Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
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Accession | NC_007577 |
Length | 1,709,204 |
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The map label for this gene is 78779690
Identifier: 78779690
GI number: 78779690
Start: 1215319
End: 1216392
Strand: Reverse
Name: 78779690
Synonym: PMT9312_1307
Alternate gene names: NA
Gene position: 1216392-1215319 (Counterclockwise)
Preceding gene: 78779691
Following gene: 78779679
Centisome position: 71.17
GC content: 24.49
Gene sequence:
>1074_bases ATGAAGATTCTATATTTAGCACCAGGGAATTCAATTCATAGTAAAAAATGGATTGAAAAAATTAAATCTCTTTATCCTAA TAATAATTACTTCTGGTTTTCTTATGAGAAATTTCAATACGAAATTAATAATGAAATTAGTATTTTTTCTATATCTGGTA AAAACAAATTTAGATTAATTAGAATTATAAAATGTATTTTTAAGATTAGAAAACTTCAGAAAAAAAACAATTTTGATCTA ATTCATATACATTCAGTAGGAACATATGGAATCTTCGCAATAATACCAATTTTATTTAATATTCCTTTCATTGTTACTCC TTGGGGTTCAGATATTATTTTTGGCTCTAGAAAGTTTATAAATACTTTAATAATGAAATTTATTTTTTTCAAGGCTAGTT TAATTACCTGTGATGCAATACATATATCCAAACTTATTTCGAAAATCTCTCCTATAGCTAATCCAAAAATAATTAATTTT GGAATTGATTCTTCTTTTTTTGTTGGATCAATATCTAATTATATAGATGAGAAATCAATAAATATCATTTCAACAAGAAA TCATGAACAAATTTATAATTTGGAGACTTTAATAAATACATCAAAAAATTTAAAAAATAATAATATAGATTTCGCACTAA CTATTGCTGGTTATGGATCTCAAACTGAAAAGTTAATCAAAAAGTCTAATGATTTAGGATTAATAAAAAAAGTTAGATTT ATAGGAAAATATGATTATGAGACTTTACCTGAACTCCTAAATAAGCATGATTTGTTTATCTCTACTTCTTTATCTGATGC TGGGATAGCTTCAAGCATAGCTGAAGCTATGGCTTGTCAAAAAATTGTAATAGTCTCCGATAGTGGAGAAAATAAATTAT GGATTTCTAATGGTTATAATGGCTTCTTATTTAAAACTGGATGTTCAAAAAGCTTATATAATACAATTATTAAAGCTATA GATAGAAAACATTTATGGAAAAAAATTGGAATTAGGGCTAGAGAAACAATATTAGAAAGAAATGATATTAGTAATGAAAT GAAGAAAATGGGTAAGCTGATGGATCTAGTTTAA
Upstream 100 bases:
>100_bases TGTATTTATGCATTTTGCAATTATTTGCAAGCCAATCAAAGAAACTTTAAAATATTTAAAGAGAATATTGGCTAATAGAT GCCATTACAAATAAGTTTTA
Downstream 100 bases:
>100_bases TTCATTTTGATTTTGCCATTCTTTAACTAATTCATTCAGGGTTTTTAAAATTTGATCTTTATTTCTTTCGTTAATCAATT TTTTTAAATTTTCTAATTTT
Product: glycosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKILYLAPGNSIHSKKWIEKIKSLYPNNNYFWFSYEKFQYEINNEISIFSISGKNKFRLIRIIKCIFKIRKLQKKNNFDL IHIHSVGTYGIFAIIPILFNIPFIVTPWGSDIIFGSRKFINTLIMKFIFFKASLITCDAIHISKLISKISPIANPKIINF GIDSSFFVGSISNYIDEKSINIISTRNHEQIYNLETLINTSKNLKNNNIDFALTIAGYGSQTEKLIKKSNDLGLIKKVRF IGKYDYETLPELLNKHDLFISTSLSDAGIASSIAEAMACQKIVIVSDSGENKLWISNGYNGFLFKTGCSKSLYNTIIKAI DRKHLWKKIGIRARETILERNDISNEMKKMGKLMDLV
Sequences:
>Translated_357_residues MKILYLAPGNSIHSKKWIEKIKSLYPNNNYFWFSYEKFQYEINNEISIFSISGKNKFRLIRIIKCIFKIRKLQKKNNFDL IHIHSVGTYGIFAIIPILFNIPFIVTPWGSDIIFGSRKFINTLIMKFIFFKASLITCDAIHISKLISKISPIANPKIINF GIDSSFFVGSISNYIDEKSINIISTRNHEQIYNLETLINTSKNLKNNNIDFALTIAGYGSQTEKLIKKSNDLGLIKKVRF IGKYDYETLPELLNKHDLFISTSLSDAGIASSIAEAMACQKIVIVSDSGENKLWISNGYNGFLFKTGCSKSLYNTIIKAI DRKHLWKKIGIRARETILERNDISNEMKKMGKLMDLV >Mature_357_residues MKILYLAPGNSIHSKKWIEKIKSLYPNNNYFWFSYEKFQYEINNEISIFSISGKNKFRLIRIIKCIFKIRKLQKKNNFDL IHIHSVGTYGIFAIIPILFNIPFIVTPWGSDIIFGSRKFINTLIMKFIFFKASLITCDAIHISKLISKISPIANPKIINF GIDSSFFVGSISNYIDEKSINIISTRNHEQIYNLETLINTSKNLKNNNIDFALTIAGYGSQTEKLIKKSNDLGLIKKVRF IGKYDYETLPELLNKHDLFISTSLSDAGIASSIAEAMACQKIVIVSDSGENKLWISNGYNGFLFKTGCSKSLYNTIIKAI DRKHLWKKIGIRARETILERNDISNEMKKMGKLMDLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 40913; Mature: 40913
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00238 OPSIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILYLAPGNSIHSKKWIEKIKSLYPNNNYFWFSYEKFQYEINNEISIFSISGKNKFRLI CEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEEEECCCCCHHHH RIIKCIFKIRKLQKKNNFDLIHIHSVGTYGIFAIIPILFNIPFIVTPWGSDIIFGSRKFI HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCEEECCHHHH NTLIMKFIFFKASLITCDAIHISKLISKISPIANPKIINFGIDSSFFVGSISNYIDEKSI HHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCE NIISTRNHEQIYNLETLINTSKNLKNNNIDFALTIAGYGSQTEKLIKKSNDLGLIKKVRF EEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHH IGKYDYETLPELLNKHDLFISTSLSDAGIASSIAEAMACQKIVIVSDSGENKLWISNGYN HCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCEEEEEECCCCCEEEEECCCC GFLFKTGCSKSLYNTIIKAIDRKHLWKKIGIRARETILERNDISNEMKKMGKLMDLV EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure MKILYLAPGNSIHSKKWIEKIKSLYPNNNYFWFSYEKFQYEINNEISIFSISGKNKFRLI CEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEEEECCCCCHHHH RIIKCIFKIRKLQKKNNFDLIHIHSVGTYGIFAIIPILFNIPFIVTPWGSDIIFGSRKFI HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCEEECCHHHH NTLIMKFIFFKASLITCDAIHISKLISKISPIANPKIINFGIDSSFFVGSISNYIDEKSI HHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCE NIISTRNHEQIYNLETLINTSKNLKNNNIDFALTIAGYGSQTEKLIKKSNDLGLIKKVRF EEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHH IGKYDYETLPELLNKHDLFISTSLSDAGIASSIAEAMACQKIVIVSDSGENKLWISNGYN HCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCEEEEEECCCCCEEEEECCCC GFLFKTGCSKSLYNTIIKAIDRKHLWKKIGIRARETILERNDISNEMKKMGKLMDLV EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]