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The map label for this gene is xcpR [H]

Identifier: 82703024

GI number: 82703024

Start: 2192118

End: 2193581

Strand: Direct

Name: xcpR [H]

Synonym: Nmul_A1903

Alternate gene names: 82703024

Gene position: 2192118-2193581 (Clockwise)

Preceding gene: 82703023

Following gene: 82703025

Centisome position: 68.84

GC content: 59.29

Gene sequence:

>1464_bases
ATGGCGTCTGACAGGATTCCTTATGTCTTTGTCAAGACAAATGGAGTGGCCGTGACGAGCGTCACGAGCGATCACGCAGA
GGTGGTGGTGCGCGGCGAAGTCCAGGCCGGGGCACTGGCGGAGTTGCGTCGCGTTCTGGGCGTGCCTCTGCGGGCGCGAC
GCCTCGCTACCGACGAGTTCAACGAGATCGTTGCGGTGCTGTATAACGGCGCAAACGAAGGCGCCGCCGCACTCGCAGAT
GATCTCGCACAGGATATAGACCTCTCGAGATTACTGCAGGAACTGCCGAAGGTCGAGGACCTGCTCGAAAGCCAGGATGA
TGCTCCTGTCATCCGGCTGATCAACGCGCTCTTTACACAGGCGTTACGCACCGCGGCTTCCGATATCCACATTGAGCCAT
ATGAAACACGCTCGGTTGTACGGTTGCGAGTGGACGGCACATTGCGCGACCTGATCGAACCGGCGCGCGCATTACATGCC
GCCCTCATCTCACGCATCAAGATCATGGCGCAGCTCGACATTGCGGAAAAACGCCTTCCGCAGGACGGCCGGATTACATT
GAGGATGGCAGGCAGGCCAGTCGACGTGCGCGTATCCACCATCCCCACCGCACACGGCGAACGCGCCGTATTGCGTTTGC
TGGACAAGCAGGCTGGCCGCCTGGACCTCCCTCGGCTTGGCATGGATGAAATCACCTTGACTCGCATGGACAGGCTTATT
CGCGAGCCCCATGGCATTATTCTCGTAACCGGCCCCACCGGATCGGGTAAAACAACCACGCTTTACGCCGCCCTGTCGAG
GCTGGATTCCGCGTCGCTCAACATCATGACGGTTGAGGACCCCATCGAGTACGATCTTGACGGCATCAGTCAGACTCAGG
TCAATCCGCGAATCGAAATGACGTTTGCGCGCGCCTTGCGGACAATCCTGCGGCAAGACCCGGATGTCATCATGATTGGA
GAGATTCGCGACCTCGAAACCGCACAGATCGCGGTGCAGGCCAGCCTTACGGGCCATCTGGTATTTGCGACTCTGCATAC
CAATGATGCGATAAGCGCCGTGACCCGGCTTGTCGACATGGGAGTCGAGCCGTTTCTGCTGGCATCGAGTCTCATCGGCG
TAGGTGCGCAGCGTCTGGTGCGGCGGCTCTGTCTGGAATGCCGCCAGCCCTGGGACGAGGCCATGGGAAAATCCCCGAGC
TCTTTTTCGGCTTCCGGAATTTTATACAAGGCGCAGGGCTGTGCGGCATGCAATCACTCCGGCTATCAGGGACGCACCGG
GATTTATGAGTTGCTCGCGGTTGACAACGACCTGCGCCGGAGAGTTCATGATCGCGCTTCCGAACAAGACCTGCGAGAAT
ATGTGATTTCCGCCGGAATGCGCTCGTTACGTGACGACGGCATGCGCCTCGCTACCCAGGGCATCACCAGCCTGGAGGAA
GTCGTGCGTGTAACACGCGAATAG

Upstream 100 bases:

>100_bases
TGACAGCATCACTCCCGATGATCCCGGAATTTCCAATGTTCAAGGCAACTGGGATACCGGGGGAGTGATGGATAATACAC
CCTGAAACCGGGCCGCAATC

Downstream 100 bases:

>100_bases
CAGTTCCATATGGAAGCGTACCGCTACGAAGCGCTTGATCCCGAAGGCCGCAAGGTAACGGGTGTGCTGCAGGCTGATAC
CGCGCGCCAGGCGCGGGCAC

Product: type II secretion system protein E

Products: NA

Alternate protein names: Type II traffic warden ATPase [H]

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MASDRIPYVFVKTNGVAVTSVTSDHAEVVVRGEVQAGALAELRRVLGVPLRARRLATDEFNEIVAVLYNGANEGAAALAD
DLAQDIDLSRLLQELPKVEDLLESQDDAPVIRLINALFTQALRTAASDIHIEPYETRSVVRLRVDGTLRDLIEPARALHA
ALISRIKIMAQLDIAEKRLPQDGRITLRMAGRPVDVRVSTIPTAHGERAVLRLLDKQAGRLDLPRLGMDEITLTRMDRLI
REPHGIILVTGPTGSGKTTTLYAALSRLDSASLNIMTVEDPIEYDLDGISQTQVNPRIEMTFARALRTILRQDPDVIMIG
EIRDLETAQIAVQASLTGHLVFATLHTNDAISAVTRLVDMGVEPFLLASSLIGVGAQRLVRRLCLECRQPWDEAMGKSPS
SFSASGILYKAQGCAACNHSGYQGRTGIYELLAVDNDLRRRVHDRASEQDLREYVISAGMRSLRDDGMRLATQGITSLEE
VVRVTRE

