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The map label for this gene is glyQ

Identifier: 78779648

GI number: 78779648

Start: 1177541

End: 1178353

Strand: Reverse

Name: glyQ

Synonym: PMT9312_1265

Alternate gene names: 78779648

Gene position: 1178353-1177541 (Counterclockwise)

Preceding gene: 78779649

Following gene: 78779647

Centisome position: 68.94

GC content: 36.16

Gene sequence:

>813_bases
ATGCAGCCTTACGATACTGAAAAGGGTGCTGGCACAATGAATCCTCATACCTTTTTGAGGGCTATTGGACCGGAACCTTG
GTCGGTTGCATATGCCGAGCCATGTAGAAGACCAACAGACGGAAGATTTGGAGATAATCCTAATCGTGCTCAACATTACT
TTCAATATCAAGTAATAATTAAGCCTTCCCCTGATGGGATTCAAGAAAAATATTTAAAATGTCTGGAATCTCTTGGAATA
GAACCTAAAAATCATGACATAAGATTTGTTGAAGATAATTGGGAGTCGCCAACTCTTGGAGCTTGGGGAGTGGGTTGGGA
AGTATGGCTAGACGGAATGGAAGTTACTCAATTCACCTATTTTCAGCAATGCGGAGGGTTTGATTGTAATCCAATCCCAA
TTGAAATCACCTTTGGATTAGAGAGAATTGCAATGTTTTTGCAGGATAAGGAAAGTATCTGGGACTTAAGTTGGAACAAA
AATTTGAAATATAGTGATATTTGGCTTCAATTTGAAAAAAGTCAATGCGAATATAATTTTACTGAATCTAATCCTGATAA
TCTGAGGAAATTATTTGAAATTTACCAAGAAGAGGCAAATTCTTTAATAGAAAAGAAATTAACATATCCCGCGCTTGATT
TTGTTCTGAAATGTAGTCATACTTTTAATCTGCTCGATGCCAGGGGAGTTATTTCAGTTACAGACCGTGCTCAATATATT
GAAAAGATTAGAAAATTAGCAAGAGAAGTTGCATCATCTTGGAGAGAGGAAAGAGAATTTTTGGGATATCCACTAATAAA
AAAAGTAAATTAA

Upstream 100 bases:

>100_bases
ATGGCATTGATCTAAATTTTTCACTTTTTAAAAATTGATGTTTTTTCAGGATATAATTCAAAATCTAAATAATTTTTGGT
CTAAAGAAGGTTGTTTGATT

Downstream 100 bases:

>100_bases
CAAATCAAAAAATATTGATATGTCAAATATTCTTGATATATGGAAAGTATCAATGGTTACATCTCCTTGAAACTTTTATA
TCATTTCAAGATTGTTTCTT

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVIIKPSPDGIQEKYLKCLESLGI
EPKNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGFDCNPIPIEITFGLERIAMFLQDKESIWDLSWNK
NLKYSDIWLQFEKSQCEYNFTESNPDNLRKLFEIYQEEANSLIEKKLTYPALDFVLKCSHTFNLLDARGVISVTDRAQYI
EKIRKLAREVASSWREEREFLGYPLIKKVN

Sequences:

>Translated_270_residues
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVIIKPSPDGIQEKYLKCLESLGI
EPKNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGFDCNPIPIEITFGLERIAMFLQDKESIWDLSWNK
NLKYSDIWLQFEKSQCEYNFTESNPDNLRKLFEIYQEEANSLIEKKLTYPALDFVLKCSHTFNLLDARGVISVTDRAQYI
EKIRKLAREVASSWREEREFLGYPLIKKVN
>Mature_270_residues
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVIIKPSPDGIQEKYLKCLESLGI
EPKNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGFDCNPIPIEITFGLERIAMFLQDKESIWDLSWNK
NLKYSDIWLQFEKSQCEYNFTESNPDNLRKLFEIYQEEANSLIEKKLTYPALDFVLKCSHTFNLLDARGVISVTDRAQYI
EKIRKLAREVASSWREEREFLGYPLIKKVN

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=274, Percent_Identity=56.2043795620438, Blast_Score=325, Evalue=2e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 31575; Mature: 31575

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVII
CCCCCCCCCCCCCCHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCHHHEEEEEEEEE
KPSPDGIQEKYLKCLESLGIEPKNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTY
ECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHH
FQQCGGFDCNPIPIEITFGLERIAMFLQDKESIWDLSWNKNLKYSDIWLQFEKSQCEYNF
HHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHHEECCCCCCCCEEEEEEEEECCCCCCCC
TESNPDNLRKLFEIYQEEANSLIEKKLTYPALDFVLKCSHTFNLLDARGVISVTDRAQYI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCEECCCCEEEEHHHHHHH
EKIRKLAREVASSWREEREFLGYPLIKKVN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQPYDTEKGAGTMNPHTFLRAIGPEPWSVAYAEPCRRPTDGRFGDNPNRAQHYFQYQVII
CCCCCCCCCCCCCCHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCHHHEEEEEEEEE
KPSPDGIQEKYLKCLESLGIEPKNHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTY
ECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHH
FQQCGGFDCNPIPIEITFGLERIAMFLQDKESIWDLSWNKNLKYSDIWLQFEKSQCEYNF
HHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHHEECCCCCCCCEEEEEEEEECCCCCCCC
TESNPDNLRKLFEIYQEEANSLIEKKLTYPALDFVLKCSHTFNLLDARGVISVTDRAQYI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCEECCCCEEEEHHHHHHH
EKIRKLAREVASSWREEREFLGYPLIKKVN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA