Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
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Accession | NC_007614 |
Length | 3,184,243 |
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The map label for this gene is 82703223
Identifier: 82703223
GI number: 82703223
Start: 2395305
End: 2397989
Strand: Reverse
Name: 82703223
Synonym: Nmul_A2104
Alternate gene names: NA
Gene position: 2397989-2395305 (Counterclockwise)
Preceding gene: 82703234
Following gene: 82703217
Centisome position: 75.31
GC content: 53.74
Gene sequence:
>2685_bases ATGCCACTTATCGCCCCCGACTACAACACCGCCTTTACCCGCGATGTTCTCGGACGTTACGACTGCAATACCTTTGACGA AGCGCTCGTTACCATAGATCCAAACGCCCGTGCCGCTGCCGGATTGCCTGGCCGAGGCGATCTTCGGCCGTTTGATTTCA TCATAATTGGCGGGGGCACATTTGGTGCGGCTATTGCTGAACATCTGTGGTTCCGAAGCACTCAGCGCAGTGAGCGTATT CTCGTGCTTGAGGCTGGTCCCTTCCTCCTACCGGAACACGTGCAGAATCTACCAATGCTCGGCCTCGATACCGCTGGCGC CCGCAAGGATCATTCGCTGCAAGGCGAAGTCTGGGGCCTTGCCTGGAATTCAAGTGATCCTTTCGGTTTTCCTGGGCTTG CTTACTGCCTGGGCGGACGCTCGATTTACTGGGGTGGGTGGTTGCCCCGATTGCTTGACGCAGAAATGCCAAAAGACGTT TGGCCAAAAGGGGTGCTCGACGATTTAACGGCAAAGGTTCTGCCAGATGGTCGAAAGGGTTATTTCCGGCAATCAAGCGA TCAGATCGGGGTCACAGAGACGAATGATTTCATTTTTGGCGATTTACACCGGGCGATGCGGCAACAGCTGTTCGGAGCCC TCTCCTCGATCCCTGATGTATATGATCTTGCGTTGCTGCCCGATCATCCCGCAGTCTATTATGGCAACACTCCAGTAACA ATCAACGATTTGGCCAAGCTGCTTGGCATCGATAAATTGCCGAGTCCGCCGCCTTCTATCCAGAAGCTCCGCGATGAAGC AAAACTTGAAGCACCATTGGCCGTGCAGGGACAAGTGGGGCACGCCGGGTTTTTTCCGTTTAACAAATTCAGCGCGGTTC CGTTACTCATGAAGGCAGCCCGCGAGGCGTCAACCCAAACCCCGTTCGATGGAGTAATAAATCGGCTTGATGACGTAAAA AAACGGCTAATGGTCGTGGAACGCTGCCACGTCACGCAACTCAACACTGTCAATACCGAAGGGGGGCGACGCGTGAGCGA GATCGTTACCGAGCGGGGAGTGCTGCCTGTTTCCCCGGACAGCAAAGTCATCATTGCTCTCGGCACGATCGAGAGCGCTC GTCTGGCGCTAACTTCCTTTGGGACGGATGGAAAAATTGGCAGGAACCTGATAGCCCATTTACGCTCGAATGTCGATTTT CGAGTTCCCCGCGCGGCACTGGCAGCGCTGCCGCCGGCAGTCAAAGCCCTCGAAGCGTCGGCGCTTTTTGTAAAAGGCCG ACATGAGTTCAAGAAGGCCGATGGTTCCGCAGATGGTTTTGCCCACTTCCATTTCCAGATTACTGCGTCAGGTCTGGGCA CCAACGGGACCAATTCTGAAGCTGAGCTCTTCAAGAAAATCCCGGACATTGACCTGTTCGATGCACACAAGAATGCGACT GACACACACGTCGTCATTACGATTCGCGGCATCGGTGAGATGGAGCCCAAGAACGACAGTGACTTCGGTAGCTCGGTTAC GCTCGATCTTGATCCGCAACAAAAAGACGAATTCCAGGCACGGCGAGCATTTGTGAACCTCCAGCCCAGTTCTCGCGACT ACGAACTGTGGGATGCGATGGATAAGGCGTCGGATGAGGTCGCGAAAGTCTTTGCCAACGGTCAGAAAATCGATGTCATC AAGAACGGAAATGTGATTGTGACGAATATTGATCCGAGTTCACTTGCAACGGTTCTGCCATATAAATTCTCTGATCAGGC CGGTCGGGGTCGCCGCGATGGTCTGGGCACGACACATCATGAAGCCGGAACGTTGCGAATGGGAGAGGATCCGAACAAAT CGGTGACCGATCCCGATTGCCGTTTCCATAATGTGACAAATACTTATGTCGCTGGACCCGCACTCTTTCCTACCATGGGT TCACCAAACCCGATGCTCACAGGCATTGCCCTGGTCCGCCGACTAGGAGATCACCTGATGCCGGAGCCGCCACTCTTGGT ATCGGAACCAGGTTTCACGTACCTATTTGACGGAAGCGATGCGCAGTTCGCGAATTGGGAGATGGCTGGAGGAGGCTCGT TCTCCCGGTTTGGCCGCACGATAATTGCCCAGCAGAATGAAAAAGGCATGGGCTTGCTCTTCTACAAGCCAAAACCCTTT GAGGATTTCACACTACGCCTCGATTTTCTTCTTCCTCACCCGCGAGGCAATGGCAACGATAACTCGGGTGTCTTCGTTCG GTTCCGTGATTCGCGCCTGCCTGATCCCGCTCCCGATCCGGTCGATCCCGCAGACAATGCGGCCTTCGTTGCGGTTCATA CTGGGTTTGAAATCCAGATCGATGAAGAAGCACGGGGTGATACGCGTTTCGGCGAGCCGGATGGTTCATTTTTTGCGAGA ACCGGGGCAATTTATAAAATCAAGTCATTGGGGACCGGCGAAGGGCAGCAGAATTACCAAAACAACATCTCTCTTGCGGC ACGACAATGGCATCACTACGAAATCGAGGTAAAAAAGCAGGATTACGTTGTTCGGCTCAACGGTCAGGAGGTAACCCGGT TTAAGCGTAGCCCCTCCGATACTGCTAGAGGGAATCCACCCAGCGTTGATCCCAATTCAGGTTATATTGGGCTGCAAACG CATACAGGGAACGTAGCTTTCGCGAATGTTCGGATCAATGCATAG
Upstream 100 bases:
>100_bases AGAACTAGAACTGTAACTGTATGGCGTCCTGTTCGATAGAACCAGAAAAATTCTACGAATATTCAAAATCCTCGGATATT AAATATAGGAGCAAACCGCC
Downstream 100 bases:
>100_bases AGTGGAGAACTCTATCATTTCGAAGGTTTAAAAGTTCTGTCGGTTAGTTCGGTTGCTGTGGGGGAAAGCCGAAAAAGCAG TTTTCAATGTTCCATCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; GMC Oxidoreductase; Glucose-Methanol-Choline Oxidoreductase; Crp/Fnr Family Transcriptional Regulator; Glucose/Sorbosone Dehydrogenase
Number of amino acids: Translated: 894; Mature: 893
Protein sequence:
>894_residues MPLIAPDYNTAFTRDVLGRYDCNTFDEALVTIDPNARAAAGLPGRGDLRPFDFIIIGGGTFGAAIAEHLWFRSTQRSERI LVLEAGPFLLPEHVQNLPMLGLDTAGARKDHSLQGEVWGLAWNSSDPFGFPGLAYCLGGRSIYWGGWLPRLLDAEMPKDV WPKGVLDDLTAKVLPDGRKGYFRQSSDQIGVTETNDFIFGDLHRAMRQQLFGALSSIPDVYDLALLPDHPAVYYGNTPVT INDLAKLLGIDKLPSPPPSIQKLRDEAKLEAPLAVQGQVGHAGFFPFNKFSAVPLLMKAAREASTQTPFDGVINRLDDVK KRLMVVERCHVTQLNTVNTEGGRRVSEIVTERGVLPVSPDSKVIIALGTIESARLALTSFGTDGKIGRNLIAHLRSNVDF RVPRAALAALPPAVKALEASALFVKGRHEFKKADGSADGFAHFHFQITASGLGTNGTNSEAELFKKIPDIDLFDAHKNAT DTHVVITIRGIGEMEPKNDSDFGSSVTLDLDPQQKDEFQARRAFVNLQPSSRDYELWDAMDKASDEVAKVFANGQKIDVI KNGNVIVTNIDPSSLATVLPYKFSDQAGRGRRDGLGTTHHEAGTLRMGEDPNKSVTDPDCRFHNVTNTYVAGPALFPTMG SPNPMLTGIALVRRLGDHLMPEPPLLVSEPGFTYLFDGSDAQFANWEMAGGGSFSRFGRTIIAQQNEKGMGLLFYKPKPF EDFTLRLDFLLPHPRGNGNDNSGVFVRFRDSRLPDPAPDPVDPADNAAFVAVHTGFEIQIDEEARGDTRFGEPDGSFFAR TGAIYKIKSLGTGEGQQNYQNNISLAARQWHHYEIEVKKQDYVVRLNGQEVTRFKRSPSDTARGNPPSVDPNSGYIGLQT HTGNVAFANVRINA
Sequences:
>Translated_894_residues MPLIAPDYNTAFTRDVLGRYDCNTFDEALVTIDPNARAAAGLPGRGDLRPFDFIIIGGGTFGAAIAEHLWFRSTQRSERI LVLEAGPFLLPEHVQNLPMLGLDTAGARKDHSLQGEVWGLAWNSSDPFGFPGLAYCLGGRSIYWGGWLPRLLDAEMPKDV WPKGVLDDLTAKVLPDGRKGYFRQSSDQIGVTETNDFIFGDLHRAMRQQLFGALSSIPDVYDLALLPDHPAVYYGNTPVT INDLAKLLGIDKLPSPPPSIQKLRDEAKLEAPLAVQGQVGHAGFFPFNKFSAVPLLMKAAREASTQTPFDGVINRLDDVK KRLMVVERCHVTQLNTVNTEGGRRVSEIVTERGVLPVSPDSKVIIALGTIESARLALTSFGTDGKIGRNLIAHLRSNVDF RVPRAALAALPPAVKALEASALFVKGRHEFKKADGSADGFAHFHFQITASGLGTNGTNSEAELFKKIPDIDLFDAHKNAT DTHVVITIRGIGEMEPKNDSDFGSSVTLDLDPQQKDEFQARRAFVNLQPSSRDYELWDAMDKASDEVAKVFANGQKIDVI KNGNVIVTNIDPSSLATVLPYKFSDQAGRGRRDGLGTTHHEAGTLRMGEDPNKSVTDPDCRFHNVTNTYVAGPALFPTMG SPNPMLTGIALVRRLGDHLMPEPPLLVSEPGFTYLFDGSDAQFANWEMAGGGSFSRFGRTIIAQQNEKGMGLLFYKPKPF EDFTLRLDFLLPHPRGNGNDNSGVFVRFRDSRLPDPAPDPVDPADNAAFVAVHTGFEIQIDEEARGDTRFGEPDGSFFAR TGAIYKIKSLGTGEGQQNYQNNISLAARQWHHYEIEVKKQDYVVRLNGQEVTRFKRSPSDTARGNPPSVDPNSGYIGLQT HTGNVAFANVRINA >Mature_893_residues PLIAPDYNTAFTRDVLGRYDCNTFDEALVTIDPNARAAAGLPGRGDLRPFDFIIIGGGTFGAAIAEHLWFRSTQRSERIL VLEAGPFLLPEHVQNLPMLGLDTAGARKDHSLQGEVWGLAWNSSDPFGFPGLAYCLGGRSIYWGGWLPRLLDAEMPKDVW PKGVLDDLTAKVLPDGRKGYFRQSSDQIGVTETNDFIFGDLHRAMRQQLFGALSSIPDVYDLALLPDHPAVYYGNTPVTI NDLAKLLGIDKLPSPPPSIQKLRDEAKLEAPLAVQGQVGHAGFFPFNKFSAVPLLMKAAREASTQTPFDGVINRLDDVKK RLMVVERCHVTQLNTVNTEGGRRVSEIVTERGVLPVSPDSKVIIALGTIESARLALTSFGTDGKIGRNLIAHLRSNVDFR VPRAALAALPPAVKALEASALFVKGRHEFKKADGSADGFAHFHFQITASGLGTNGTNSEAELFKKIPDIDLFDAHKNATD THVVITIRGIGEMEPKNDSDFGSSVTLDLDPQQKDEFQARRAFVNLQPSSRDYELWDAMDKASDEVAKVFANGQKIDVIK NGNVIVTNIDPSSLATVLPYKFSDQAGRGRRDGLGTTHHEAGTLRMGEDPNKSVTDPDCRFHNVTNTYVAGPALFPTMGS PNPMLTGIALVRRLGDHLMPEPPLLVSEPGFTYLFDGSDAQFANWEMAGGGSFSRFGRTIIAQQNEKGMGLLFYKPKPFE DFTLRLDFLLPHPRGNGNDNSGVFVRFRDSRLPDPAPDPVDPADNAAFVAVHTGFEIQIDEEARGDTRFGEPDGSFFART GAIYKIKSLGTGEGQQNYQNNISLAARQWHHYEIEVKKQDYVVRLNGQEVTRFKRSPSDTARGNPPSVDPNSGYIGLQTH TGNVAFANVRINA
