPSMKYAKKMGKIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE CCCCCCHHHHHHHHHHHEECHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH RCFPKLFKNKA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]