Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is 82546090
Identifier: 82546090
GI number: 82546090
Start: 3753733
End: 3754344
Strand: Reverse
Name: 82546090
Synonym: SBO_3737
Alternate gene names: NA
Gene position: 3754344-3753733 (Counterclockwise)
Preceding gene: 82546091
Following gene: 82546089
Centisome position: 83.06
GC content: 54.74
Gene sequence:
>612_bases GTGAGAGACAGAACGCGCAGCTATACCACCGACCTGCCCCGTATAGGGTTGCCATTCCTTGCGAACATGCGTAGCAGGCT GGCGGATGCTGAACCGGGTACGCAGCTTTATACCCAGACCGAAAGCGGAACGTTGTATGCCTTCCGGCAAGCCGACAGCT ACGCCATGACAATCAACGGCGTGACGCGGGCTATTCGCACCACAACCACGAAGGCCGGGTATGGCGTCCGGGAATGGTAC GCTTGCCCCCACTGTATGAAGCGGGCTGCAAAGCTGTATATCGGCAAGAAAGACATTGGCTGCCGGGCGTGCTGGAAACT TCACTATAAAAGCCAGAGTGCCGACATACTGGACAGGATGCGCATGAAGATACGCCAGCAGCGATGCGCGATATGGGGCA GCAATGACCTTGCCAATAATCTGTTTAATGACATTCGCATGTTCCCAAAACCAAAGGGGATGCGCTGGGCTACGTTTGAC AGGAAGCGGGCAGAGTTATCAGTTATGGAGATGGCTTACTGGCAGGCATTCAGCCCGGTAGTGGACAGAATCACGGGCGT TATTGAGCGTAAAGCAGGAAAAGCAGCCAGAGGCATTGGCCTGACTCTATAA
Upstream 100 bases:
>100_bases AAAATTGGTGCGCAATTTACAGTAAAATACGCATATTATTTCGTATTCAATTTGCGCACCGTTCGCAGTTAATGCGCAGT AATTCGCAGGAGGCCAGCCA
Downstream 100 bases:
>100_bases AAGCAAAACGCCCGCACGGGGCGTCAGAGAACGGGATAGACTTCTGCGACAATTTGCATTCGCCGCCAATATAGCAAGCC GTCCACATCAAGCAATAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGTLYAFRQADSYAMTINGVTRAIRTTTTKAGYGVREWY ACPHCMKRAAKLYIGKKDIGCRACWKLHYKSQSADILDRMRMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFD RKRAELSVMEMAYWQAFSPVVDRITGVIERKAGKAARGIGLTL
Sequences:
>Translated_203_residues MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGTLYAFRQADSYAMTINGVTRAIRTTTTKAGYGVREWY ACPHCMKRAAKLYIGKKDIGCRACWKLHYKSQSADILDRMRMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFD RKRAELSVMEMAYWQAFSPVVDRITGVIERKAGKAARGIGLTL >Mature_203_residues MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGTLYAFRQADSYAMTINGVTRAIRTTTTKAGYGVREWY ACPHCMKRAAKLYIGKKDIGCRACWKLHYKSQSADILDRMRMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFD RKRAELSVMEMAYWQAFSPVVDRITGVIERKAGKAARGIGLTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23264; Mature: 23264
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGTLYAFRQADSYAMTING CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCEEEEEHH VTRAIRTTTTKAGYGVREWYACPHCMKRAAKLYIGKKDIGCRACWKLHYKSQSADILDRM HHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHH RMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFDRKRAELSVMEMAYWQAFSPV HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH VDRITGVIERKAGKAARGIGLTL HHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGTLYAFRQADSYAMTING CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCEEEEEHH VTRAIRTTTTKAGYGVREWYACPHCMKRAAKLYIGKKDIGCRACWKLHYKSQSADILDRM HHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHH RMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFDRKRAELSVMEMAYWQAFSPV HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH VDRITGVIERKAGKAARGIGLTL HHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA