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The map label for this gene is yidQ [H]

Identifier: 161984828

GI number: 161984828

Start: 3698972

End: 3699304

Strand: Reverse

Name: yidQ [H]

Synonym: SBO_3683

Alternate gene names: 161984828

Gene position: 3699304-3698972 (Counterclockwise)

Preceding gene: 82546046

Following gene: 82546040

Centisome position: 81.85

GC content: 53.15

Gene sequence:

>333_bases
ATGATAAGAAATGTGTTGTTAGCGTTCATGATATGCAGCGGAATGACATTACTCGGAGGATGCTCCAGCGTGATGTCCCA
TACCGGAGGGAAAGAAGGAACGTATCCCGGCACCCGCGCCAGCGCAACCATGATTGGCGACGATGAAACCAACTGGGGCA
CTAAGTCGCTGGCGATTCTCGATATGCCGTTTACCGCTGTGATGGACACGCTTTTACTGCCGTGGGATGTGTTCCGCAAA
GACAGCTCGGTGCGCTCACACGTTGAAAAAAGCGAAGCCAACGCGCAAGCCACCAATGCGGTTATTCCACCGGCCAGAAT
GCCTGATAACTGA

Upstream 100 bases:

>100_bases
GCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCAC
GATCAACAGATGAATTTATT

Downstream 100 bases:

>100_bases
TTTAGCGATCAGTTTCGGTGATCCACAGCTGGCCGCCTTCCATCCACGCCAGCCATTGACCATCCGGCGAGAAGACCACG
GCGTCCGCAGAAGGTGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRK
DSSVRSHVEKSEANAQATNAVIPPARMPDN

Sequences:

>Translated_110_residues
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRK
DSSVRSHVEKSEANAQATNAVIPPARMPDN
>Mature_110_residues
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRK
DSSVRSHVEKSEANAQATNAVIPPARMPDN

Specific function: Unknown

COG id: COG5645

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yceK [H]

Homologues:

Organism=Escherichia coli, GI87082317, Length=110, Percent_Identity=99.0909090909091, Blast_Score=226, Evalue=3e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010780 [H]

Pfam domain/function: PF07119 DUF1375 [H]

EC number: NA

Molecular weight: Translated: 11807; Mature: 11807

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAIL
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE
DMPFTAVMDTLLLPWDVFRKDSSVRSHVEKSEANAQATNAVIPPARMPDN
ECCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAIL
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE
DMPFTAVMDTLLLPWDVFRKDSSVRSHVEKSEANAQATNAVIPPARMPDN
ECCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]