Specific function: Unknown
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97888; Mature: 97757
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIAPDYNTAFTRDVLGRYDCNTFDEALVTIDPNARAAAGLPGRGDLRPFDFIIIGGGT CCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEECCCH FGAAIAEHLWFRSTQRSERILVLEAGPFLLPEHVQNLPMLGLDTAGARKDHSLQGEVWGL HHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCEEECCCCCCCCCCCCCCEEEEE AWNSSDPFGFPGLAYCLGGRSIYWGGWLPRLLDAEMPKDVWPKGVLDDLTAKVLPDGRKG EECCCCCCCCCHHHHHHCCCEEEECCCCHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCCC YFRQSSDQIGVTETNDFIFGDLHRAMRQQLFGALSSIPDVYDLALLPDHPAVYYGNTPVT CCCCCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCEE INDLAKLLGIDKLPSPPPSIQKLRDEAKLEAPLAVQGQVGHAGFFPFNKFSAVPLLMKAA HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH REASTQTPFDGVINRLDDVKKRLMVVERCHVTQLNTVNTEGGRRVSEIVTERGVLPVSPD HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCEECCCC SKVIIALGTIESARLALTSFGTDGKIGRNLIAHLRSNVDFRVPRAALAALPPAVKALEAS CCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEECCHHHHHHCCHHHHHHCCC ALFVKGRHEFKKADGSADGFAHFHFQITASGLGTNGTNSEAELFKKIPDIDLFDAHKNAT EEEEECCHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCCCC DTHVVITIRGIGEMEPKNDSDFGSSVTLDLDPQQKDEFQARRAFVNLQPSSRDYELWDAM CCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHEEEEECCCCCCCHHHHHH DKASDEVAKVFANGQKIDVIKNGNVIVTNIDPSSLATVLPYKFSDQAGRGRRDGLGTTHH HHHHHHHHHHHCCCCEEEEEECCCEEEEECCHHHHHEECCEECCCCCCCCCCCCCCCCCC EAGTLRMGEDPNKSVTDPDCRFHNVTNTYVAGPALFPTMGSPNPMLTGIALVRRLGDHLM CCCEEEECCCCCCCCCCCCCEEECCCCCEEECCEECCCCCCCCHHHHHHHHHHHHHHHHC PEPPLLVSEPGFTYLFDGSDAQFANWEMAGGGSFSRFGRTIIAQQNEKGMGLLFYKPKPF CCCCEEEECCCEEEEECCCCCCCCEEEECCCCCHHHHCCEEEEECCCCCCEEEEECCCCC EDFTLRLDFLLPHPRGNGNDNSGVFVRFRDSRLPDPAPDPVDPADNAAFVAVHTGFEIQI CCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE DEEARGDTRFGEPDGSFFARTGAIYKIKSLGTGEGQQNYQNNISLAARQWHHYEIEVKKQ CCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHCCCEEEEEEEEEEEEEEECC DYVVRLNGQEVTRFKRSPSDTARGNPPSVDPNSGYIGLQTHTGNVAFANVRINA CEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEC >Mature Secondary Structure PLIAPDYNTAFTRDVLGRYDCNTFDEALVTIDPNARAAAGLPGRGDLRPFDFIIIGGGT CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEECCCH FGAAIAEHLWFRSTQRSERILVLEAGPFLLPEHVQNLPMLGLDTAGARKDHSLQGEVWGL HHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCEEECCCCCCCCCCCCCCEEEEE AWNSSDPFGFPGLAYCLGGRSIYWGGWLPRLLDAEMPKDVWPKGVLDDLTAKVLPDGRKG EECCCCCCCCCHHHHHHCCCEEEECCCCHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCCC YFRQSSDQIGVTETNDFIFGDLHRAMRQQLFGALSSIPDVYDLALLPDHPAVYYGNTPVT CCCCCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCEE INDLAKLLGIDKLPSPPPSIQKLRDEAKLEAPLAVQGQVGHAGFFPFNKFSAVPLLMKAA HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH REASTQTPFDGVINRLDDVKKRLMVVERCHVTQLNTVNTEGGRRVSEIVTERGVLPVSPD HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCEECCCC SKVIIALGTIESARLALTSFGTDGKIGRNLIAHLRSNVDFRVPRAALAALPPAVKALEAS CCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEECCHHHHHHCCHHHHHHCCC ALFVKGRHEFKKADGSADGFAHFHFQITASGLGTNGTNSEAELFKKIPDIDLFDAHKNAT EEEEECCHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCCCC DTHVVITIRGIGEMEPKNDSDFGSSVTLDLDPQQKDEFQARRAFVNLQPSSRDYELWDAM CCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHEEEEECCCCCCCHHHHHH DKASDEVAKVFANGQKIDVIKNGNVIVTNIDPSSLATVLPYKFSDQAGRGRRDGLGTTHH HHHHHHHHHHHCCCCEEEEEECCCEEEEECCHHHHHEECCEECCCCCCCCCCCCCCCCCC EAGTLRMGEDPNKSVTDPDCRFHNVTNTYVAGPALFPTMGSPNPMLTGIALVRRLGDHLM CCCEEEECCCCCCCCCCCCCEEECCCCCEEECCEECCCCCCCCHHHHHHHHHHHHHHHHC PEPPLLVSEPGFTYLFDGSDAQFANWEMAGGGSFSRFGRTIIAQQNEKGMGLLFYKPKPF CCCCEEEECCCEEEEECCCCCCCCEEEECCCCCHHHHCCEEEEECCCCCCEEEEECCCCC EDFTLRLDFLLPHPRGNGNDNSGVFVRFRDSRLPDPAPDPVDPADNAAFVAVHTGFEIQI CCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE DEEARGDTRFGEPDGSFFARTGAIYKIKSLGTGEGQQNYQNNISLAARQWHHYEIEVKKQ CCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHCCCEEEEEEEEEEEEEEECC DYVVRLNGQEVTRFKRSPSDTARGNPPSVDPNSGYIGLQTHTGNVAFANVRINA CEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA