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The map label for this gene is 82750315

Identifier: 82750315

GI number: 82750315

Start: 626171

End: 626806

Strand: Direct

Name: 82750315

Synonym: SAB0561

Alternate gene names: NA

Gene position: 626171-626806 (Clockwise)

Preceding gene: 82750314

Following gene: 82750316

Centisome position: 22.83

GC content: 28.46

Gene sequence:

>636_bases
ATGTTAGGAACTGATGAATTGTATAAATTGTTATATAGGCATATGGGACCTCAAAATTGGTGGCCTGCTGATAATGACAT
TGAAATGATGTTAGGTGCAATTTTAGTTCAAAATACTAGATGGCGAAATGCAGAAATTGCATTGAATCAGATTAAAGAAC
ACACGCATTTTAATCCAAATCATGTATTAGAACTACCTATTGAAACGTTACAATCATTGATACGTCCAAGTGGCTTTTAT
AAAAGTAAATCACTGACGATTAAAACATTATTAACATGGTTAGCACGACATCATTTCAATTATCAAGAGATTAATGAGCG
ATATAAAGCTGAATTAAGAAAAGAATTATTGTCTTTGAAAGGTATTGGAAGTGAAACAGCAGATGTCTTACTTGTTTATA
TATTCGGACGTATTGAATTTATTCCAGATAGCTATACAAGAAAAATATATGATAAATTAGGATATGAAAACACTAAAAGT
TATGATCAATTAAAAAAAGTAGTCACATTACCAAATCATTTTACAAATCAAGATGCTAATGAATTTCATGCTCTGTTAGA
TGTATTTGGTAAACATTACTTTAGAGATAAAGATATAAAGAATTATGATTTTTTAGAACCTTACTTTAAAAAGTAA

Upstream 100 bases:

>100_bases
TGTGAATAAGGTTAAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCATAAGAGCCCCTAGTCTTTAAAGCTCAAGGG
GCTCTAAAAGGAGGATGTAA

Downstream 100 bases:

>100_bases
ACGCTGTGAAGTTAGATAGATGAGTTTATATGAAATATAAAAAATAATTTACTATTTTCTTTTAGTATGTGGACTTATAT
AATAAATAGAAGCGTATAAA

Product: DNA repair endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLGTDELYKLLYRHMGPQNWWPADNDIEMMLGAILVQNTRWRNAEIALNQIKEHTHFNPNHVLELPIETLQSLIRPSGFY
KSKSLTIKTLLTWLARHHFNYQEINERYKAELRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKS
YDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK

Sequences:

>Translated_211_residues
MLGTDELYKLLYRHMGPQNWWPADNDIEMMLGAILVQNTRWRNAEIALNQIKEHTHFNPNHVLELPIETLQSLIRPSGFY
KSKSLTIKTLLTWLARHHFNYQEINERYKAELRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKS
YDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK
>Mature_211_residues
MLGTDELYKLLYRHMGPQNWWPADNDIEMMLGAILVQNTRWRNAEIALNQIKEHTHFNPNHVLELPIETLQSLIRPSGFY
KSKSLTIKTLLTWLARHHFNYQEINERYKAELRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKS
YDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK

Specific function: Unknown

COG id: COG2231

COG function: function code L; Uncharacterized protein related to Endonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: 4.2.99.18

Molecular weight: Translated: 25117; Mature: 25117

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTDELYKLLYRHMGPQNWWPADNDIEMMLGAILVQNTRWRNAEIALNQIKEHTHFNPN
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
HVLELPIETLQSLIRPSGFYKSKSLTIKTLLTWLARHHFNYQEINERYKAELRKELLSLK
CEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKSYDQLKKVVTLPNHFTNQDAN
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHH
EFHALLDVFGKHYFRDKDIKNYDFLEPYFKK
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MLGTDELYKLLYRHMGPQNWWPADNDIEMMLGAILVQNTRWRNAEIALNQIKEHTHFNPN
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
HVLELPIETLQSLIRPSGFYKSKSLTIKTLLTWLARHHFNYQEINERYKAELRKELLSLK
CEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKSYDQLKKVVTLPNHFTNQDAN
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHH
EFHALLDVFGKHYFRDKDIKNYDFLEPYFKK
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]