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The map label for this gene is 82546040

Identifier: 82546040

GI number: 82546040

Start: 3696417

End: 3697646

Strand: Reverse

Name: 82546040

Synonym: SBO_3681

Alternate gene names: NA

Gene position: 3697646-3696417 (Counterclockwise)

Preceding gene: 161984828

Following gene: 82546033

Centisome position: 81.81

GC content: 57.56

Gene sequence:

>1230_bases
ATGTTGTCCGCTTTTACTCCCCGCCCGCTGAAACGTCTGTTCACGGCCAACCAGTGCTGGACATCCTTCCTGGATGCGGG
CGGTCTGCGCGATATCGGGGTTGAGGCTGTCACAAAAATGCTGGCCTGCGGCACGCGGATACTGGGAGTGAAGGAATACA
TCTGCGATAAACCTGAGTGCCCCCACGTCAGATACGTCACTAACTCATGCGGCAGCCGTGCCTGCCCGTCCTGCGGAAAA
AAGGCCACAGACCTGTGGATAGCGACACAGCTGAATCGTCTTCCTGACTGCGACTGGGTACACCTGGTCTTCACCCTGCC
GGACACGCTGTGGCCGGTGTTCGAAAGCAACCGGTGGCTGCTGAATGACGTGTGCCGTCTGGCGGTGGAGAATCTGCTGT
ATGCCGCCCGGAAACGGGGGCAGGAACCCGGTATCTTCTGCGCCATCCACACGTATGGCCGTCGTCTCAACTGGCATCCG
CATGTACATGTGTCTGTAACCTGTGGAGGTCTGAATAAGCATGGTCAGTGGAAAAAGCTGAGCTTCCTGAAAGACGCGAT
GCGTTCACGGTGGATGTGGAATATGCGGCAGCTGCTTCTGAAAGCGTGGTCAGAGGGGCTGGCGATGCCGGAGTCGTTGT
CACATATCACGACGGAATCACAGTGGAGAAGCCTGGTGCTGAAAGCCGGAGGAAAATACTGGCATGTGTACATGTCGAAA
AAAACGGCCGGCGGGAGGAATACGGCGCGCTACCTGGGTCGTTATCTGAAGAAGCCGCCGATAGCGGCCTCCCGGCTGGC
ACATTACAACGGAGGGGCGAGCCTGAACTTCCGTTACCTGGACCACAAAACGGGAGAAACGGCGACGGAAACGCTGACAC
AGCGTGAGCTGGTCGCGAGGCTGAAACAGCACATCCCGGAGAAGTTTTTTAAGATGGTGAGGTACTTCGGGTTCCTTGCC
AACCGGGTGTGTGGAGAGAAGCTGCCGCAGGTGTACCGTGCTCTGGGGATGGATAAACCGGAACCAGTGGCGAAAGTGTG
CTATGCACAAATGGTGAAACAGTTCCTGAGTCGTGACCCGTTCGAATGCGTGCTGTGTGGCGGCCGGATGGTATACCGCC
GGGCCATTGCGGGGCTGAATGTGGAGGGGCTACGCGCGGGATATCAGTCTGCTGAGGTATATGCCGGCCTGACACAGGCT
AAGTGTGCCCGGGAATCGGTGCAAGTATAA

Upstream 100 bases:

>100_bases
GGACCCACCACCTGCGATGGTCGCGGCCTCCATCCTGGAGCGCCGTGGCGACACAGCAGCCCTTACCCGGCTACAGGATA
CCGGGGGTTAATCCGTCCTC

Downstream 100 bases:

>100_bases
AAAACAGCCTGTTGCGGTATAAGAATCGACCATGCAGAGAGAGAAAACACCGGAGTGGAGGGAAAAGCAGAAAAGCTCAC
GTGGCATAAGGCGCGGACAG

Product: IS1294 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGK
KATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHP
HVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLA
NRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLRAGYQSAEVYAGLTQA
KCARESVQV

Sequences:

>Translated_409_residues
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGK
KATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHP
HVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLA
NRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLRAGYQSAEVYAGLTQA
KCARESVQV
>Mature_409_residues
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGK
KATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHP
HVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLA
NRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLRAGYQSAEVYAGLTQA
KCARESVQV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 46474; Mature: 46474

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPEC
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC
PHVRYVTNSCGSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWL
CCEEEHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHCCCCHH
LNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCCCCCCCHHHH
SFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVAR
CCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
LKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
FECVLCGGRMVYRRAIAGLNVEGLRAGYQSAEVYAGLTQAKCARESVQV
CEEEEECCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIGVEAVTKMLACGTRILGVKEYICDKPEC
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC
PHVRYVTNSCGSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWL
CCEEEHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHCCCCHH
LNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCCCCCCCHHHH
SFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
KTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLNFRYLDHKTGETATETLTQRELVAR
CCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
LKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
FECVLCGGRMVYRRAIAGLNVEGLRAGYQSAEVYAGLTQAKCARESVQV
CEEEEECCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1646375 [H]