Click here to switch to the map view.

The map label for this gene is blc [H]

Identifier: 82702909

GI number: 82702909

Start: 2038670

End: 2039176

Strand: Reverse

Name: blc [H]

Synonym: Nmul_A1786

Alternate gene names: 82702909

Gene position: 2039176-2038670 (Counterclockwise)

Preceding gene: 82702910

Following gene: 82702906

Centisome position: 64.04

GC content: 48.52

Gene sequence:

>507_bases
ATGCTTGCGGCGTGCGGAGGAATCCCAAAAGGAGTTACTCCAGTCACAGACTTTGACATCGGTCGCTATCAAGGAGTTTG
GTACGAAATTGCTCGGCTCGAGCATTCCTTCGAAAGTGGCTTAAGTGACGTAACAGCAAGCTACGGTTCGCGCGATGACG
GAGGCATTGACGTAGTAAACCGCGGGTGTGATGTCGAGAAAGGCAAGTGGCGCGTAGCAAAGGGGAGAGCTTACCCCGCA
ACAACAGCGGACATTGGATATCTCAAGGTTTCCTTTTTTGGTCCTTTCTATGCCTCGTATGTGGTGTTTGATCTGGATAA
GGCCGCCTATCAGTATTCGTTTGTGACTGGACCGGATCGAAACTACCTTTGGCTTCTGGCGAGAACTCCTCATGTCCAAG
AGGAAGTTTTGAAAAAATTCATCAGAGAGTCAAATAAGCTGGGTTTTAATACAGAGAAGCTTATTTTTGTTAAACATCAT
TCCGCGCCCTGCAACGCGGCAGGATGA

Upstream 100 bases:

>100_bases
ATGGAAAATCGATCTGTTGAAAACGCTGCTGCCCGAGGGACGATTGTTACAAATCTTTTTGAACGTGAAGAAAATATCAT
TAGCTTGGGTAATAGCAGCG

Downstream 100 bases:

>100_bases
CTTAAATAAAGCACAGGGAATTGAAGGCGCGACCATTCGGCATCGCCTGCACATTGTCATCGCTGTTTGAGTATTTGTGC
GAGAAAAATGCGGGGACGCG

Product: lipoprotein Blc

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLAACGGIPKGVTPVTDFDIGRYQGVWYEIARLEHSFESGLSDVTASYGSRDDGGIDVVNRGCDVEKGKWRVAKGRAYPA
TTADIGYLKVSFFGPFYASYVVFDLDKAAYQYSFVTGPDRNYLWLLARTPHVQEEVLKKFIRESNKLGFNTEKLIFVKHH
SAPCNAAG

Sequences:

>Translated_168_residues
MLAACGGIPKGVTPVTDFDIGRYQGVWYEIARLEHSFESGLSDVTASYGSRDDGGIDVVNRGCDVEKGKWRVAKGRAYPA
TTADIGYLKVSFFGPFYASYVVFDLDKAAYQYSFVTGPDRNYLWLLARTPHVQEEVLKKFIRESNKLGFNTEKLIFVKHH
SAPCNAAG
>Mature_168_residues
MLAACGGIPKGVTPVTDFDIGRYQGVWYEIARLEHSFESGLSDVTASYGSRDDGGIDVVNRGCDVEKGKWRVAKGRAYPA
TTADIGYLKVSFFGPFYASYVVFDLDKAAYQYSFVTGPDRNYLWLLARTPHVQEEVLKKFIRESNKLGFNTEKLIFVKHH
SAPCNAAG

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=161, Percent_Identity=45.9627329192547, Blast_Score=157, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 18658; Mature: 18658

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAACGGIPKGVTPVTDFDIGRYQGVWYEIARLEHSFESGLSDVTASYGSRDDGGIDVVN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEE
RGCDVEKGKWRVAKGRAYPATTADIGYLKVSFFGPFYASYVVFDLDKAAYQYSFVTGPDR
CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCHHHHHEEEEECCCHHEEEEEEECCCC
NYLWLLARTPHVQEEVLKKFIRESNKLGFNTEKLIFVKHHSAPCNAAG
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MLAACGGIPKGVTPVTDFDIGRYQGVWYEIARLEHSFESGLSDVTASYGSRDDGGIDVVN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEE
RGCDVEKGKWRVAKGRAYPATTADIGYLKVSFFGPFYASYVVFDLDKAAYQYSFVTGPDR
CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCHHHHHEEEEECCCHHEEEEEEECCCC
NYLWLLARTPHVQEEVLKKFIRESNKLGFNTEKLIFVKHHSAPCNAAG
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]