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The map label for this gene is 82546089

Identifier: 82546089

GI number: 82546089

Start: 3752653

End: 3753195

Strand: Reverse

Name: 82546089

Synonym: SBO_3736

Alternate gene names: NA

Gene position: 3753195-3752653 (Counterclockwise)

Preceding gene: 82546090

Following gene: 161984823

Centisome position: 83.04

GC content: 51.01

Gene sequence:

>543_bases
ATGTACCAGCTAAAGATAACCATCCGAGACAGCAAACCACCTATATGGCGGCGTGTGCTGGTTCCAGAGCAAATCCCCTT
TAGTGAACTTCACGCGGTGATCCAGTTGGCTTTTGGCTGGAATGACGAACACCTGTATATGTTCGAGAAAGGGCGTAAAG
GTGATCCCGGTAGCGAGTATCGCGTATGGGGTGAGGATGAAAGCATGGGTAATGCGGCAATCACACCACTATGGGCAGCG
CTCCAGAATGATGGTGACAAGCTGGTTTACACGTATGACTTTGGCGACTGGTGGGATTGCGTCATTGTGCTGGAGAAGCA
AACACACGATACGAGCAATCAGCCCATTAGCTGCCTGCGTGGGAAAGGCACCACCCCGGTGGAAAACTCAGGCGGCTTGC
ATGGTTACAATGAATTGCTATTACAGGCCAGAGAGTCTGATAATCCTGAGCAGGCCGAGATCCACAATTTCCTGATGCTG
GATATTGAGCGCCGGGTTTACGACCTGAGCAGCATCAACGACAGATTGCAGACTCTTAACTGA

Upstream 100 bases:

>100_bases
TAACTTATGCGTATTAAGCAAATTTCCTTTATTCACCTTTACAGAATTGTGAGTACGTCAGTATCGTTATCCTTCCGATT
CGCATTTATTCAGGATTTGC

Downstream 100 bases:

>100_bases
CCCGCATATATTCGCCTGATATTGCGTTATCAGCGCCGCCAGTATCGCGCATAACAGCGCACTGACCGGGCAAACCGTAG
CGCACGACCGTTGCGTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEHLYMFEKGRKGDPGSEYRVWGEDESMGNAAITPLWAA
LQNDGDKLVYTYDFGDWWDCVIVLEKQTHDTSNQPISCLRGKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLML
DIERRVYDLSSINDRLQTLN

Sequences:

>Translated_180_residues
MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEHLYMFEKGRKGDPGSEYRVWGEDESMGNAAITPLWAA
LQNDGDKLVYTYDFGDWWDCVIVLEKQTHDTSNQPISCLRGKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLML
DIERRVYDLSSINDRLQTLN
>Mature_180_residues
MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEHLYMFEKGRKGDPGSEYRVWGEDESMGNAAITPLWAA
LQNDGDKLVYTYDFGDWWDCVIVLEKQTHDTSNQPISCLRGKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLML
DIERRVYDLSSINDRLQTLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 20754; Mature: 20754

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEHLYMFEKGRKGDPGSEY
CEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCE
RVWGEDESMGNAAITPLWAALQNDGDKLVYTYDFGDWWDCVIVLEKQTHDTSNQPISCLR
EEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEC
GKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLMLDIERRVYDLSSINDRLQTLN
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHEEEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEHLYMFEKGRKGDPGSEY
CEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCE
RVWGEDESMGNAAITPLWAALQNDGDKLVYTYDFGDWWDCVIVLEKQTHDTSNQPISCLR
EEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEC
GKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLMLDIERRVYDLSSINDRLQTLN
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHEEEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]