Sequences:

>Translated_487_residues
MASDRIPYVFVKTNGVAVTSVTSDHAEVVVRGEVQAGALAELRRVLGVPLRARRLATDEFNEIVAVLYNGANEGAAALAD
DLAQDIDLSRLLQELPKVEDLLESQDDAPVIRLINALFTQALRTAASDIHIEPYETRSVVRLRVDGTLRDLIEPARALHA
ALISRIKIMAQLDIAEKRLPQDGRITLRMAGRPVDVRVSTIPTAHGERAVLRLLDKQAGRLDLPRLGMDEITLTRMDRLI
REPHGIILVTGPTGSGKTTTLYAALSRLDSASLNIMTVEDPIEYDLDGISQTQVNPRIEMTFARALRTILRQDPDVIMIG
EIRDLETAQIAVQASLTGHLVFATLHTNDAISAVTRLVDMGVEPFLLASSLIGVGAQRLVRRLCLECRQPWDEAMGKSPS
SFSASGILYKAQGCAACNHSGYQGRTGIYELLAVDNDLRRRVHDRASEQDLREYVISAGMRSLRDDGMRLATQGITSLEE
VVRVTRE
>Mature_486_residues
ASDRIPYVFVKTNGVAVTSVTSDHAEVVVRGEVQAGALAELRRVLGVPLRARRLATDEFNEIVAVLYNGANEGAAALADD
LAQDIDLSRLLQELPKVEDLLESQDDAPVIRLINALFTQALRTAASDIHIEPYETRSVVRLRVDGTLRDLIEPARALHAA
LISRIKIMAQLDIAEKRLPQDGRITLRMAGRPVDVRVSTIPTAHGERAVLRLLDKQAGRLDLPRLGMDEITLTRMDRLIR
EPHGIILVTGPTGSGKTTTLYAALSRLDSASLNIMTVEDPIEYDLDGISQTQVNPRIEMTFARALRTILRQDPDVIMIGE
IRDLETAQIAVQASLTGHLVFATLHTNDAISAVTRLVDMGVEPFLLASSLIGVGAQRLVRRLCLECRQPWDEAMGKSPSS
FSASGILYKAQGCAACNHSGYQGRTGIYELLAVDNDLRRRVHDRASEQDLREYVISAGMRSLRDDGMRLATQGITSLEEV
VRVTRE

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=464, Percent_Identity=51.5086206896552, Blast_Score=451, Evalue=1e-128,
Organism=Escherichia coli, GI1786296, Length=396, Percent_Identity=43.6868686868687, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI87082188, Length=169, Percent_Identity=45.5621301775148, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013369
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 53527; Mature: 53396

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDRIPYVFVKTNGVAVTSVTSDHAEVVVRGEVQAGALAELRRVLGVPLRARRLATDEF
CCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHH
NEIVAVLYNGANEGAAALADDLAQDIDLSRLLQELPKVEDLLESQDDAPVIRLINALFTQ
HHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHH
ALRTAASDIHIEPYETRSVVRLRVDGTLRDLIEPARALHAALISRIKIMAQLDIAEKRLP
HHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QDGRITLRMAGRPVDVRVSTIPTAHGERAVLRLLDKQAGRLDLPRLGMDEITLTRMDRLI
CCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
REPHGIILVTGPTGSGKTTTLYAALSRLDSASLNIMTVEDPIEYDLDGISQTQVNPRIEM
HCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHH
TFARALRTILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVFATLHTNDAISAVTRLVDM
HHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEECCCEEEEEEEECCHHHHHHHHHHHC
GVEPFLLASSLIGVGAQRLVRRLCLECRQPWDEAMGKSPSSFSASGILYKAQGCAACNHS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCC
GYQGRTGIYELLAVDNDLRRRVHDRASEQDLREYVISAGMRSLRDDGMRLATQGITSLEE
CCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VVRVTRE
HHHHHCC
>Mature Secondary Structure 
ASDRIPYVFVKTNGVAVTSVTSDHAEVVVRGEVQAGALAELRRVLGVPLRARRLATDEF
CCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHH
NEIVAVLYNGANEGAAALADDLAQDIDLSRLLQELPKVEDLLESQDDAPVIRLINALFTQ
HHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHH
ALRTAASDIHIEPYETRSVVRLRVDGTLRDLIEPARALHAALISRIKIMAQLDIAEKRLP
HHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QDGRITLRMAGRPVDVRVSTIPTAHGERAVLRLLDKQAGRLDLPRLGMDEITLTRMDRLI
CCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
REPHGIILVTGPTGSGKTTTLYAALSRLDSASLNIMTVEDPIEYDLDGISQTQVNPRIEM
HCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHH
TFARALRTILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVFATLHTNDAISAVTRLVDM
HHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEECCCEEEEEEEECCHHHHHHHHHHHC
GVEPFLLASSLIGVGAQRLVRRLCLECRQPWDEAMGKSPSSFSASGILYKAQGCAACNHS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCC
GYQGRTGIYELLAVDNDLRRRVHDRASEQDLREYVISAGMRSLRDDGMRLATQGITSLEE
CCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VVRVTRE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]