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The map label for this gene is pfyP [H]

Identifier: 82702910

GI number: 82702910

Start: 2039379

End: 2039837

Strand: Reverse

Name: pfyP [H]

Synonym: Nmul_A1787

Alternate gene names: 82702910

Gene position: 2039837-2039379 (Counterclockwise)

Preceding gene: 82702911

Following gene: 82702909

Centisome position: 64.06

GC content: 45.53

Gene sequence:

>459_bases
ATGCTTTTCATTGATGATAAAGATCCTGGGTTAATTCCCCGAGTTCTCTGCACCATACTCGATTCTTGTGTCAATGGAGT
GACCTTGGCGGATCCTGATATGGAAGATTTGCCCCTCGTCTATGCAAATAAGGCGTTTGCAGACATGACGGGATATACCC
AGGAAGAAACTATCGGAAAGAATTGCCGGTTTTTGCAAGGTACAGACCGGGAACAGGAAGAGAGATCGCAAATCCGGACG
GCGATAACAAACAAGGAGCCGATCGAAGTCACCCTCAGAAATTATCGTAAAAACGGAGAGCTATTTTACAATCATCTGAA
AATTATCCCCCTGTTCGACTCGCAAGGAAAGGTTCTCTACTATTTAGGGGTTCAGTACGATATAACCACTCAGGTTCTGA
AAGAAAAGGAGATCGAACGGCTGAGCGGACGCCTTGCCTCGCTCAAGAATAGCTTCTAA

Upstream 100 bases:

>100_bases
TAAAAAGACTGGTGGAAGCGCGTTGTTAATATTCCTGCCGCTCACTGCCCATTGGACTGGGCTTTAATATGAGTGGCGGG
GGACAAGATAGGAGGCCCCG

Downstream 100 bases:

>100_bases
TCTTGAAACCAGATGACAATGGATTGCCCGCTCGATACCCCGTACCGTACTAGCCACTCCACTCCGAACTAAAGCAAATC
CATAAGCTGAACCATAAGCT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Photoactive flavo-yellow protein; Phototropin homolog [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MLFIDDKDPGLIPRVLCTILDSCVNGVTLADPDMEDLPLVYANKAFADMTGYTQEETIGKNCRFLQGTDREQEERSQIRT
AITNKEPIEVTLRNYRKNGELFYNHLKIIPLFDSQGKVLYYLGVQYDITTQVLKEKEIERLSGRLASLKNSF

Sequences:

>Translated_152_residues
MLFIDDKDPGLIPRVLCTILDSCVNGVTLADPDMEDLPLVYANKAFADMTGYTQEETIGKNCRFLQGTDREQEERSQIRT
AITNKEPIEVTLRNYRKNGELFYNHLKIIPLFDSQGKVLYYLGVQYDITTQVLKEKEIERLSGRLASLKNSF
>Mature_152_residues
MLFIDDKDPGLIPRVLCTILDSCVNGVTLADPDMEDLPLVYANKAFADMTGYTQEETIGKNCRFLQGTDREQEERSQIRT
AITNKEPIEVTLRNYRKNGELFYNHLKIIPLFDSQGKVLYYLGVQYDITTQVLKEKEIERLSGRLASLKNSF

Specific function: Exhibits the same spectroscopical features and blue- light induced photochemistry as plants phototropins, with the reversible formation of a blue-shifted photoproduct, assigned to an FMN-cysteine thiol adduct. Although it is a positive regulator in the ac

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Drosophila melanogaster, GI17136946, Length=126, Percent_Identity=26.984126984127, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR002645 [H]

Pfam domain/function: PF00989 PAS; PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 17428; Mature: 17428

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIDDKDPGLIPRVLCTILDSCVNGVTLADPDMEDLPLVYANKAFADMTGYTQEETIGK
CEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCHHHHHCCCCCHHHCCC
NCRFLQGTDREQEERSQIRTAITNKEPIEVTLRNYRKNGELFYNHLKIIPLFDSQGKVLY
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEE
YLGVQYDITTQVLKEKEIERLSGRLASLKNSF
EEECEECHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFIDDKDPGLIPRVLCTILDSCVNGVTLADPDMEDLPLVYANKAFADMTGYTQEETIGK
CEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCHHHHHCCCCCHHHCCC
NCRFLQGTDREQEERSQIRTAITNKEPIEVTLRNYRKNGELFYNHLKIIPLFDSQGKVLY
CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEE
YLGVQYDITTQVLKEKEIERLSGRLASLKNSF
EEECEECHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 11157946; 11964249 [H]